RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 FLI1Q01543 452 aaPredicted RBP21.03■□□□□ 0.96
RAB40C-204ENST00000538492 FOXF2Q12947 444 aa21.03■□□□□ 0.96
RAB40C-204ENST00000538492 GUSBP1Q15486 140 aa21.03■□□□□ 0.96
RAB40C-204ENST00000538492 NBEAQ8NFP9 2946 aa21.02■□□□□ 0.96
RAB40C-204ENST00000538492 MLNRO43193 412 aa21.02■□□□□ 0.96
RAB40C-204ENST00000538492 PSPNO60542 156 aa21.02■□□□□ 0.96
RAB40C-204ENST00000538492 HAND1O96004 215 aa21.02■□□□□ 0.96
RAB40C-204ENST00000538492 TFF1P04155 84 aa21.01■□□□□ 0.95
RAB40C-204ENST00000538492 LMO1P25800 156 aa21.01■□□□□ 0.95
RAB40C-204ENST00000538492 SAV1Q9H4B6 383 aaPredicted RBP21.01■□□□□ 0.95
RAB40C-204ENST00000538492 CACNG5Q9UF02 275 aa21.01■□□□□ 0.95
RAB40C-204ENST00000538492 CACNA1DQ01668 2161 aa21.01■□□□□ 0.95
RAB40C-204ENST00000538492 INTS1Q8N201 2190 aaKnown RBP21.01■□□□□ 0.95
RAB40C-204ENST00000538492 A0A1B0GU03 582 aa21.01■□□□□ 0.95
RAB40C-204ENST00000538492 CNOT4O95628 575 aaKnown RBP21.01■□□□□ 0.95
RAB40C-204ENST00000538492 MMP9P14780 707 aa21.01■□□□□ 0.95
RAB40C-204ENST00000538492 RXFP4Q8TDU9 374 aa21.01■□□□□ 0.95
RAB40C-204ENST00000538492 CBR1P16152 277 aa21■□□□□ 0.95
RAB40C-204ENST00000538492 CCL20P78556 96 aa21■□□□□ 0.95
RAB40C-204ENST00000538492 BAXQ07812 192 aa21■□□□□ 0.95
RAB40C-204ENST00000538492 TMEM267Q0VDI3 215 aaPredicted RBP21■□□□□ 0.95
RAB40C-204ENST00000538492 ZNF295-AS1Q8N0V1 137 aa21■□□□□ 0.95
RAB40C-204ENST00000538492 WDR31Q8NA23 367 aa21■□□□□ 0.95
RAB40C-204ENST00000538492 C20orf24Q9BUV8 137 aa21■□□□□ 0.95
RAB40C-204ENST00000538492 MBNL3Q9NUK0 354 aaKnown RBP21■□□□□ 0.95
RAB40C-204ENST00000538492 IGKV3-15P01624 115 aa21■□□□□ 0.95
RAB40C-204ENST00000538492 HEXAP06865 529 aa21■□□□□ 0.95
RAB40C-204ENST00000538492 SHEQ5VZ18 495 aa21■□□□□ 0.95
RAB40C-204ENST00000538492 BCL2L14Q9BZR8 327 aa21■□□□□ 0.95
RAB40C-204ENST00000538492 RPS10P5Q9NQ39 176 aa21■□□□□ 0.95
RAB40C-204ENST00000538492 TRAV17A0A0B4J275 112 aa20.99■□□□□ 0.95
RAB40C-204ENST00000538492 KIAA1324LA8MWY0 1029 aaPredicted RBP20.99■□□□□ 0.95
RAB40C-204ENST00000538492 RARRES2Q99969 163 aa20.99■□□□□ 0.95
RAB40C-204ENST00000538492 A6NLC8 198 aa20.99■□□□□ 0.95
RAB40C-204ENST00000538492 AQP7O14520 342 aa20.99■□□□□ 0.95
RAB40C-204ENST00000538492 IGKV1-5P01602 117 aa20.99■□□□□ 0.95
RAB40C-204ENST00000538492 FABP6P51161 128 aa20.99■□□□□ 0.95
RAB40C-204ENST00000538492 DEFB109BQ30KR1 87 aa20.99■□□□□ 0.95
RAB40C-204ENST00000538492 FAM53AQ6NSI3 398 aaPredicted RBP20.99■□□□□ 0.95
RAB40C-204ENST00000538492 UFSP2Q9NUQ7 469 aa20.99■□□□□ 0.95
RAB40C-204ENST00000538492 WIPI2Q9Y4P8 454 aa20.99■□□□□ 0.95
RAB40C-204ENST00000538492 TMEM210A6NLX4 147 aa20.98■□□□□ 0.95
RAB40C-204ENST00000538492 HMGN3Q15651 99 aa20.98■□□□□ 0.95
RAB40C-204ENST00000538492 PRAMEF6Q5VXH4 476 aa20.98■□□□□ 0.95
RAB40C-204ENST00000538492 IGFL2Q6UWQ7 119 aa20.98■□□□□ 0.95
RAB40C-204ENST00000538492 OR8G5Q8NG78 346 aa20.98■□□□□ 0.95
RAB40C-204ENST00000538492 PBDC1Q9BVG4 233 aa20.98■□□□□ 0.95
RAB40C-204ENST00000538492 PRELID3BQ9Y3B1 194 aa20.98■□□□□ 0.95
RAB40C-204ENST00000538492 HEATR1Q9H583 2144 aaKnown RBP20.98■□□□□ 0.95
RAB40C-204ENST00000538492 MEX3AA1L020 520 aaKnown RBP20.98■□□□□ 0.95
RAB40C-204ENST00000538492 SNRNP70P08621 437 aaKnown RBP20.98■□□□□ 0.95
RAB40C-204ENST00000538492 OR13C7P0DN81 318 aa20.98■□□□□ 0.95
RAB40C-204ENST00000538492 ZNF585BQ52M93 769 aa20.98■□□□□ 0.95
RAB40C-204ENST00000538492 AWAT1Q58HT5 328 aa20.98■□□□□ 0.95
RAB40C-204ENST00000538492 STX12Q86Y82 276 aa20.98■□□□□ 0.95
RAB40C-204ENST00000538492 C11orf53Q8IXP5 236 aa20.98■□□□□ 0.95
RAB40C-204ENST00000538492 DRAM1Q8N682 238 aa20.98■□□□□ 0.95
RAB40C-204ENST00000538492 CLCC1Q96S66 551 aa20.98■□□□□ 0.95
RAB40C-204ENST00000538492 MSL2Q9HCI7 577 aa20.98■□□□□ 0.95
RAB40C-204ENST00000538492 RNF150Q9ULK6 438 aa20.98■□□□□ 0.95
RAB40C-204ENST00000538492 UMAD1C9J7I0 102 aa20.97■□□□□ 0.95
RAB40C-204ENST00000538492 GALR2O43603 387 aaPredicted RBP20.97■□□□□ 0.95
RAB40C-204ENST00000538492 CRYBA1P05813 215 aa20.97■□□□□ 0.95
RAB40C-204ENST00000538492 IAPPP10997 89 aa20.97■□□□□ 0.95
RAB40C-204ENST00000538492 COX5AP20674 150 aa20.97■□□□□ 0.95
RAB40C-204ENST00000538492 RPL23AP62750 156 aaKnown RBP20.97■□□□□ 0.95
RAB40C-204ENST00000538492 AESQ08117 197 aa20.97■□□□□ 0.95
RAB40C-204ENST00000538492 OR1L1Q8NH94 360 aa20.97■□□□□ 0.95
RAB40C-204ENST00000538492 SARAFQ96BY9 339 aa20.97■□□□□ 0.95
RAB40C-204ENST00000538492 ATP5SQ99766 215 aa20.97■□□□□ 0.95
RAB40C-204ENST00000538492 CACNA1GO43497 2377 aa20.97■□□□□ 0.95
RAB40C-204ENST00000538492 M0R036 132 aa20.97■□□□□ 0.95
RAB40C-204ENST00000538492 CECR9P0C854 216 aa20.97■□□□□ 0.95
RAB40C-204ENST00000538492 FIP1L1Q6UN15 594 aaKnown RBP20.97■□□□□ 0.95
RAB40C-204ENST00000538492 HES4Q9HCC6 221 aa20.97■□□□□ 0.95
RAB40C-204ENST00000538492 TIMM8AO60220 97 aaPredicted RBP20.96■□□□□ 0.95
RAB40C-204ENST00000538492 OR3A1P47881 315 aa20.96■□□□□ 0.95
RAB40C-204ENST00000538492 CD300LFQ8TDQ1 290 aa20.96■□□□□ 0.95
RAB40C-204ENST00000538492 SMCO4Q9NRQ5 59 aa20.96■□□□□ 0.95
RAB40C-204ENST00000538492 LIN7CQ9NUP9 197 aaKnown RBP20.96■□□□□ 0.95
RAB40C-204ENST00000538492 TXNL1O43396 289 aa20.96■□□□□ 0.95
RAB40C-204ENST00000538492 SLC25A6P12236 298 aa20.96■□□□□ 0.95
RAB40C-204ENST00000538492 LFNGQ8NES3 379 aa20.96■□□□□ 0.95
RAB40C-204ENST00000538492 GNPNAT1Q96EK6 184 aaPredicted RBP20.96■□□□□ 0.95
RAB40C-204ENST00000538492 SLC35B3Q9H1N7 401 aa20.96■□□□□ 0.95
RAB40C-204ENST00000538492 KCNIP1Q9NZI2 227 aa20.96■□□□□ 0.95
RAB40C-204ENST00000538492 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP20.95■□□□□ 0.95
RAB40C-204ENST00000538492 COLCA2A8K830 154 aa20.95■□□□□ 0.95
RAB40C-204ENST00000538492 SPSB3Q6PJ21 355 aa20.95■□□□□ 0.95
RAB40C-204ENST00000538492 Q6ZR03 302 aa20.95■□□□□ 0.95
RAB40C-204ENST00000538492 LSM10Q969L4 123 aaKnown RBP20.95■□□□□ 0.95
RAB40C-204ENST00000538492 C14orf79Q96F83 325 aa20.95■□□□□ 0.95
RAB40C-204ENST00000538492 RAB40CQ96S21 281 aa20.95■□□□□ 0.95
RAB40C-204ENST00000538492 OPN3Q9H1Y3 402 aaPredicted RBP20.95■□□□□ 0.95
RAB40C-204ENST00000538492 KCNJ16Q9NPI9 418 aa20.95■□□□□ 0.95
RAB40C-204ENST00000538492 PRR33A8MZF0 331 aa20.95■□□□□ 0.94
RAB40C-204ENST00000538492 DAOP14920 347 aa20.95■□□□□ 0.94
RAB40C-204ENST00000538492 SULT1A1P50225 295 aa20.95■□□□□ 0.94
RAB40C-204ENST00000538492 ZNF610Q8N9Z0 462 aa20.95■□□□□ 0.94
RAB40C-204ENST00000538492 TMEM30CPA0ZSE6 113 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms