RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 IFNA21P01568 189 aa11.8□□□□□ -0.52
ACTN1-205ENST00000538545 EPHA1P21709 976 aa11.8□□□□□ -0.52
ACTN1-205ENST00000538545 BTNL3Q6UXE8 466 aa11.8□□□□□ -0.52
ACTN1-205ENST00000538545 LEAP2Q969E1 77 aa11.8□□□□□ -0.52
ACTN1-205ENST00000538545 FAM210AQ96ND0 272 aa11.8□□□□□ -0.52
ACTN1-205ENST00000538545 CABLES2Q9BTV7 478 aa11.8□□□□□ -0.52
ACTN1-205ENST00000538545 MAP1AP78559 2803 aaPredicted RBP11.8□□□□□ -0.52
ACTN1-205ENST00000538545 A0A1B0GWJ7 208 aa11.8□□□□□ -0.52
ACTN1-205ENST00000538545 ZNF737O75373 536 aa11.8□□□□□ -0.52
ACTN1-205ENST00000538545 PTAFRP25105 342 aa11.8□□□□□ -0.52
ACTN1-205ENST00000538545 MDH2P40926 338 aaKnown RBP11.8□□□□□ -0.52
ACTN1-205ENST00000538545 CCDC71LQ8N9Z2 235 aa11.8□□□□□ -0.52
ACTN1-205ENST00000538545 ARL11Q969Q4 196 aa11.8□□□□□ -0.52
ACTN1-205ENST00000538545 C5orf30Q96GV9 206 aa11.8□□□□□ -0.52
ACTN1-205ENST00000538545 TMEM222Q9H0R3 208 aa11.8□□□□□ -0.52
ACTN1-205ENST00000538545 DNTTIP1Q9H147 329 aa11.8□□□□□ -0.52
ACTN1-205ENST00000538545 GYPAP02724 150 aa11.79□□□□□ -0.52
ACTN1-205ENST00000538545 GLAP06280 429 aa11.79□□□□□ -0.52
ACTN1-205ENST00000538545 HEXAP06865 529 aa11.79□□□□□ -0.52
ACTN1-205ENST00000538545 TUBG1P23258 451 aa11.79□□□□□ -0.52
ACTN1-205ENST00000538545 IL2RGP31785 369 aa11.79□□□□□ -0.52
ACTN1-205ENST00000538545 HMGN3Q15651 99 aa11.79□□□□□ -0.52
ACTN1-205ENST00000538545 SRSF7Q16629 238 aaKnown RBP eCLIP11.79□□□□□ -0.523e-14■■■■□ 24.7
ACTN1-205ENST00000538545 FAM90A1Q86YD7 464 aa11.79□□□□□ -0.52
ACTN1-205ENST00000538545 ZNF695Q8IW36 515 aa11.79□□□□□ -0.52
ACTN1-205ENST00000538545 LGI3Q8N145 548 aa11.79□□□□□ -0.52
ACTN1-205ENST00000538545 ABHD14BQ96IU4 210 aa11.79□□□□□ -0.52
ACTN1-205ENST00000538545 SUCNR1Q9BXA5 334 aa11.79□□□□□ -0.52
ACTN1-205ENST00000538545 GSX2Q9BZM3 304 aa11.79□□□□□ -0.52
ACTN1-205ENST00000538545 TUBG2Q9NRH3 451 aa11.79□□□□□ -0.52
ACTN1-205ENST00000538545 GLS2Q9UI32 602 aa11.79□□□□□ -0.52
ACTN1-205ENST00000538545 LEUTXA8MZ59 168 aa11.79□□□□□ -0.52
ACTN1-205ENST00000538545 ADAM20O43506 726 aa11.79□□□□□ -0.52
ACTN1-205ENST00000538545 CA7P43166 264 aa11.79□□□□□ -0.52
ACTN1-205ENST00000538545 SELENOVP59797 346 aa11.79□□□□□ -0.52
ACTN1-205ENST00000538545 CYCSP99999 105 aaKnown RBP11.79□□□□□ -0.52
ACTN1-205ENST00000538545 PRSS54Q6PEW0 395 aa11.79□□□□□ -0.52
ACTN1-205ENST00000538545 KDF1Q8NAX2 398 aaPredicted RBP11.79□□□□□ -0.52
ACTN1-205ENST00000538545 CNTNAP3BQ96NU0 1288 aa11.79□□□□□ -0.52
ACTN1-205ENST00000538545 CCL13Q99616 98 aa11.79□□□□□ -0.52
ACTN1-205ENST00000538545 CNTNAP3Q9BZ76 1288 aa11.79□□□□□ -0.52
ACTN1-205ENST00000538545 RHOFQ9HBH0 211 aa11.79□□□□□ -0.52
ACTN1-205ENST00000538545 VPS13CQ709C8 3753 aa11.79□□□□□ -0.52
ACTN1-205ENST00000538545 CTXN2P0C2S0 81 aa11.78□□□□□ -0.52
ACTN1-205ENST00000538545 ADORA2A-AS1P86434 159 aa11.78□□□□□ -0.52
ACTN1-205ENST00000538545 CXorf66Q5JRM2 361 aaPredicted RBP11.78□□□□□ -0.52
ACTN1-205ENST00000538545 DMRTC2Q8IXT2 367 aaPredicted RBP11.78□□□□□ -0.52
ACTN1-205ENST00000538545 SELENOHQ8IZQ5 122 aaKnown RBP11.78□□□□□ -0.52
ACTN1-205ENST00000538545 FAM216BQ8N7L0 139 aa11.78□□□□□ -0.52
ACTN1-205ENST00000538545 ASB13Q8WXK3 278 aa11.78□□□□□ -0.52
ACTN1-205ENST00000538545 ZDHHC8Q9ULC8 765 aa11.78□□□□□ -0.52
ACTN1-205ENST00000538545 FLNCQ14315 2725 aa11.78□□□□□ -0.52
ACTN1-205ENST00000538545 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.78□□□□□ -0.52
ACTN1-205ENST00000538545 A0A1W2PPE3 182 aa11.78□□□□□ -0.52
ACTN1-205ENST00000538545 BCL2L11O43521 198 aa11.78□□□□□ -0.52
ACTN1-205ENST00000538545 OR2F2O95006 317 aa11.78□□□□□ -0.52
ACTN1-205ENST00000538545 ACAA1P09110 424 aaPredicted RBP11.78□□□□□ -0.52
ACTN1-205ENST00000538545 OR2F1Q13607 317 aa11.78□□□□□ -0.52
ACTN1-205ENST00000538545 SLC51BQ86UW2 128 aa11.78□□□□□ -0.52
ACTN1-205ENST00000538545 CMTM1Q8IZ96 169 aa11.78□□□□□ -0.52
ACTN1-205ENST00000538545 OR2D2Q9H210 308 aa11.78□□□□□ -0.52
ACTN1-205ENST00000538545 ZC4H2Q9NQZ6 224 aa11.78□□□□□ -0.52
ACTN1-205ENST00000538545 A0A0D9SG52 128 aa11.78□□□□□ -0.52
ACTN1-205ENST00000538545 MED19A0JLT2 244 aaPredicted RBP11.78□□□□□ -0.52
ACTN1-205ENST00000538545 E7EQL1 145 aa11.78□□□□□ -0.52
ACTN1-205ENST00000538545 K7EPK0 472 aa11.78□□□□□ -0.52
ACTN1-205ENST00000538545 ST8SIA5O15466 376 aa11.78□□□□□ -0.52
ACTN1-205ENST00000538545 SIAH2O43255 324 aa11.78□□□□□ -0.52
ACTN1-205ENST00000538545 NMBP08949 121 aa11.78□□□□□ -0.52
ACTN1-205ENST00000538545 F2RP25116 425 aa11.78□□□□□ -0.52
ACTN1-205ENST00000538545 POLR2GP62487 172 aaKnown RBP eCLIP11.78□□□□□ -0.52
ACTN1-205ENST00000538545 FAM71E2Q8N5Q1 922 aa11.78□□□□□ -0.52
ACTN1-205ENST00000538545 DRAM1Q8N682 238 aa11.78□□□□□ -0.52
ACTN1-205ENST00000538545 ERGIC1Q969X5 290 aa11.78□□□□□ -0.52
ACTN1-205ENST00000538545 GALMQ96C23 342 aa11.78□□□□□ -0.52
ACTN1-205ENST00000538545 KCNIP1Q9NZI2 227 aa11.78□□□□□ -0.52
ACTN1-205ENST00000538545 UTP20O75691 2785 aaKnown RBP11.77□□□□□ -0.52
ACTN1-205ENST00000538545 CRYBG3Q68DQ2 2970 aa11.77□□□□□ -0.52
ACTN1-205ENST00000538545 SHISA9B4DS77 424 aa11.77□□□□□ -0.53
ACTN1-205ENST00000538545 LHBP01229 141 aa11.77□□□□□ -0.53
ACTN1-205ENST00000538545 IGKV1-39P01597 117 aa11.77□□□□□ -0.53
ACTN1-205ENST00000538545 IGKV1D-39P04432 117 aa11.77□□□□□ -0.53
ACTN1-205ENST00000538545 RPS23P62266 143 aaKnown RBP11.77□□□□□ -0.53
ACTN1-205ENST00000538545 TLE1Q04724 770 aa11.77□□□□□ -0.53
ACTN1-205ENST00000538545 SHEQ5VZ18 495 aa11.77□□□□□ -0.53
ACTN1-205ENST00000538545 ANGPTL6Q8NI99 470 aa11.77□□□□□ -0.53
ACTN1-205ENST00000538545 ARHGAP32A7KAX9 2087 aa11.77□□□□□ -0.53
ACTN1-205ENST00000538545 TANC2Q9HCD6 1990 aa11.77□□□□□ -0.53
ACTN1-205ENST00000538545 H7C1Q1 480 aa11.77□□□□□ -0.53
ACTN1-205ENST00000538545 HKR1P10072 659 aa11.77□□□□□ -0.53
ACTN1-205ENST00000538545 RPL30P62888 115 aaKnown RBP11.77□□□□□ -0.53
ACTN1-205ENST00000538545 ZNF345Q14585 488 aa11.77□□□□□ -0.53
ACTN1-205ENST00000538545 SLC35E4Q6ICL7 350 aa11.77□□□□□ -0.53
ACTN1-205ENST00000538545 CCL17Q92583 94 aa11.77□□□□□ -0.53
ACTN1-205ENST00000538545 CYTL1Q9NRR1 136 aa11.77□□□□□ -0.53
ACTN1-205ENST00000538545 RAMP3O60896 148 aa11.76□□□□□ -0.53
ACTN1-205ENST00000538545 DEDDO75618 318 aa11.76□□□□□ -0.53
ACTN1-205ENST00000538545 C4BPBP20851 252 aa11.76□□□□□ -0.53
ACTN1-205ENST00000538545 C3orf36Q3SXR2 165 aa11.76□□□□□ -0.53
ACTN1-205ENST00000538545 C1QTNF12Q5T7M4 302 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms