RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 OVCH2Q7RTZ1 564 aa11.66□□□□□ -0.54
CD4-208ENST00000538827 CENPSQ8N2Z9 138 aa11.66□□□□□ -0.54
CD4-208ENST00000538827 OR52L2PQ8NGH6 319 aa11.66□□□□□ -0.54
CD4-208ENST00000538827 TOMM40LQ969M1 308 aa11.66□□□□□ -0.54
CD4-208ENST00000538827 FXYD6Q9H0Q3 95 aa11.66□□□□□ -0.54
CD4-208ENST00000538827 MMP28Q9H239 520 aa11.66□□□□□ -0.54
CD4-208ENST00000538827 LPAR2Q9HBW0 351 aa11.66□□□□□ -0.54
CD4-208ENST00000538827 TAS2R3Q9NYW6 316 aa11.66□□□□□ -0.54
CD4-208ENST00000538827 IDI2-AS1Q9NZ38 188 aa11.66□□□□□ -0.54
CD4-208ENST00000538827 GNG12Q9UBI6 72 aa11.66□□□□□ -0.54
CD4-208ENST00000538827 OPN4Q9UHM6 478 aa11.66□□□□□ -0.54
CD4-208ENST00000538827 RPUSD1Q9UJJ7 312 aaKnown RBP11.66□□□□□ -0.54
CD4-208ENST00000538827 PPIAL4CA0A0B4J2A2 164 aa11.65□□□□□ -0.54
CD4-208ENST00000538827 KBTBD11-OT1A0A1B0GTJ5 212 aa11.65□□□□□ -0.54
CD4-208ENST00000538827 A0A1W2PPH5 198 aa11.65□□□□□ -0.54
CD4-208ENST00000538827 GPR37O15354 613 aa11.65□□□□□ -0.54
CD4-208ENST00000538827 PPIAL4GP0DN37 164 aa11.65□□□□□ -0.54
CD4-208ENST00000538827 AADACP22760 399 aa11.65□□□□□ -0.54
CD4-208ENST00000538827 PPP1CCP36873 323 aaKnown RBP11.65□□□□□ -0.54
CD4-208ENST00000538827 LMO4P61968 165 aa11.65□□□□□ -0.54
CD4-208ENST00000538827 RBMS2Q15434 407 aaKnown RBP11.65□□□□□ -0.54
CD4-208ENST00000538827 CD276Q5ZPR3 534 aa11.65□□□□□ -0.54
CD4-208ENST00000538827 PLET1Q6UQ28 207 aa11.65□□□□□ -0.54
CD4-208ENST00000538827 ZNF554Q86TJ5 538 aa11.65□□□□□ -0.54
CD4-208ENST00000538827 MINDY2Q8NBR6 621 aa11.65□□□□□ -0.54
CD4-208ENST00000538827 OR6F1Q8NGZ6 308 aa11.65□□□□□ -0.54
CD4-208ENST00000538827 CORO2AQ92828 525 aa11.65□□□□□ -0.54
CD4-208ENST00000538827 C20orf85Q9H1P6 137 aa11.65□□□□□ -0.54
CD4-208ENST00000538827 OR2S2Q9NQN1 319 aa11.65□□□□□ -0.54
CD4-208ENST00000538827 SLC2A8Q9NY64 477 aa11.65□□□□□ -0.54
CD4-208ENST00000538827 RBM7Q9Y580 266 aaKnown RBP11.65□□□□□ -0.54
CD4-208ENST00000538827 MALRD1Q5VYJ5 2156 aa11.64□□□□□ -0.55
CD4-208ENST00000538827 TRAV6A0A075B6T7 132 aa11.64□□□□□ -0.55
CD4-208ENST00000538827 TRBV6-7A0A0A0MS04 114 aa11.64□□□□□ -0.55
CD4-208ENST00000538827 KIAA1324LA8MWY0 1029 aaPredicted RBP11.64□□□□□ -0.55
CD4-208ENST00000538827 FAM157AC9JC47 383 aa11.64□□□□□ -0.55
CD4-208ENST00000538827 ARPC1BO15143 372 aaKnown RBP11.64□□□□□ -0.55
CD4-208ENST00000538827 ENSAO43768 121 aaKnown RBP11.64□□□□□ -0.55
CD4-208ENST00000538827 FOXH1O75593 365 aa11.64□□□□□ -0.55
CD4-208ENST00000538827 ZNF728P0DKX0 622 aa11.64□□□□□ -0.55
CD4-208ENST00000538827 USF1P22415 310 aaPredicted RBP11.64□□□□□ -0.55
CD4-208ENST00000538827 ZBTB25P24278 435 aa11.64□□□□□ -0.55
CD4-208ENST00000538827 SLC6A1P30531 599 aa11.64□□□□□ -0.55
CD4-208ENST00000538827 PLA1AQ53H76 456 aa11.64□□□□□ -0.55
CD4-208ENST00000538827 FAM53AQ6NSI3 398 aaPredicted RBP11.64□□□□□ -0.55
CD4-208ENST00000538827 CCBE1Q6UXH8 406 aaPredicted RBP11.64□□□□□ -0.55
CD4-208ENST00000538827 PRIMA1Q86XR5 153 aa11.64□□□□□ -0.55
CD4-208ENST00000538827 H1FOOQ8IZA3 346 aaPredicted RBP11.64□□□□□ -0.55
CD4-208ENST00000538827 CHPT1Q8WUD6 406 aa11.64□□□□□ -0.55
CD4-208ENST00000538827 Q96MF0 132 aa11.64□□□□□ -0.55
CD4-208ENST00000538827 NUDT15Q9NV35 164 aa11.64□□□□□ -0.55
CD4-208ENST00000538827 RDH8Q9NYR8 311 aa11.64□□□□□ -0.55
CD4-208ENST00000538827 JPT1Q9UK76 154 aa11.64□□□□□ -0.55
CD4-208ENST00000538827 KCNS2Q9ULS6 477 aa11.64□□□□□ -0.55
CD4-208ENST00000538827 NUBP2Q9Y5Y2 271 aa11.64□□□□□ -0.55
CD4-208ENST00000538827 ARHGAP32A7KAX9 2087 aa11.63□□□□□ -0.55
CD4-208ENST00000538827 OR5H14A6NHG9 310 aa11.63□□□□□ -0.55
CD4-208ENST00000538827 A8MXK9 166 aa11.63□□□□□ -0.55
CD4-208ENST00000538827 F2RL2O00254 374 aa11.63□□□□□ -0.55
CD4-208ENST00000538827 NDUFB6O95139 128 aa11.63□□□□□ -0.55
CD4-208ENST00000538827 PPYP01298 95 aa11.63□□□□□ -0.55
CD4-208ENST00000538827 IGHV3-7P01780 117 aa11.63□□□□□ -0.55
CD4-208ENST00000538827 TCRBP04435 133 aa11.63□□□□□ -0.55
CD4-208ENST00000538827 RLN1P04808 185 aa11.63□□□□□ -0.55
CD4-208ENST00000538827 LIPFP07098 398 aa11.63□□□□□ -0.55
CD4-208ENST00000538827 FPR2P25090 351 aa11.63□□□□□ -0.55
CD4-208ENST00000538827 ZFP36P26651 326 aaKnown RBP11.63□□□□□ -0.55
CD4-208ENST00000538827 CEACAM6P40199 344 aa11.63□□□□□ -0.55
CD4-208ENST00000538827 GNG10P50151 68 aa11.63□□□□□ -0.55
CD4-208ENST00000538827 RAB25P57735 213 aa11.63□□□□□ -0.55
CD4-208ENST00000538827 BAMBIQ13145 260 aa11.63□□□□□ -0.55
CD4-208ENST00000538827 OXA1LQ15070 435 aa11.63□□□□□ -0.55
CD4-208ENST00000538827 CR1LQ2VPA4 569 aa11.63□□□□□ -0.55
CD4-208ENST00000538827 TMED4Q7Z7H5 227 aa11.63□□□□□ -0.55
CD4-208ENST00000538827 OR13C8Q8NGS7 320 aa11.63□□□□□ -0.55
CD4-208ENST00000538827 C8orf46Q8TAG6 207 aa11.63□□□□□ -0.55
CD4-208ENST00000538827 MARCH1Q8TCQ1 289 aa11.63□□□□□ -0.55
CD4-208ENST00000538827 SECTM1Q8WVN6 248 aa11.63□□□□□ -0.55
CD4-208ENST00000538827 LEAP2Q969E1 77 aa11.63□□□□□ -0.55
CD4-208ENST00000538827 UPRTQ96BW1 309 aa11.63□□□□□ -0.55
CD4-208ENST00000538827 SUCNR1Q9BXA5 334 aa11.63□□□□□ -0.55
CD4-208ENST00000538827 PARP12Q9H0J9 701 aaKnown RBP11.63□□□□□ -0.55
CD4-208ENST00000538827 GFOD1Q9NXC2 390 aa11.63□□□□□ -0.55
CD4-208ENST00000538827 COPZ2Q9P299 210 aa11.63□□□□□ -0.55
CD4-208ENST00000538827 FLVCR2Q9UPI3 526 aa11.63□□□□□ -0.55
CD4-208ENST00000538827 NPIPB11E5RHQ5 1161 aa11.62□□□□□ -0.55
CD4-208ENST00000538827 RNF223E7ERA6 249 aa11.62□□□□□ -0.55
CD4-208ENST00000538827 MMP23AO75900 390 aa11.62□□□□□ -0.55
CD4-208ENST00000538827 RGS11O94810 467 aa11.62□□□□□ -0.55
CD4-208ENST00000538827 H2AFB2P0C5Z0 115 aa11.62□□□□□ -0.55
CD4-208ENST00000538827 CGB3P0DN86 165 aa11.62□□□□□ -0.55
CD4-208ENST00000538827 CGB7P0DN87 165 aa11.62□□□□□ -0.55
CD4-208ENST00000538827 ERVFRD-1P60508 538 aa11.62□□□□□ -0.55
CD4-208ENST00000538827 HTD2P86397 168 aa11.62□□□□□ -0.55
CD4-208ENST00000538827 TMEM30BQ3MIR4 351 aa11.62□□□□□ -0.55
CD4-208ENST00000538827 LHFPL1Q86WI0 220 aa11.62□□□□□ -0.55
CD4-208ENST00000538827 TERB2Q8NHR7 220 aa11.62□□□□□ -0.55
CD4-208ENST00000538827 DACT3Q96B18 629 aaPredicted RBP11.62□□□□□ -0.55
CD4-208ENST00000538827 CREB3L1Q96BA8 519 aa11.62□□□□□ -0.55
CD4-208ENST00000538827 MOB3AQ96BX8 217 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms