RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 SELENOIQ9C0D9 397 aa9.93□□□□□ -0.82
PRKDC-207ENST00000536483 RAB9BQ9NP90 201 aa9.93□□□□□ -0.82
PRKDC-207ENST00000536483 ING3Q9NXR8 418 aa9.93□□□□□ -0.82
PRKDC-207ENST00000536483 PEX16Q9Y5Y5 336 aa9.93□□□□□ -0.82
PRKDC-207ENST00000536483 CRTAPO75718 401 aaPredicted RBP9.92□□□□□ -0.82
PRKDC-207ENST00000536483 ARL6IP5O75915 188 aa9.92□□□□□ -0.82
PRKDC-207ENST00000536483 BPNT1O95861 308 aa9.92□□□□□ -0.82
PRKDC-207ENST00000536483 AMY1AP04745 511 aa9.92□□□□□ -0.82
PRKDC-207ENST00000536483 AMY2AP04746 511 aa9.92□□□□□ -0.82
PRKDC-207ENST00000536483 CD36P16671 472 aa9.92□□□□□ -0.82
PRKDC-207ENST00000536483 GALP22466 123 aa9.92□□□□□ -0.82
PRKDC-207ENST00000536483 NFYBP25208 207 aa9.92□□□□□ -0.82
PRKDC-207ENST00000536483 CHATP28329 748 aa9.92□□□□□ -0.82
PRKDC-207ENST00000536483 MNDAP41218 407 aa9.92□□□□□ -0.82
PRKDC-207ENST00000536483 RANBP1P43487 201 aa9.92□□□□□ -0.82
PRKDC-207ENST00000536483 ZNF137PP52743 207 aa9.92□□□□□ -0.82
PRKDC-207ENST00000536483 BLCAPP62952 87 aa9.92□□□□□ -0.82
PRKDC-207ENST00000536483 RPS27AP62979 156 aaKnown RBP9.92□□□□□ -0.82
PRKDC-207ENST00000536483 ZNF816Q0VGE8 651 aaPredicted RBP9.92□□□□□ -0.82
PRKDC-207ENST00000536483 MADCAM1Q13477 382 aa9.92□□□□□ -0.82
PRKDC-207ENST00000536483 EBI3Q14213 229 aa9.92□□□□□ -0.82
PRKDC-207ENST00000536483 C6orf183Q5T699 404 aa9.92□□□□□ -0.82
PRKDC-207ENST00000536483 FAM89BQ8N5H3 189 aa9.92□□□□□ -0.82
PRKDC-207ENST00000536483 OR6M1Q8NGM8 313 aa9.92□□□□□ -0.82
PRKDC-207ENST00000536483 S100ZQ8WXG8 99 aa9.92□□□□□ -0.82
PRKDC-207ENST00000536483 BORCS5Q969J3 196 aa9.92□□□□□ -0.82
PRKDC-207ENST00000536483 ARL11Q969Q4 196 aa9.92□□□□□ -0.82
PRKDC-207ENST00000536483 ST6GALNAC6Q969X2 333 aa9.92□□□□□ -0.82
PRKDC-207ENST00000536483 GFI1Q99684 422 aa9.92□□□□□ -0.82
PRKDC-207ENST00000536483 BANF2Q9H503 90 aa9.92□□□□□ -0.82
PRKDC-207ENST00000536483 GFOD1Q9NXC2 390 aa9.92□□□□□ -0.82
PRKDC-207ENST00000536483 ETAA1Q9NY74 926 aa9.92□□□□□ -0.82
PRKDC-207ENST00000536483 TRAV39A0A0B4J263 110 aa9.91□□□□□ -0.82
PRKDC-207ENST00000536483 A0A1W2PPI3 338 aa9.91□□□□□ -0.82
PRKDC-207ENST00000536483 A0A1W2PRX2 142 aa9.91□□□□□ -0.82
PRKDC-207ENST00000536483 FAM172BPA6NC97 362 aa9.91□□□□□ -0.82
PRKDC-207ENST00000536483 C12orf77C9JDV5 145 aa9.91□□□□□ -0.82
PRKDC-207ENST00000536483 M0QZK8 103 aa9.91□□□□□ -0.82
PRKDC-207ENST00000536483 AIPO00170 330 aa9.91□□□□□ -0.82
PRKDC-207ENST00000536483 SLC17A2O00624 439 aa9.91□□□□□ -0.82
PRKDC-207ENST00000536483 FAM106CPP0CH98 169 aa9.91□□□□□ -0.82
PRKDC-207ENST00000536483 IGLL1P15814 213 aa9.91□□□□□ -0.82
PRKDC-207ENST00000536483 HTR2CP28335 458 aa9.91□□□□□ -0.82
PRKDC-207ENST00000536483 MAP2K4P45985 399 aa9.91□□□□□ -0.82
PRKDC-207ENST00000536483 PSMD7P51665 324 aa9.91□□□□□ -0.82
PRKDC-207ENST00000536483 RPS25P62851 125 aaKnown RBP9.91□□□□□ -0.82
PRKDC-207ENST00000536483 UNC119Q13432 240 aa9.91□□□□□ -0.82
PRKDC-207ENST00000536483 TMEM95Q3KNT9 176 aa9.91□□□□□ -0.82
PRKDC-207ENST00000536483 ARSJQ5FYB0 599 aaPredicted RBP9.91□□□□□ -0.82
PRKDC-207ENST00000536483 OR2W3Q7Z3T1 314 aa9.91□□□□□ -0.82
PRKDC-207ENST00000536483 ZNF439Q8NDP4 499 aa9.91□□□□□ -0.82
PRKDC-207ENST00000536483 TMEM203Q969S6 136 aa9.91□□□□□ -0.82
PRKDC-207ENST00000536483 RPEQ96AT9 228 aa9.91□□□□□ -0.82
PRKDC-207ENST00000536483 NAA50Q9GZZ1 169 aaKnown RBP9.91□□□□□ -0.82
PRKDC-207ENST00000536483 DNAH9Q9NYC9 4486 aa9.9□□□□□ -0.82
PRKDC-207ENST00000536483 TRBV6-6A0A0A6YYG2 114 aa9.9□□□□□ -0.82
PRKDC-207ENST00000536483 TRAV1-2A0A0B4J238 106 aa9.9□□□□□ -0.82
PRKDC-207ENST00000536483 FOXI3A8MTJ6 420 aaPredicted RBP9.9□□□□□ -0.82
PRKDC-207ENST00000536483 CCRL2O00421 344 aa9.9□□□□□ -0.82
PRKDC-207ENST00000536483 SPINT2O43291 252 aa9.9□□□□□ -0.82
PRKDC-207ENST00000536483 MPIG6BO95866 241 aa9.9□□□□□ -0.82
PRKDC-207ENST00000536483 HSMCR30P0CW71 290 aa9.9□□□□□ -0.82
PRKDC-207ENST00000536483 ZNF182P17025 639 aaPredicted RBP9.9□□□□□ -0.82
PRKDC-207ENST00000536483 CD33P20138 364 aa9.9□□□□□ -0.82
PRKDC-207ENST00000536483 VDAC2P45880 294 aaPredicted RBP9.9□□□□□ -0.82
PRKDC-207ENST00000536483 HTD2P86397 168 aa9.9□□□□□ -0.82
PRKDC-207ENST00000536483 FABP5Q01469 135 aa9.9□□□□□ -0.82
PRKDC-207ENST00000536483 SSX1Q16384 188 aa9.9□□□□□ -0.82
PRKDC-207ENST00000536483 ZNF880Q6PDB4 577 aa9.9□□□□□ -0.82
PRKDC-207ENST00000536483 SLC25A48Q6ZT89 311 aaKnown RBP9.9□□□□□ -0.82
PRKDC-207ENST00000536483 WFDC9Q8NEX5 89 aa9.9□□□□□ -0.82
PRKDC-207ENST00000536483 NEK7Q8TDX7 302 aa9.9□□□□□ -0.82
PRKDC-207ENST00000536483 TOMM40LQ969M1 308 aa9.9□□□□□ -0.82
PRKDC-207ENST00000536483 DCUN1D5Q9BTE7 237 aa9.9□□□□□ -0.82
PRKDC-207ENST00000536483 TMEM59Q9BXS4 323 aa9.9□□□□□ -0.82
PRKDC-207ENST00000536483 WDR12Q9GZL7 423 aaKnown RBP9.9□□□□□ -0.82
PRKDC-207ENST00000536483 HSF4Q9ULV5 492 aa9.9□□□□□ -0.82
PRKDC-207ENST00000536483 SDCBPO00560 298 aaPredicted RBP9.89□□□□□ -0.83
PRKDC-207ENST00000536483 LDLRAD4O15165 306 aa9.89□□□□□ -0.83
PRKDC-207ENST00000536483 FGF16O43320 207 aa9.89□□□□□ -0.83
PRKDC-207ENST00000536483 AIREO43918 545 aa9.89□□□□□ -0.83
PRKDC-207ENST00000536483 NAPSAO96009 420 aa9.89□□□□□ -0.83
PRKDC-207ENST00000536483 HBZP02008 142 aa9.89□□□□□ -0.83
PRKDC-207ENST00000536483 GAPDHP04406 335 aaKnown RBP9.89□□□□□ -0.83
PRKDC-207ENST00000536483 RCC1P18754 421 aaPredicted RBP9.89□□□□□ -0.83
PRKDC-207ENST00000536483 CD83Q01151 205 aa9.89□□□□□ -0.83
PRKDC-207ENST00000536483 VAX1Q5SQQ9 334 aa9.89□□□□□ -0.83
PRKDC-207ENST00000536483 OR10K2Q6IF99 312 aa9.89□□□□□ -0.83
PRKDC-207ENST00000536483 OR5AU1Q8NGC0 362 aa9.89□□□□□ -0.83
PRKDC-207ENST00000536483 OR10X1Q8NGY0 326 aa9.89□□□□□ -0.83
PRKDC-207ENST00000536483 MRPL30Q8TCC3 161 aaKnown RBP9.89□□□□□ -0.83
PRKDC-207ENST00000536483 CCDC107Q8WV48 283 aa9.89□□□□□ -0.83
PRKDC-207ENST00000536483 LEAP2Q969E1 77 aa9.89□□□□□ -0.83
PRKDC-207ENST00000536483 SLC25A33Q9BSK2 321 aa9.89□□□□□ -0.83
PRKDC-207ENST00000536483 LPAR5Q9H1C0 372 aa9.89□□□□□ -0.83
PRKDC-207ENST00000536483 RIMS4Q9H426 269 aaPredicted RBP9.89□□□□□ -0.83
PRKDC-207ENST00000536483 NDUFB11Q9NX14 153 aa9.89□□□□□ -0.83
PRKDC-207ENST00000536483 TRAPPC2LQ9UL33 140 aa9.89□□□□□ -0.83
PRKDC-207ENST00000536483 TRDV1A0A1B0GX56 115 aa9.88□□□□□ -0.83
PRKDC-207ENST00000536483 K7EIL1 84 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms