RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 CDCA4Q9BXL8 241 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 HES7Q9BYE0 225 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 DPY30Q9C005 99 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 LAT2Q9GZY6 243 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 Q9H521 79 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 ESRP2Q9H6T0 727 aaKnown RBP1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 NANOGQ9H9S0 305 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 NMNAT1Q9HAN9 279 aaPredicted RBP1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 TPT1P8Q9HAU6 139 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 RETNQ9HD89 108 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 DNAJC4Q9NNZ3 241 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 ENY2Q9NPA8 101 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 A4GALTQ9NPC4 353 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 EXOSC3Q9NQT5 275 aaKnown RBP1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 SLC17A5Q9NRA2 495 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 DCAF13Q9NV06 445 aaKnown RBP1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 KLRF1Q9NZS2 232 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 FLRT3Q9NZU0 649 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 OR1A1Q9P1Q5 309 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 ARMCX1Q9P291 453 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 COPZ2Q9P299 210 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 TMEM181Q9P2C4 612 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 PRODH2Q9UF12 536 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 C19orf25Q9UFG5 118 aaPredicted RBP1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 SS18L2Q9UHA2 77 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 SMPXQ9UHP9 88 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 HHLA2Q9UM44 414 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 ING4Q9UNL4 249 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 RNF6Q9Y252 685 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 ZNF835Q9Y2P0 537 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 YARS2Q9Y2Z4 477 aaKnown RBP1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 UFC1Q9Y3C8 167 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 MRPS18CQ9Y3D5 142 aaKnown RBP1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 FIS1Q9Y3D6 152 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 TIMM10BQ9Y5J6 103 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 CEPT1Q9Y6K0 416 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 MYO9AB2RTY4 2548 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 CCDC168Q8NDH2 2452 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 CMYA5Q8N3K9 4069 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 NSD1Q96L73 2696 aaPredicted RBP1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 ABCA2Q9BZC7 2435 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 HIVEP1P15822 2718 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 ITPR3Q14573 2671 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 ANKRD17O75179 2603 aaKnown RBP1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 CACNA1DQ01668 2161 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 IGKV1D-42A0A075B6H8 117 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 TRAV8-7A0A075B6U6 113 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 TRAV17A0A0B4J275 112 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 PPIAL4CA0A0B4J2A2 164 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 A0A0B4J2E0 115 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 A0A0G2JND7 137 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 KIR2DS1A0A191URI9 304 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 A0A1B0GX12 115 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 TCRBV3S1A0A5B6 114 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 ISPDA4D126 451 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 OR5H15A6NDH6 313 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 OR6C6A6NF89 314 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 SMIM9A6NGZ8 99 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 FAM74A7A6NL05 159 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 CLDN24A6NM45 220 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 TRDCB7Z8K6 153 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 E5RGE8 158 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 PPP5D1E7EU14 171 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 F6UZH7 168 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 KRTAP4-16G5E9R7 235 aaPredicted RBP1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 H0YL77 283 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 TRAPPC2LH3BP13 241 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 J3QLI3 93 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 K7EP13 123 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 SLC17A3O00476 420 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 VCYO14598 125 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 TNFSF11O14788 317 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 FFAR1O14842 300 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 PHF1O43189 567 aaPredicted RBP1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 TPST1O60507 370 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 ICOSLGO75144 302 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 GGCTO75223 188 aaKnown RBP1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 MPDU1O75352 247 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 TRAPPC6AO75865 159 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 ATP5LO75964 103 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 ZFAND5O76080 213 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 SLC22A5O76082 557 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 MPZL1O95297 269 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 ZNF682O95780 498 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 PTTG1O95997 202 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 IFNA1P01562 189 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 ARG1P05089 322 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 ISG15P05161 165 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 HPNP05981 417 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 BCHEP06276 602 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 WNT2P09544 360 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 CSF3P09919 207 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 OR8U8P0C7N1 319 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 METTL15P1P0C7V9 234 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 SMIM18P0DKX4 95 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 PPIAL4GP0DN37 164 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 OR13C7P0DN81 318 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 HIST1H1EP10412 219 aaKnown RBP1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 UQCRBP14927 111 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 ABOP16442 354 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms