RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 E9PI62 339 aa10.8□□□□□ -0.68
SMARCA4-206ENST00000538456 CSTBP04080 98 aaKnown RBP10.8□□□□□ -0.68
SMARCA4-206ENST00000538456 OR8U9P0C7N5 309 aa10.8□□□□□ -0.68
SMARCA4-206ENST00000538456 ACTBP60709 375 aa10.8□□□□□ -0.68
SMARCA4-206ENST00000538456 PITPNAQ00169 270 aa10.8□□□□□ -0.68
SMARCA4-206ENST00000538456 GALEQ14376 348 aa10.8□□□□□ -0.68
SMARCA4-206ENST00000538456 ZNF497Q6ZNH5 498 aa10.8□□□□□ -0.68
SMARCA4-206ENST00000538456 OR4C12Q96R67 309 aa10.8□□□□□ -0.68
SMARCA4-206ENST00000538456 ANKRD60Q9BZ19 345 aa10.8□□□□□ -0.68
SMARCA4-206ENST00000538456 TOLLIPQ9H0E2 274 aa10.8□□□□□ -0.68
SMARCA4-206ENST00000538456 METTL9Q9H1A3 318 aa10.8□□□□□ -0.68
SMARCA4-206ENST00000538456 C8orf4Q9NR00 106 aa10.8□□□□□ -0.68
SMARCA4-206ENST00000538456 CHCHD3Q9NX63 227 aaKnown RBP10.8□□□□□ -0.68
SMARCA4-206ENST00000538456 A0A1W2PN81 502 aa10.79□□□□□ -0.68
SMARCA4-206ENST00000538456 SPINT2O43291 252 aa10.79□□□□□ -0.68
SMARCA4-206ENST00000538456 HLA-DRB1P01911 266 aa10.79□□□□□ -0.68
SMARCA4-206ENST00000538456 MT-ND4P03905 459 aa10.79□□□□□ -0.68
SMARCA4-206ENST00000538456 LGALS1P09382 135 aaKnown RBP10.79□□□□□ -0.68
SMARCA4-206ENST00000538456 CHRNA7P36544 502 aa10.79□□□□□ -0.68
SMARCA4-206ENST00000538456 VEGFCP49767 419 aa10.79□□□□□ -0.68
SMARCA4-206ENST00000538456 Q3ZCU0 254 aa10.79□□□□□ -0.68
SMARCA4-206ENST00000538456 NHLRC3Q5JS37 347 aa10.79□□□□□ -0.68
SMARCA4-206ENST00000538456 ZNF529Q6P280 563 aa10.79□□□□□ -0.68
SMARCA4-206ENST00000538456 ASCL4Q6XD76 172 aa10.79□□□□□ -0.68
SMARCA4-206ENST00000538456 STX19Q8N4C7 294 aa10.79□□□□□ -0.68
SMARCA4-206ENST00000538456 MINDY2Q8NBR6 621 aa10.79□□□□□ -0.68
SMARCA4-206ENST00000538456 OR4K15Q8NH41 348 aa10.79□□□□□ -0.68
SMARCA4-206ENST00000538456 OR1L1Q8NH94 360 aa10.79□□□□□ -0.68
SMARCA4-206ENST00000538456 ZNF251Q9BRH9 671 aa10.79□□□□□ -0.68
SMARCA4-206ENST00000538456 RSRP1Q9BUV0 290 aa10.79□□□□□ -0.68
SMARCA4-206ENST00000538456 C9orf16Q9BUW7 83 aa10.79□□□□□ -0.68
SMARCA4-206ENST00000538456 MRPL20Q9BYC9 149 aaKnown RBP10.79□□□□□ -0.68
SMARCA4-206ENST00000538456 VCXQ9H320 206 aa10.79□□□□□ -0.68
SMARCA4-206ENST00000538456 TRAPPC2LQ9UL33 140 aa10.79□□□□□ -0.68
SMARCA4-206ENST00000538456 OAZ3Q9UMX2 235 aa10.79□□□□□ -0.68
SMARCA4-206ENST00000538456 MRPS28Q9Y2Q9 187 aaKnown RBP10.79□□□□□ -0.68
SMARCA4-206ENST00000538456 A3GALT2U3KPV4 340 aa10.79□□□□□ -0.68
SMARCA4-206ENST00000538456 A0A1W2PP11 408 aa10.78□□□□□ -0.68
SMARCA4-206ENST00000538456 NBR2O15453 112 aa10.78□□□□□ -0.68
SMARCA4-206ENST00000538456 LANCL1O43813 399 aa10.78□□□□□ -0.68
SMARCA4-206ENST00000538456 SOX15O60248 233 aa10.78□□□□□ -0.68
SMARCA4-206ENST00000538456 IGHV3-11P01762 117 aa10.78□□□□□ -0.68
SMARCA4-206ENST00000538456 HBZP02008 142 aa10.78□□□□□ -0.68
SMARCA4-206ENST00000538456 RPSAP08865 295 aaKnown RBP10.78□□□□□ -0.68
SMARCA4-206ENST00000538456 NDPQ00604 133 aa10.78□□□□□ -0.68
SMARCA4-206ENST00000538456 LRRC36Q1X8D7 754 aa10.78□□□□□ -0.68
SMARCA4-206ENST00000538456 C5orf64Q2M2E5 130 aa10.78□□□□□ -0.68
SMARCA4-206ENST00000538456 SYT6Q5T7P8 510 aaPredicted RBP10.78□□□□□ -0.68
SMARCA4-206ENST00000538456 IZUMO2Q6UXV1 221 aa10.78□□□□□ -0.68
SMARCA4-206ENST00000538456 LINC00596Q86U02 117 aa10.78□□□□□ -0.68
SMARCA4-206ENST00000538456 SGPP2Q8IWX5 399 aa10.78□□□□□ -0.68
SMARCA4-206ENST00000538456 Q8N1Y9 231 aa10.78□□□□□ -0.68
SMARCA4-206ENST00000538456 PACRGLQ8N7B6 248 aa10.78□□□□□ -0.68
SMARCA4-206ENST00000538456 LGALS12Q96DT0 336 aa10.78□□□□□ -0.68
SMARCA4-206ENST00000538456 MRPL48Q96GC5 212 aaKnown RBP10.78□□□□□ -0.68
SMARCA4-206ENST00000538456 S100A13Q99584 98 aa10.78□□□□□ -0.68
SMARCA4-206ENST00000538456 ZNF184Q99676 751 aaPredicted RBP10.78□□□□□ -0.68
SMARCA4-206ENST00000538456 JAM3Q9BX67 310 aa10.78□□□□□ -0.68
SMARCA4-206ENST00000538456 IL36GQ9NZH8 169 aa10.78□□□□□ -0.68
SMARCA4-206ENST00000538456 AASSQ9UDR5 926 aa10.78□□□□□ -0.68
SMARCA4-206ENST00000538456 FBXO7Q9Y3I1 522 aa10.78□□□□□ -0.68
SMARCA4-206ENST00000538456 SAC3D1A6NKF1 404 aa10.77□□□□□ -0.69
SMARCA4-206ENST00000538456 JTBO76095 146 aa10.77□□□□□ -0.69
SMARCA4-206ENST00000538456 ZNF93P35789 620 aaPredicted RBP10.77□□□□□ -0.69
SMARCA4-206ENST00000538456 ADARB1P78563 741 aaKnown RBP10.77□□□□□ -0.69
SMARCA4-206ENST00000538456 GNMTQ14749 295 aa10.77□□□□□ -0.69
SMARCA4-206ENST00000538456 MPV17LQ2QL34 196 aa10.77□□□□□ -0.69
SMARCA4-206ENST00000538456 SLC22A6Q4U2R8 563 aa10.77□□□□□ -0.69
SMARCA4-206ENST00000538456 DDI2Q5TDH0 399 aa10.77□□□□□ -0.69
SMARCA4-206ENST00000538456 LIN54Q6MZP7 749 aa10.77□□□□□ -0.69
SMARCA4-206ENST00000538456 LYPD6Q86Y78 171 aa10.77□□□□□ -0.69
SMARCA4-206ENST00000538456 SYS1Q8N2H4 156 aa10.77□□□□□ -0.69
SMARCA4-206ENST00000538456 ABHD5Q8WTS1 349 aa10.77□□□□□ -0.69
SMARCA4-206ENST00000538456 TRUB1Q8WWH5 349 aaKnown RBP10.77□□□□□ -0.69
SMARCA4-206ENST00000538456 RGP1Q92546 391 aaPredicted RBP10.77□□□□□ -0.69
SMARCA4-206ENST00000538456 SPATA25Q9BR10 227 aa10.77□□□□□ -0.69
SMARCA4-206ENST00000538456 TPSG1Q9NRR2 321 aa10.77□□□□□ -0.69
SMARCA4-206ENST00000538456 C19orf73Q9NVV2 129 aa10.77□□□□□ -0.69
SMARCA4-206ENST00000538456 ETAA1Q9NY74 926 aa10.77□□□□□ -0.69
SMARCA4-206ENST00000538456 FOXA2Q9Y261 457 aaPredicted RBP10.77□□□□□ -0.69
SMARCA4-206ENST00000538456 EXOGQ9Y2C4 368 aaKnown RBP10.77□□□□□ -0.69
SMARCA4-206ENST00000538456 LRRC42Q9Y546 428 aa10.77□□□□□ -0.69
SMARCA4-206ENST00000538456 HSPA12AO43301 675 aa10.76□□□□□ -0.69
SMARCA4-206ENST00000538456 ARSBP15848 533 aa10.76□□□□□ -0.69
SMARCA4-206ENST00000538456 RCC1P18754 421 aaPredicted RBP10.76□□□□□ -0.69
SMARCA4-206ENST00000538456 GTF2A1P52655 376 aaPredicted RBP10.76□□□□□ -0.69
SMARCA4-206ENST00000538456 PPP3R1P63098 170 aa10.76□□□□□ -0.69
SMARCA4-206ENST00000538456 C19orf54Q5BKX5 351 aa10.76□□□□□ -0.69
SMARCA4-206ENST00000538456 C6orf183Q5T699 404 aa10.76□□□□□ -0.69
SMARCA4-206ENST00000538456 MEDAGQ5VYS4 303 aa10.76□□□□□ -0.69
SMARCA4-206ENST00000538456 ANKRD13BQ86YJ7 626 aa10.76□□□□□ -0.69
SMARCA4-206ENST00000538456 ABHD14AQ9BUJ0 271 aa10.76□□□□□ -0.69
SMARCA4-206ENST00000538456 CST11Q9H112 138 aa10.76□□□□□ -0.69
SMARCA4-206ENST00000538456 RAB9BQ9NP90 201 aa10.76□□□□□ -0.69
SMARCA4-206ENST00000538456 OR2S2Q9NQN1 319 aa10.76□□□□□ -0.69
SMARCA4-206ENST00000538456 PAK1IP1Q9NWT1 392 aaPredicted RBP10.76□□□□□ -0.69
SMARCA4-206ENST00000538456 KIAA1456Q9P272 454 aa10.76□□□□□ -0.69
SMARCA4-206ENST00000538456 STUB1Q9UNE7 303 aa10.76□□□□□ -0.69
SMARCA4-206ENST00000538456 ERGIC3Q9Y282 383 aa10.76□□□□□ -0.69
SMARCA4-206ENST00000538456 MCRIP1C9JLW8 97 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms