RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 SLC22A5O76082 557 aa13.32□□□□□ -0.28
VAMP1-205ENST00000535927 TOX4O94842 621 aa13.32□□□□□ -0.28
VAMP1-205ENST00000535927 IFNA6P05013 189 aa13.32□□□□□ -0.28
VAMP1-205ENST00000535927 SCTP09683 121 aa13.32□□□□□ -0.28
VAMP1-205ENST00000535927 GSTT2P0CG29 244 aa13.32□□□□□ -0.28
VAMP1-205ENST00000535927 PRRX1P54821 245 aa13.32□□□□□ -0.28
VAMP1-205ENST00000535927 LOXL3P58215 753 aa13.32□□□□□ -0.28
VAMP1-205ENST00000535927 RNASE10Q5GAN6 216 aaKnown RBP13.32□□□□□ -0.28
VAMP1-205ENST00000535927 STEAP1BQ6NZ63 245 aa13.32□□□□□ -0.28
VAMP1-205ENST00000535927 GVQW1Q8N7I0 195 aa13.32□□□□□ -0.28
VAMP1-205ENST00000535927 SNAPC3Q92966 411 aa13.32□□□□□ -0.28
VAMP1-205ENST00000535927 BORCS5Q969J3 196 aa13.32□□□□□ -0.28
VAMP1-205ENST00000535927 TRIM63Q969Q1 353 aa13.32□□□□□ -0.28
VAMP1-205ENST00000535927 KIRREL1Q96J84 757 aa13.32□□□□□ -0.28
VAMP1-205ENST00000535927 SDHCQ99643 169 aaPredicted RBP13.32□□□□□ -0.28
VAMP1-205ENST00000535927 TMUB1Q9BVT8 246 aa13.32□□□□□ -0.28
VAMP1-205ENST00000535927 TMEM133Q9H2Q1 129 aa13.32□□□□□ -0.28
VAMP1-205ENST00000535927 C7orf69Q9H7B7 122 aa13.32□□□□□ -0.28
VAMP1-205ENST00000535927 TMEM160Q9NX00 188 aa13.32□□□□□ -0.28
VAMP1-205ENST00000535927 SDCBPO00560 298 aaPredicted RBP13.31□□□□□ -0.28
VAMP1-205ENST00000535927 OR5H8P0DN80 308 aa13.31□□□□□ -0.28
VAMP1-205ENST00000535927 IL7P13232 177 aa13.31□□□□□ -0.28
VAMP1-205ENST00000535927 MMP9P14780 707 aa13.31□□□□□ -0.28
VAMP1-205ENST00000535927 CCL3L1P16619 93 aa13.31□□□□□ -0.28
VAMP1-205ENST00000535927 SSTR5P35346 364 aa13.31□□□□□ -0.28
VAMP1-205ENST00000535927 ECI1P42126 302 aa13.31□□□□□ -0.28
VAMP1-205ENST00000535927 RAB7AP51149 207 aa13.31□□□□□ -0.28
VAMP1-205ENST00000535927 Q6ZPA2 131 aa13.31□□□□□ -0.28
VAMP1-205ENST00000535927 LINC00311Q8N616 119 aa13.31□□□□□ -0.28
VAMP1-205ENST00000535927 Q8N7P7 452 aa13.31□□□□□ -0.28
VAMP1-205ENST00000535927 ZNF596Q8TC21 504 aa13.31□□□□□ -0.28
VAMP1-205ENST00000535927 UPRTQ96BW1 309 aa13.31□□□□□ -0.28
VAMP1-205ENST00000535927 GINS4Q9BRT9 223 aa13.31□□□□□ -0.28
VAMP1-205ENST00000535927 LPAR2Q9HBW0 351 aa13.31□□□□□ -0.28
VAMP1-205ENST00000535927 GNG12Q9UBI6 72 aa13.31□□□□□ -0.28
VAMP1-205ENST00000535927 KCNS2Q9ULS6 477 aa13.31□□□□□ -0.28
VAMP1-205ENST00000535927 DISC1C4P0D8 188 aa13.3□□□□□ -0.28
VAMP1-205ENST00000535927 UPK1BO75841 260 aa13.3□□□□□ -0.28
VAMP1-205ENST00000535927 RAB3DO95716 219 aa13.3□□□□□ -0.28
VAMP1-205ENST00000535927 CD99P14209 185 aa13.3□□□□□ -0.28
VAMP1-205ENST00000535927 BAK1Q16611 211 aa13.3□□□□□ -0.28
VAMP1-205ENST00000535927 MORN2Q502X0 79 aa13.3□□□□□ -0.28
VAMP1-205ENST00000535927 PLA1AQ53H76 456 aa13.3□□□□□ -0.28
VAMP1-205ENST00000535927 LPCAT3Q6P1A2 487 aa13.3□□□□□ -0.28
VAMP1-205ENST00000535927 BEND2Q8NDZ0 799 aa13.3□□□□□ -0.28
VAMP1-205ENST00000535927 OR11H6Q8NGC7 330 aa13.3□□□□□ -0.28
VAMP1-205ENST00000535927 OR6F1Q8NGZ6 308 aa13.3□□□□□ -0.28
VAMP1-205ENST00000535927 OR9G1Q8NH87 305 aa13.3□□□□□ -0.28
VAMP1-205ENST00000535927 OR1L1Q8NH94 360 aa13.3□□□□□ -0.28
VAMP1-205ENST00000535927 RFESDQ8TAC1 157 aa13.3□□□□□ -0.28
VAMP1-205ENST00000535927 IL1F10Q8WWZ1 152 aa13.3□□□□□ -0.28
VAMP1-205ENST00000535927 GCDHQ92947 438 aaPredicted RBP13.3□□□□□ -0.28
VAMP1-205ENST00000535927 CLEC7AQ9BXN2 247 aa13.3□□□□□ -0.28
VAMP1-205ENST00000535927 GAB2Q9UQC2 676 aa13.3□□□□□ -0.28
VAMP1-205ENST00000535927 TRAV39A0A0B4J263 110 aa13.29□□□□□ -0.28
VAMP1-205ENST00000535927 MEIS3P1A6NDR6 274 aa13.29□□□□□ -0.28
VAMP1-205ENST00000535927 CD3DP04234 171 aa13.29□□□□□ -0.28
VAMP1-205ENST00000535927 HLA-DMAP28067 261 aa13.29□□□□□ -0.28
VAMP1-205ENST00000535927 HRH1P35367 487 aa13.29□□□□□ -0.28
VAMP1-205ENST00000535927 CEACAM6P40199 344 aa13.29□□□□□ -0.28
VAMP1-205ENST00000535927 UBE2E1P51965 193 aa13.29□□□□□ -0.28
VAMP1-205ENST00000535927 TSPAN5P62079 268 aa13.29□□□□□ -0.28
VAMP1-205ENST00000535927 MADCAM1Q13477 382 aa13.29□□□□□ -0.28
VAMP1-205ENST00000535927 KLF9Q13886 244 aaPredicted RBP13.29□□□□□ -0.28
VAMP1-205ENST00000535927 MSMO1Q15800 293 aa13.29□□□□□ -0.28
VAMP1-205ENST00000535927 FAHD2BQ6P2I3 314 aaPredicted RBP13.29□□□□□ -0.28
VAMP1-205ENST00000535927 H1FOOQ8IZA3 346 aaPredicted RBP13.29□□□□□ -0.28
VAMP1-205ENST00000535927 CIARTQ8N365 385 aaPredicted RBP13.29□□□□□ -0.28
VAMP1-205ENST00000535927 PRR18Q8N4B5 295 aa13.29□□□□□ -0.28
VAMP1-205ENST00000535927 FAHD2AQ96GK7 314 aa13.29□□□□□ -0.28
VAMP1-205ENST00000535927 SCGB3A2Q96PL1 93 aa13.29□□□□□ -0.28
VAMP1-205ENST00000535927 PRRT1Q99946 306 aa13.29□□□□□ -0.28
VAMP1-205ENST00000535927 EHFQ9NZC4 300 aa13.29□□□□□ -0.28
VAMP1-205ENST00000535927 SCP2D1Q9UJQ7 156 aa13.29□□□□□ -0.28
VAMP1-205ENST00000535927 OR2W1Q9Y3N9 320 aa13.29□□□□□ -0.28
VAMP1-205ENST00000535927 IGKV1D-8A0A087WSZ0 117 aa13.28□□□□□ -0.28
VAMP1-205ENST00000535927 IGKV1-6A0A0C4DH72 117 aa13.28□□□□□ -0.28
VAMP1-205ENST00000535927 TOR1AO14656 332 aa13.28□□□□□ -0.28
VAMP1-205ENST00000535927 SMAD7O15105 426 aaKnown RBP13.28□□□□□ -0.28
VAMP1-205ENST00000535927 TUSC2O75896 110 aa13.28□□□□□ -0.28
VAMP1-205ENST00000535927 FCER2P06734 321 aa13.28□□□□□ -0.28
VAMP1-205ENST00000535927 DEFA1P59665 94 aa13.28□□□□□ -0.28
VAMP1-205ENST00000535927 DEFA3P59666 94 aa13.28□□□□□ -0.28
VAMP1-205ENST00000535927 HERPUD1Q15011 391 aa13.28□□□□□ -0.28
VAMP1-205ENST00000535927 MIDNQ504T8 468 aa13.28□□□□□ -0.28
VAMP1-205ENST00000535927 IGSF11Q5DX21 431 aa13.28□□□□□ -0.28
VAMP1-205ENST00000535927 PRAMEF5Q5TYX0 476 aa13.28□□□□□ -0.28
VAMP1-205ENST00000535927 ZNF57Q68EA5 555 aaPredicted RBP13.28□□□□□ -0.28
VAMP1-205ENST00000535927 VMO1Q7Z5L0 202 aa13.28□□□□□ -0.28
VAMP1-205ENST00000535927 ABHD12Q8N2K0 398 aa13.28□□□□□ -0.28
VAMP1-205ENST00000535927 MAPK1IP1LQ8NDC0 245 aa13.28□□□□□ -0.28
VAMP1-205ENST00000535927 MAFIPQ8WZ33 124 aa13.28□□□□□ -0.28
VAMP1-205ENST00000535927 SLC2A8Q9NY64 477 aa13.28□□□□□ -0.28
VAMP1-205ENST00000535927 ZNF69Q9UC07 566 aa13.28□□□□□ -0.28
VAMP1-205ENST00000535927 AMMECR1Q9Y4X0 333 aaPredicted RBP13.28□□□□□ -0.28
VAMP1-205ENST00000535927 FLNAP21333 2647 aaKnown RBP13.28□□□□□ -0.28
VAMP1-205ENST00000535927 CSPG4Q6UVK1 2322 aa13.27□□□□□ -0.28
VAMP1-205ENST00000535927 BET1O15155 118 aa13.27□□□□□ -0.29
VAMP1-205ENST00000535927 LANCL1O43813 399 aa13.27□□□□□ -0.29
VAMP1-205ENST00000535927 NFYBP25208 207 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms