RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 TNFSF13O75888 250 aa12.02□□□□□ -0.49
LIG1-203ENST00000536218 HLA-HP01893 362 aa12.02□□□□□ -0.49
LIG1-203ENST00000536218 HPNP05981 417 aa12.02□□□□□ -0.49
LIG1-203ENST00000536218 ZNF20P17024 532 aa12.02□□□□□ -0.49
LIG1-203ENST00000536218 DUSP1P28562 367 aa12.02□□□□□ -0.49
LIG1-203ENST00000536218 PDLIM4P50479 330 aa12.02□□□□□ -0.49
LIG1-203ENST00000536218 PHYHD1Q5SRE7 291 aa12.02□□□□□ -0.49
LIG1-203ENST00000536218 RIPPLY2Q5TAB7 128 aa12.02□□□□□ -0.49
LIG1-203ENST00000536218 ABHD12BQ7Z5M8 362 aaPredicted RBP12.02□□□□□ -0.49
LIG1-203ENST00000536218 OR5D14Q8NGL3 314 aa12.02□□□□□ -0.49
LIG1-203ENST00000536218 RPUSD4Q96CM3 377 aaKnown RBP12.02□□□□□ -0.49
LIG1-203ENST00000536218 GPR35Q9HC97 309 aa12.02□□□□□ -0.49
LIG1-203ENST00000536218 FAM206AQ9NX38 181 aa12.02□□□□□ -0.49
LIG1-203ENST00000536218 BLVRBP30043 206 aaPredicted RBP12.02□□□□□ -0.49
LIG1-203ENST00000536218 FAM3BP58499 235 aaPredicted RBP12.02□□□□□ -0.49
LIG1-203ENST00000536218 IL13RA2Q14627 380 aa12.02□□□□□ -0.49
LIG1-203ENST00000536218 ACOT6Q3I5F7 207 aaPredicted RBP12.02□□□□□ -0.49
LIG1-203ENST00000536218 ZNF709Q8N972 641 aa12.02□□□□□ -0.49
LIG1-203ENST00000536218 Q8NFD4 153 aa12.02□□□□□ -0.49
LIG1-203ENST00000536218 BOD1Q96IK1 185 aa12.02□□□□□ -0.49
LIG1-203ENST00000536218 PATZ1Q9HBE1 687 aaKnown RBP12.02□□□□□ -0.49
LIG1-203ENST00000536218 CRYM-AS1A6NIL9 109 aa12.01□□□□□ -0.49
LIG1-203ENST00000536218 F5H5K5 113 aa12.01□□□□□ -0.49
LIG1-203ENST00000536218 CYC1P08574 325 aa12.01□□□□□ -0.49
LIG1-203ENST00000536218 SLC25A47Q6Q0C1 308 aa12.01□□□□□ -0.49
LIG1-203ENST00000536218 DHRS13Q6UX07 377 aa12.01□□□□□ -0.49
LIG1-203ENST00000536218 FAM57BQ71RH2 274 aa12.01□□□□□ -0.49
LIG1-203ENST00000536218 OR4C5Q8NGB2 326 aa12.01□□□□□ -0.49
LIG1-203ENST00000536218 KCNG3Q8TAE7 436 aa12.01□□□□□ -0.49
LIG1-203ENST00000536218 RTN4IP1Q8WWV3 396 aaPredicted RBP12.01□□□□□ -0.49
LIG1-203ENST00000536218 SSSCA1O60232 199 aa12.01□□□□□ -0.49
LIG1-203ENST00000536218 CBR3O75828 277 aa12.01□□□□□ -0.49
LIG1-203ENST00000536218 ZNF121P58317 390 aaPredicted RBP12.01□□□□□ -0.49
LIG1-203ENST00000536218 IL24Q13007 206 aa12.01□□□□□ -0.49
LIG1-203ENST00000536218 WIPI1Q5MNZ9 446 aaPredicted RBP12.01□□□□□ -0.49
LIG1-203ENST00000536218 SPINK14Q6IE38 97 aa12.01□□□□□ -0.49
LIG1-203ENST00000536218 MRPL52Q86TS9 123 aaKnown RBP12.01□□□□□ -0.49
LIG1-203ENST00000536218 ZNF837Q96EG3 531 aaPredicted RBP12.01□□□□□ -0.49
LIG1-203ENST00000536218 ZNF319Q9P2F9 582 aa12.01□□□□□ -0.49
LIG1-203ENST00000536218 PRSS50Q9UI38 385 aa12.01□□□□□ -0.49
LIG1-203ENST00000536218 CNOT1A5YKK6 2376 aaKnown RBP12.01□□□□□ -0.49
LIG1-203ENST00000536218 SPTBN2O15020 2390 aa12□□□□□ -0.49
LIG1-203ENST00000536218 C9orf172C9J069 976 aa12□□□□□ -0.49
LIG1-203ENST00000536218 NDUFB8O95169 186 aa12□□□□□ -0.49
LIG1-203ENST00000536218 DYNLT3P51808 116 aa12□□□□□ -0.49
LIG1-203ENST00000536218 ZNF787Q6DD87 383 aa12□□□□□ -0.49
LIG1-203ENST00000536218 NUDT10Q8NFP7 164 aa12□□□□□ -0.49
LIG1-203ENST00000536218 OR51G1Q8NGK1 321 aa12□□□□□ -0.49
LIG1-203ENST00000536218 C20orf144Q9BQM9 153 aa12□□□□□ -0.49
LIG1-203ENST00000536218 SRXN1Q9BYN0 137 aa12□□□□□ -0.49
LIG1-203ENST00000536218 BCL2P10415 239 aa12□□□□□ -0.49
LIG1-203ENST00000536218 OR8G5Q8NG78 346 aa12□□□□□ -0.49
LIG1-203ENST00000536218 HDHD3Q9BSH5 251 aaPredicted RBP12□□□□□ -0.49
LIG1-203ENST00000536218 OR10A2Q9H208 303 aa12□□□□□ -0.49
LIG1-203ENST00000536218 ZNF581Q9P0T4 197 aa12□□□□□ -0.49
LIG1-203ENST00000536218 PCNX2A6NKB5 2137 aa12□□□□□ -0.49
LIG1-203ENST00000536218 DOCK10Q96BY6 2186 aa12□□□□□ -0.49
LIG1-203ENST00000536218 A0A1W2PNU3 283 aaPredicted RBP12□□□□□ -0.49
LIG1-203ENST00000536218 C5orf63A6NC05 138 aa12□□□□□ -0.49
LIG1-203ENST00000536218 MAP1LC3B2A6NCE7 125 aa12□□□□□ -0.49
LIG1-203ENST00000536218 CTSDP07339 412 aaPredicted RBP12□□□□□ -0.49
LIG1-203ENST00000536218 TMEM225BP0DP42 221 aa12□□□□□ -0.49
LIG1-203ENST00000536218 TMEM41BQ5BJD5 291 aa12□□□□□ -0.49
LIG1-203ENST00000536218 MAP1LC3BQ9GZQ8 125 aa12□□□□□ -0.49
LIG1-203ENST00000536218 NCOR1P1Q9H4R4 102 aa12□□□□□ -0.49
LIG1-203ENST00000536218 ZNF320A2RRD8 509 aa11.99□□□□□ -0.49
LIG1-203ENST00000536218 BSXQ3C1V8 233 aa11.99□□□□□ -0.49
LIG1-203ENST00000536218 OR2T10Q8NGZ9 312 aa11.99□□□□□ -0.49
LIG1-203ENST00000536218 SGCZQ96LD1 299 aa11.99□□□□□ -0.49
LIG1-203ENST00000536218 TXN2Q99757 166 aa11.99□□□□□ -0.49
LIG1-203ENST00000536218 ZNF552Q9H707 407 aaPredicted RBP11.99□□□□□ -0.49
LIG1-203ENST00000536218 Q9N2K0 584 aa11.99□□□□□ -0.49
LIG1-203ENST00000536218 TMEM9BQ9NQ34 198 aa11.99□□□□□ -0.49
LIG1-203ENST00000536218 DEPPQ9NTK1 212 aa11.99□□□□□ -0.49
LIG1-203ENST00000536218 GRIFINA4D1Z8 144 aa11.99□□□□□ -0.49
LIG1-203ENST00000536218 ZNF850A8MQ14 1090 aa11.99□□□□□ -0.49
LIG1-203ENST00000536218 PHF1O43189 567 aaPredicted RBP11.99□□□□□ -0.49
LIG1-203ENST00000536218 ISG15P05161 165 aa11.99□□□□□ -0.49
LIG1-203ENST00000536218 CD59P13987 128 aa11.99□□□□□ -0.49
LIG1-203ENST00000536218 GCH1P30793 250 aa11.99□□□□□ -0.49
LIG1-203ENST00000536218 CDKN1AP38936 164 aa11.99□□□□□ -0.49
LIG1-203ENST00000536218 ACTL10Q5JWF8 245 aa11.99□□□□□ -0.49
LIG1-203ENST00000536218 UNQ5815/PRO19632Q6UWF5 114 aa11.99□□□□□ -0.49
LIG1-203ENST00000536218 OR8B12Q8NGG6 310 aa11.99□□□□□ -0.49
LIG1-203ENST00000536218 GSX1Q9H4S2 264 aaPredicted RBP11.99□□□□□ -0.49
LIG1-203ENST00000536218 CDX4O14627 284 aaPredicted RBP11.98□□□□□ -0.49
LIG1-203ENST00000536218 CXCL13O43927 109 aa11.98□□□□□ -0.49
LIG1-203ENST00000536218 ERASQ7Z444 233 aa11.98□□□□□ -0.49
LIG1-203ENST00000536218 TGIF2LYQ8IUE0 185 aa11.98□□□□□ -0.49
LIG1-203ENST00000536218 GNPNAT1Q96EK6 184 aaPredicted RBP11.98□□□□□ -0.49
LIG1-203ENST00000536218 SH2D2AQ9NP31 389 aa11.98□□□□□ -0.49
LIG1-203ENST00000536218 TMEM106BQ9NUM4 274 aa11.98□□□□□ -0.49
LIG1-203ENST00000536218 DNAJC13O75165 2243 aa11.98□□□□□ -0.49
LIG1-203ENST00000536218 ZNF728P0DKX0 622 aa11.98□□□□□ -0.49
LIG1-203ENST00000536218 GDF1P27539 372 aa11.98□□□□□ -0.49
LIG1-203ENST00000536218 CYB561P49447 251 aa11.98□□□□□ -0.49
LIG1-203ENST00000536218 RANP62826 216 aaKnown RBP11.98□□□□□ -0.49
LIG1-203ENST00000536218 UBE2V1Q13404 147 aa11.98□□□□□ -0.49
LIG1-203ENST00000536218 TMEM187Q14656 261 aa11.98□□□□□ -0.49
LIG1-203ENST00000536218 TMEM241Q24JQ0 296 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms