RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 FAM90A15PP0C7V4 464 aa15.89■□□□□ 0.13
SFSWAP-207ENST00000538548 FAM90A13PP0C7W8 464 aa15.89■□□□□ 0.13
SFSWAP-207ENST00000538548 FAM90A14PP0C7W9 464 aa15.89■□□□□ 0.13
SFSWAP-207ENST00000538548 FAM90A24PP0C7X0 464 aa15.89■□□□□ 0.13
SFSWAP-207ENST00000538548 S100GP29377 79 aa15.89■□□□□ 0.13
SFSWAP-207ENST00000538548 PLCXD3Q63HM9 321 aa15.89■□□□□ 0.13
SFSWAP-207ENST00000538548 BTNL3Q6UXE8 466 aa15.89■□□□□ 0.13
SFSWAP-207ENST00000538548 CARFQ8N187 725 aa15.89■□□□□ 0.13
SFSWAP-207ENST00000538548 OR1F12Q8NHA8 337 aa15.89■□□□□ 0.13
SFSWAP-207ENST00000538548 IMMP2LQ96T52 175 aa15.89■□□□□ 0.13
SFSWAP-207ENST00000538548 PSENENQ9NZ42 101 aa15.89■□□□□ 0.13
SFSWAP-207ENST00000538548 KIR2DS1A0A191URI9 304 aa15.88■□□□□ 0.13
SFSWAP-207ENST00000538548 SERPINE2P07093 398 aa15.88■□□□□ 0.13
SFSWAP-207ENST00000538548 CTXN2P0C2S0 81 aa15.88■□□□□ 0.13
SFSWAP-207ENST00000538548 KIR2DS4P43632 304 aa15.88■□□□□ 0.13
SFSWAP-207ENST00000538548 KIR2DS1Q14954 304 aa15.88■□□□□ 0.13
SFSWAP-207ENST00000538548 DEFB133Q30KQ1 61 aa15.88■□□□□ 0.13
SFSWAP-207ENST00000538548 HAPLN4Q86UW8 402 aa15.88■□□□□ 0.13
SFSWAP-207ENST00000538548 CALHM1Q8IU99 346 aa15.88■□□□□ 0.13
SFSWAP-207ENST00000538548 RPP25LQ8N5L8 163 aaKnown RBP15.88■□□□□ 0.13
SFSWAP-207ENST00000538548 ZNF611Q8N823 705 aa15.88■□□□□ 0.13
SFSWAP-207ENST00000538548 MMP17Q9ULZ9 603 aa15.88■□□□□ 0.13
SFSWAP-207ENST00000538548 VAMP5O95183 116 aa15.88■□□□□ 0.13
SFSWAP-207ENST00000538548 NPSP0C0P6 89 aa15.88■□□□□ 0.13
SFSWAP-207ENST00000538548 ZNF837Q96EG3 531 aaPredicted RBP15.88■□□□□ 0.13
SFSWAP-207ENST00000538548 WFIKKN1Q96NZ8 548 aa15.88■□□□□ 0.13
SFSWAP-207ENST00000538548 TECTBQ96PL2 329 aa15.88■□□□□ 0.13
SFSWAP-207ENST00000538548 SEMA5BQ9P283 1151 aa15.88■□□□□ 0.13
SFSWAP-207ENST00000538548 TP53I11O14683 189 aa15.87■□□□□ 0.13
SFSWAP-207ENST00000538548 VENTXO95231 258 aa15.87■□□□□ 0.13
SFSWAP-207ENST00000538548 HPRT1P00492 218 aa15.87■□□□□ 0.13
SFSWAP-207ENST00000538548 IGLV3-19P01714 112 aa15.87■□□□□ 0.13
SFSWAP-207ENST00000538548 ZNF705AQ6ZN79 300 aaPredicted RBP15.87■□□□□ 0.13
SFSWAP-207ENST00000538548 FADS6Q8N9I5 356 aa15.87■□□□□ 0.13
SFSWAP-207ENST00000538548 OR10J5Q8NHC4 309 aa15.87■□□□□ 0.13
SFSWAP-207ENST00000538548 MS4A10Q96PG2 267 aa15.87■□□□□ 0.13
SFSWAP-207ENST00000538548 hCG_38984A0A1B0GV85 526 aa15.87■□□□□ 0.13
SFSWAP-207ENST00000538548 IFNL4K9M1U5 179 aa15.87■□□□□ 0.13
SFSWAP-207ENST00000538548 IAPPP10997 89 aa15.87■□□□□ 0.13
SFSWAP-207ENST00000538548 OR1D5P58170 312 aa15.87■□□□□ 0.13
SFSWAP-207ENST00000538548 Q6ZRM9 215 aa15.87■□□□□ 0.13
SFSWAP-207ENST00000538548 DEFB119Q8N690 84 aa15.87■□□□□ 0.13
SFSWAP-207ENST00000538548 Q8NFD4 153 aa15.87■□□□□ 0.13
SFSWAP-207ENST00000538548 RLN3Q8WXF3 142 aa15.87■□□□□ 0.13
SFSWAP-207ENST00000538548 TAF15Q92804 592 aaKnown RBP eCLIP15.87■□□□□ 0.13
SFSWAP-207ENST00000538548 GYPAP02724 150 aa15.86■□□□□ 0.13
SFSWAP-207ENST00000538548 TESK1Q15569 626 aa15.86■□□□□ 0.13
SFSWAP-207ENST00000538548 PIGCQ92535 297 aa15.86■□□□□ 0.13
SFSWAP-207ENST00000538548 OR4C12Q96R67 309 aa15.86■□□□□ 0.13
SFSWAP-207ENST00000538548 MRPS18CQ9Y3D5 142 aaKnown RBP15.86■□□□□ 0.13
SFSWAP-207ENST00000538548 ASXL3Q9C0F0 2248 aa15.86■□□□□ 0.13
SFSWAP-207ENST00000538548 IGHV3-15A0A0B4J1V0 119 aa15.86■□□□□ 0.13
SFSWAP-207ENST00000538548 IGKV1-6A0A0C4DH72 117 aa15.86■□□□□ 0.13
SFSWAP-207ENST00000538548 IGKV1D-33P01593 117 aa15.86■□□□□ 0.13
SFSWAP-207ENST00000538548 IGKV1-33P01594 117 aa15.86■□□□□ 0.13
SFSWAP-207ENST00000538548 CLDN15P56746 228 aa15.86■□□□□ 0.13
SFSWAP-207ENST00000538548 RPL15P61313 204 aaKnown RBP15.86■□□□□ 0.13
SFSWAP-207ENST00000538548 IZUMO4Q1ZYL8 232 aa15.86■□□□□ 0.13
SFSWAP-207ENST00000538548 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.86■□□□□ 0.13
SFSWAP-207ENST00000538548 BATF2Q8N1L9 274 aa15.86■□□□□ 0.13
SFSWAP-207ENST00000538548 OR4F5Q8NH21 305 aa15.86■□□□□ 0.13
SFSWAP-207ENST00000538548 BTF3L4Q96K17 158 aa15.86■□□□□ 0.13
SFSWAP-207ENST00000538548 OR4F4Q96R69 305 aa15.86■□□□□ 0.13
SFSWAP-207ENST00000538548 MANBALQ9NQG1 85 aa15.86■□□□□ 0.13
SFSWAP-207ENST00000538548 FGF21Q9NSA1 209 aa15.86■□□□□ 0.13
SFSWAP-207ENST00000538548 CACNG5Q9UF02 275 aa15.86■□□□□ 0.13
SFSWAP-207ENST00000538548 TIMM9Q9Y5J7 89 aa15.86■□□□□ 0.13
SFSWAP-207ENST00000538548 ATP23Q9Y6H3 246 aa15.86■□□□□ 0.13
SFSWAP-207ENST00000538548 ABCA7Q8IZY2 2146 aa15.86■□□□□ 0.13
SFSWAP-207ENST00000538548 UNC13CQ8NB66 2214 aa15.86■□□□□ 0.13
SFSWAP-207ENST00000538548 PSG2P11465 335 aa15.85■□□□□ 0.13
SFSWAP-207ENST00000538548 CFHR1Q03591 330 aa15.85■□□□□ 0.13
SFSWAP-207ENST00000538548 PLXDC1Q8IUK5 500 aa15.85■□□□□ 0.13
SFSWAP-207ENST00000538548 ZCCHC14Q8WYQ9 949 aaKnown RBP15.85■□□□□ 0.13
SFSWAP-207ENST00000538548 LSM10Q969L4 123 aaKnown RBP15.85■□□□□ 0.13
SFSWAP-207ENST00000538548 ZNF501Q96CX3 271 aaPredicted RBP15.85■□□□□ 0.13
SFSWAP-207ENST00000538548 TBX15Q96SF7 602 aa15.85■□□□□ 0.13
SFSWAP-207ENST00000538548 ZNF816-ZNF321PA0A0X1KG74 233 aa15.85■□□□□ 0.13
SFSWAP-207ENST00000538548 A6NNC1 897 aa15.85■□□□□ 0.13
SFSWAP-207ENST00000538548 ZNF705FA8MVS1 300 aaPredicted RBP15.85■□□□□ 0.13
SFSWAP-207ENST00000538548 TOX3O15405 576 aaPredicted RBP15.85■□□□□ 0.13
SFSWAP-207ENST00000538548 ZNF705DP0CH99 300 aaPredicted RBP15.85■□□□□ 0.13
SFSWAP-207ENST00000538548 ZNF705BP0CI00 300 aaPredicted RBP15.85■□□□□ 0.13
SFSWAP-207ENST00000538548 IL3RAP26951 378 aa15.85■□□□□ 0.13
SFSWAP-207ENST00000538548 C21orf62-AS1Q17RA5 79 aa15.85■□□□□ 0.13
SFSWAP-207ENST00000538548 OR51H1Q8NH63 302 aa15.85■□□□□ 0.13
SFSWAP-207ENST00000538548 C20orf144Q9BQM9 153 aa15.85■□□□□ 0.13
SFSWAP-207ENST00000538548 IGLV3-12A0A075B6K2 115 aa15.84■□□□□ 0.13
SFSWAP-207ENST00000538548 IGHV1OR21-1A0A087WYE8 117 aa15.84■□□□□ 0.13
SFSWAP-207ENST00000538548 OR6C6A6NF89 314 aa15.84■□□□□ 0.13
SFSWAP-207ENST00000538548 CD300LBA8K4G0 201 aa15.84■□□□□ 0.13
SFSWAP-207ENST00000538548 TLE1Q04724 770 aa15.84■□□□□ 0.13
SFSWAP-207ENST00000538548 KRTAP27-1Q3LI81 207 aa15.84■□□□□ 0.13
SFSWAP-207ENST00000538548 TRIM61Q5EBN2 209 aa15.84■□□□□ 0.13
SFSWAP-207ENST00000538548 UCN2Q96RP3 112 aa15.84■□□□□ 0.13
SFSWAP-207ENST00000538548 TRAPPC1Q9Y5R8 145 aa15.84■□□□□ 0.13
SFSWAP-207ENST00000538548 CTXND1A0A1B0GTU2 59 aa15.84■□□□□ 0.13
SFSWAP-207ENST00000538548 ZFAND5O76080 213 aa15.84■□□□□ 0.13
SFSWAP-207ENST00000538548 IRF2P14316 349 aa15.84■□□□□ 0.13
SFSWAP-207ENST00000538548 WNT5AP41221 380 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms