RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 IL17BQ9UHF5 180 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 LNP1A1A4G5 178 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 SHISA7A6NL88 538 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 ZNF205O95201 554 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 CAPZBP47756 277 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 ERVS71-1P61550 626 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 MRPS34P82930 218 aaKnown RBP7.76□□□□□ -1.17
SNHG1-209ENST00000538654 MYBPHQ13203 477 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 MFAP5Q13361 173 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 NSDHLQ15738 373 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 TMEM41BQ5BJD5 291 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 CST9LP1Q5W188 147 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 ASCL4Q6XD76 172 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 TMEM37Q8WXS4 190 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 OXGR1Q96P68 337 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 PCGF1Q9BSM1 259 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 FUT9Q9Y231 359 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 MRPS18CQ9Y3D5 142 aaKnown RBP7.76□□□□□ -1.17
SNHG1-209ENST00000538654 E9PLN8 166 aa7.75□□□□□ -1.17
SNHG1-209ENST00000538654 F5H5K5 113 aa7.75□□□□□ -1.17
SNHG1-209ENST00000538654 TRAF3IP2O43734 574 aaPredicted RBP7.75□□□□□ -1.17
SNHG1-209ENST00000538654 ZNF737O75373 536 aa7.75□□□□□ -1.17
SNHG1-209ENST00000538654 TMEM50AO95807 157 aa7.75□□□□□ -1.17
SNHG1-209ENST00000538654 HLA-HP01893 362 aa7.75□□□□□ -1.17
SNHG1-209ENST00000538654 SLC25A6P12236 298 aa7.75□□□□□ -1.17
SNHG1-209ENST00000538654 MSR1P21757 451 aa7.75□□□□□ -1.17
SNHG1-209ENST00000538654 ANOS1P23352 680 aa7.75□□□□□ -1.17
SNHG1-209ENST00000538654 MSX1P28360 303 aa7.75□□□□□ -1.17
SNHG1-209ENST00000538654 GNRHRP30968 328 aa7.75□□□□□ -1.17
SNHG1-209ENST00000538654 MDH2P40926 338 aaKnown RBP7.75□□□□□ -1.17
SNHG1-209ENST00000538654 RPL29P47914 159 aaKnown RBP7.75□□□□□ -1.17
SNHG1-209ENST00000538654 MEF2BQ02080 365 aaPredicted RBP7.75□□□□□ -1.17
SNHG1-209ENST00000538654 SCGB2A2Q13296 93 aa7.75□□□□□ -1.17
SNHG1-209ENST00000538654 SPIN3Q5JUX0 258 aa7.75□□□□□ -1.17
SNHG1-209ENST00000538654 CARD17Q5XLA6 110 aa7.75□□□□□ -1.17
SNHG1-209ENST00000538654 ZNF705AQ6ZN79 300 aaPredicted RBP7.75□□□□□ -1.17
SNHG1-209ENST00000538654 OSR2Q8N2R0 312 aa7.75□□□□□ -1.17
SNHG1-209ENST00000538654 NECAP1Q8NC96 275 aa7.75□□□□□ -1.17
SNHG1-209ENST00000538654 OR5D13Q8NGL4 314 aa7.75□□□□□ -1.17
SNHG1-209ENST00000538654 SPTSSAQ969W0 71 aa7.75□□□□□ -1.17
SNHG1-209ENST00000538654 SPSB4Q96A44 273 aa7.75□□□□□ -1.17
SNHG1-209ENST00000538654 C20orf144Q9BQM9 153 aa7.75□□□□□ -1.17
SNHG1-209ENST00000538654 CHRNA10Q9GZZ6 450 aa7.75□□□□□ -1.17
SNHG1-209ENST00000538654 RNF115Q9Y4L5 304 aa7.75□□□□□ -1.17
SNHG1-209ENST00000538654 ATG2BQ96BY7 2078 aa7.75□□□□□ -1.17
SNHG1-209ENST00000538654 A0A1W2PPQ1 181 aa7.75□□□□□ -1.17
SNHG1-209ENST00000538654 SOX15O60248 233 aa7.75□□□□□ -1.17
SNHG1-209ENST00000538654 PDCD6O75340 191 aa7.75□□□□□ -1.17
SNHG1-209ENST00000538654 CD55P08174 381 aa7.75□□□□□ -1.17
SNHG1-209ENST00000538654 EN2P19622 333 aaPredicted RBP7.75□□□□□ -1.17
SNHG1-209ENST00000538654 GZMHP20718 246 aa7.75□□□□□ -1.17
SNHG1-209ENST00000538654 S100GP29377 79 aa7.75□□□□□ -1.17
SNHG1-209ENST00000538654 PSMB3P49720 205 aa7.75□□□□□ -1.17
SNHG1-209ENST00000538654 EFNA3P52797 238 aa7.75□□□□□ -1.17
SNHG1-209ENST00000538654 FBXW4P57775 412 aa7.75□□□□□ -1.17
SNHG1-209ENST00000538654 RPL23P62829 140 aaKnown RBP7.75□□□□□ -1.17
SNHG1-209ENST00000538654 MYO7BQ6PIF6 2116 aa7.75□□□□□ -1.17
SNHG1-209ENST00000538654 C17orf78Q8N4C9 275 aa7.75□□□□□ -1.17
SNHG1-209ENST00000538654 MIEN1Q9BRT3 115 aa7.75□□□□□ -1.17
SNHG1-209ENST00000538654 PLK3Q9H4B4 646 aa7.75□□□□□ -1.17
SNHG1-209ENST00000538654 GEMIN7Q9H840 131 aaKnown RBP7.75□□□□□ -1.17
SNHG1-209ENST00000538654 IL36GQ9NZH8 169 aa7.75□□□□□ -1.17
SNHG1-209ENST00000538654 CLEC1BQ9P126 229 aa7.75□□□□□ -1.17
SNHG1-209ENST00000538654 C2orf16Q68DN1 1984 aa7.74□□□□□ -1.17
SNHG1-209ENST00000538654 VENTXO95231 258 aa7.74□□□□□ -1.17
SNHG1-209ENST00000538654 HPRT1P00492 218 aa7.74□□□□□ -1.17
SNHG1-209ENST00000538654 TCN2P20062 427 aa7.74□□□□□ -1.17
SNHG1-209ENST00000538654 LBX1P52954 281 aa7.74□□□□□ -1.17
SNHG1-209ENST00000538654 ELLP55199 621 aaPredicted RBP7.74□□□□□ -1.17
SNHG1-209ENST00000538654 PAX9P55771 341 aa7.74□□□□□ -1.17
SNHG1-209ENST00000538654 HBG1P69891 147 aa7.74□□□□□ -1.17
SNHG1-209ENST00000538654 HBG2P69892 147 aa7.74□□□□□ -1.17
SNHG1-209ENST00000538654 SRSF7Q16629 238 aaKnown RBP eCLIP7.74□□□□□ -1.17
SNHG1-209ENST00000538654 SLC25A53Q5H9E4 307 aa7.74□□□□□ -1.17
SNHG1-209ENST00000538654 ZNF468Q5VIY5 522 aaPredicted RBP7.74□□□□□ -1.17
SNHG1-209ENST00000538654 Q6ZS49 121 aa7.74□□□□□ -1.17
SNHG1-209ENST00000538654 OR13H1Q8NG92 308 aa7.74□□□□□ -1.17
SNHG1-209ENST00000538654 PLPPR1Q8TBJ4 325 aa7.74□□□□□ -1.17
SNHG1-209ENST00000538654 MS4A10Q96PG2 267 aa7.74□□□□□ -1.17
SNHG1-209ENST00000538654 RBKSQ9H477 322 aa7.74□□□□□ -1.17
SNHG1-209ENST00000538654 LOC102725191A0A1B0GVB3 256 aa7.74□□□□□ -1.17
SNHG1-209ENST00000538654 FAM90A18PA6NE21 464 aa7.74□□□□□ -1.17
SNHG1-209ENST00000538654 FAM90A16PA6NEW6 464 aa7.74□□□□□ -1.17
SNHG1-209ENST00000538654 FAM90A9PA6NNJ1 464 aa7.74□□□□□ -1.17
SNHG1-209ENST00000538654 ZNF705FA8MVS1 300 aaPredicted RBP7.74□□□□□ -1.17
SNHG1-209ENST00000538654 FAM90A5PA8MXJ8 464 aa7.74□□□□□ -1.17
SNHG1-209ENST00000538654 B4DGG1 531 aa7.74□□□□□ -1.17
SNHG1-209ENST00000538654 ANGPTL7O43827 346 aa7.74□□□□□ -1.17
SNHG1-209ENST00000538654 CELA2BP08218 269 aaPredicted RBP7.74□□□□□ -1.17
SNHG1-209ENST00000538654 NPSP0C0P6 89 aa7.74□□□□□ -1.17
SNHG1-209ENST00000538654 FAM90A15PP0C7V4 464 aa7.74□□□□□ -1.17
SNHG1-209ENST00000538654 FAM90A14PP0C7W9 464 aa7.74□□□□□ -1.17
SNHG1-209ENST00000538654 ZNF705DP0CH99 300 aaPredicted RBP7.74□□□□□ -1.17
SNHG1-209ENST00000538654 ZNF705BP0CI00 300 aaPredicted RBP7.74□□□□□ -1.17
SNHG1-209ENST00000538654 OTX1P32242 354 aaPredicted RBP7.74□□□□□ -1.17
SNHG1-209ENST00000538654 UBE2NP61088 152 aaKnown RBP7.74□□□□□ -1.17
SNHG1-209ENST00000538654 ZNF92Q03936 586 aa7.74□□□□□ -1.17
SNHG1-209ENST00000538654 ZNF726P1Q15940 193 aa7.74□□□□□ -1.17
SNHG1-209ENST00000538654 C9orf50Q5SZB4 431 aa7.74□□□□□ -1.17
SNHG1-209ENST00000538654 BORCS8Q96FH0 119 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms