RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 HKR1P10072 659 aa14.39□□□□□ -0.11
DDX55-204ENST00000536079 CD24P25063 80 aa14.39□□□□□ -0.11
DDX55-204ENST00000536079 PPP1CCP36873 323 aaKnown RBP14.39□□□□□ -0.11
DDX55-204ENST00000536079 AANATQ16613 207 aa14.39□□□□□ -0.11
DDX55-204ENST00000536079 CDNFQ49AH0 187 aa14.39□□□□□ -0.11
DDX55-204ENST00000536079 TRAT1Q6PIZ9 186 aa14.39□□□□□ -0.11
DDX55-204ENST00000536079 IZUMO1Q8IYV9 350 aa14.39□□□□□ -0.11
DDX55-204ENST00000536079 DTX3Q8N9I9 347 aa14.39□□□□□ -0.11
DDX55-204ENST00000536079 PARP12Q9H0J9 701 aaKnown RBP14.39□□□□□ -0.11
DDX55-204ENST00000536079 C12orf4Q9NQ89 552 aa14.39□□□□□ -0.11
DDX55-204ENST00000536079 OR2S2Q9NQN1 319 aa14.39□□□□□ -0.11
DDX55-204ENST00000536079 ZNF230Q9UIE0 474 aaPredicted RBP14.39□□□□□ -0.11
DDX55-204ENST00000536079 IGKV1-6A0A0C4DH72 117 aa14.38□□□□□ -0.11
DDX55-204ENST00000536079 CHST1O43916 411 aa14.38□□□□□ -0.11
DDX55-204ENST00000536079 ZNF260Q3ZCT1 412 aa14.38□□□□□ -0.11
DDX55-204ENST00000536079 MORN2Q502X0 79 aa14.38□□□□□ -0.11
DDX55-204ENST00000536079 ZNF554Q86TJ5 538 aa14.38□□□□□ -0.11
DDX55-204ENST00000536079 TMEM219Q86XT9 240 aa14.38□□□□□ -0.11
DDX55-204ENST00000536079 LINC00311Q8N616 119 aa14.38□□□□□ -0.11
DDX55-204ENST00000536079 GCDHQ92947 438 aaPredicted RBP14.38□□□□□ -0.11
DDX55-204ENST00000536079 RIMS4Q9H426 269 aaPredicted RBP14.38□□□□□ -0.11
DDX55-204ENST00000536079 GNG12Q9UBI6 72 aa14.38□□□□□ -0.11
DDX55-204ENST00000536079 SPATA2Q9UM82 520 aa14.38□□□□□ -0.11
DDX55-204ENST00000536079 ETV7Q9Y603 341 aa14.38□□□□□ -0.11
DDX55-204ENST00000536079 IGKV1D-8A0A087WSZ0 117 aa14.37□□□□□ -0.11
DDX55-204ENST00000536079 A6NDX4 124 aa14.37□□□□□ -0.11
DDX55-204ENST00000536079 TMEM235A6NFC5 223 aa14.37□□□□□ -0.11
DDX55-204ENST00000536079 FCGR3AP08637 254 aa14.37□□□□□ -0.11
DDX55-204ENST00000536079 CD3GP09693 182 aa14.37□□□□□ -0.11
DDX55-204ENST00000536079 SCAND1P57086 179 aa14.37□□□□□ -0.11
DDX55-204ENST00000536079 HLA-DRB3P79483 266 aa14.37□□□□□ -0.11
DDX55-204ENST00000536079 HTD2P86397 168 aa14.37□□□□□ -0.11
DDX55-204ENST00000536079 HERPUD1Q15011 391 aa14.37□□□□□ -0.11
DDX55-204ENST00000536079 CLVS1Q8IUQ0 354 aaPredicted RBP14.37□□□□□ -0.11
DDX55-204ENST00000536079 OR5R1Q8NH85 324 aa14.37□□□□□ -0.11
DDX55-204ENST00000536079 IL1F10Q8WWZ1 152 aa14.37□□□□□ -0.11
DDX55-204ENST00000536079 ABRACLQ9P1F3 81 aa14.37□□□□□ -0.11
DDX55-204ENST00000536079 OR1A1Q9P1Q5 309 aa14.37□□□□□ -0.11
DDX55-204ENST00000536079 ANK2Q01484 3957 aa14.36□□□□□ -0.11
DDX55-204ENST00000536079 A0A1W2PPI3 338 aa14.36□□□□□ -0.11
DDX55-204ENST00000536079 BTBD17A6NE02 478 aa14.36□□□□□ -0.11
DDX55-204ENST00000536079 SSX5O60225 188 aa14.36□□□□□ -0.11
DDX55-204ENST00000536079 PTHLHP12272 177 aa14.36□□□□□ -0.11
DDX55-204ENST00000536079 RPL5P46777 297 aaKnown RBP14.36□□□□□ -0.11
DDX55-204ENST00000536079 REG1BP48304 166 aa14.36□□□□□ -0.11
DDX55-204ENST00000536079 DYNLT3P51808 116 aa14.36□□□□□ -0.11
DDX55-204ENST00000536079 SPCS2Q15005 226 aa14.36□□□□□ -0.11
DDX55-204ENST00000536079 SLC25A48Q6ZT89 311 aaKnown RBP14.36□□□□□ -0.11
DDX55-204ENST00000536079 MOB1BQ7L9L4 216 aa14.36□□□□□ -0.11
DDX55-204ENST00000536079 C8orf31Q8N9H6 132 aa14.36□□□□□ -0.11
DDX55-204ENST00000536079 OR10X1Q8NGY0 326 aa14.36□□□□□ -0.11
DDX55-204ENST00000536079 NUDCD2Q8WVJ2 157 aa14.36□□□□□ -0.11
DDX55-204ENST00000536079 ST6GALNAC6Q969X2 333 aa14.36□□□□□ -0.11
DDX55-204ENST00000536079 GALMQ96C23 342 aa14.36□□□□□ -0.11
DDX55-204ENST00000536079 OCSTAMPQ9BR26 566 aa14.36□□□□□ -0.11
DDX55-204ENST00000536079 DCSTAMPQ9H295 470 aa14.36□□□□□ -0.11
DDX55-204ENST00000536079 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.36□□□□□ -0.11
DDX55-204ENST00000536079 JPT1Q9UK76 154 aa14.36□□□□□ -0.11
DDX55-204ENST00000536079 TCF19Q9Y242 345 aa14.36□□□□□ -0.11
DDX55-204ENST00000536079 TENM1Q9UKZ4 2725 aa14.35□□□□□ -0.11
DDX55-204ENST00000536079 TRAV18A0A075B6X5 111 aa14.35□□□□□ -0.11
DDX55-204ENST00000536079 SERPINE3A8MV23 424 aa14.35□□□□□ -0.11
DDX55-204ENST00000536079 TRDCB7Z8K6 153 aa14.35□□□□□ -0.11
DDX55-204ENST00000536079 GSTT2P0CG29 244 aa14.35□□□□□ -0.11
DDX55-204ENST00000536079 GSTT2BP0CG30 244 aa14.35□□□□□ -0.11
DDX55-204ENST00000536079 MDKP21741 143 aaPredicted RBP14.35□□□□□ -0.11
DDX55-204ENST00000536079 MADCAM1Q13477 382 aa14.35□□□□□ -0.11
DDX55-204ENST00000536079 ARFRP1Q13795 201 aa14.35□□□□□ -0.11
DDX55-204ENST00000536079 AWAT1Q58HT5 328 aa14.35□□□□□ -0.11
DDX55-204ENST00000536079 HACD4Q5VWC8 232 aa14.35□□□□□ -0.11
DDX55-204ENST00000536079 Q6ZSV7 163 aa14.35□□□□□ -0.11
DDX55-204ENST00000536079 CROCCP3Q8IVE0 287 aa14.35□□□□□ -0.11
DDX55-204ENST00000536079 ODF3L1Q8IXM7 274 aa14.35□□□□□ -0.11
DDX55-204ENST00000536079 TOMM40LQ969M1 308 aa14.35□□□□□ -0.11
DDX55-204ENST00000536079 RPEQ96AT9 228 aa14.35□□□□□ -0.11
DDX55-204ENST00000536079 TIMM23O14925 209 aa14.34□□□□□ -0.11
DDX55-204ENST00000536079 YPEL1O60688 119 aa14.34□□□□□ -0.11
DDX55-204ENST00000536079 CEACAM3P40198 252 aa14.34□□□□□ -0.11
DDX55-204ENST00000536079 COMPP49747 757 aaPredicted RBP14.34□□□□□ -0.11
DDX55-204ENST00000536079 TMEM30BQ3MIR4 351 aa14.34□□□□□ -0.11
DDX55-204ENST00000536079 Q3ZCU0 254 aa14.34□□□□□ -0.11
DDX55-204ENST00000536079 DRAM1Q8N682 238 aa14.34□□□□□ -0.11
DDX55-204ENST00000536079 SAMD12Q8N8I0 201 aa14.34□□□□□ -0.11
DDX55-204ENST00000536079 SPATA3Q8NHX4 192 aa14.34□□□□□ -0.11
DDX55-204ENST00000536079 CFHR4Q92496 578 aa14.34□□□□□ -0.11
DDX55-204ENST00000536079 YPEL2Q96QA6 119 aa14.34□□□□□ -0.11
DDX55-204ENST00000536079 ABCG5Q9H222 651 aa14.34□□□□□ -0.11
DDX55-204ENST00000536079 ABCB10Q9NRK6 738 aa14.34□□□□□ -0.11
DDX55-204ENST00000536079 AMMECR1Q9Y4X0 333 aaPredicted RBP14.34□□□□□ -0.11
DDX55-204ENST00000536079 IGHV3-72A0A0B4J1Y9 119 aa14.33□□□□□ -0.12
DDX55-204ENST00000536079 HSD17B6O14756 317 aa14.33□□□□□ -0.12
DDX55-204ENST00000536079 TMEM127O75204 238 aa14.33□□□□□ -0.12
DDX55-204ENST00000536079 EIF4EP06730 217 aaKnown RBP14.33□□□□□ -0.12
DDX55-204ENST00000536079 RAG2P55895 527 aa14.33□□□□□ -0.12
DDX55-204ENST00000536079 IGSF11Q5DX21 431 aa14.33□□□□□ -0.12
DDX55-204ENST00000536079 DHRS7BQ6IAN0 325 aaPredicted RBP14.33□□□□□ -0.12
DDX55-204ENST00000536079 OR56B4Q8NH76 319 aa14.33□□□□□ -0.12
DDX55-204ENST00000536079 CREB3L1Q96BA8 519 aa14.33□□□□□ -0.12
DDX55-204ENST00000536079 ABHD14AQ9BUJ0 271 aa14.33□□□□□ -0.12
DDX55-204ENST00000536079 IFI27L2Q9H2X8 130 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms