RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 MRPL41Q8IXM3 137 aaKnown RBP12.77□□□□□ -0.37
CLSTN3-204ENST00000535313 GAPTQ8N292 157 aa12.77□□□□□ -0.37
CLSTN3-204ENST00000535313 Q8N9W7 124 aa12.77□□□□□ -0.37
CLSTN3-204ENST00000535313 KLHL30-AS1Q8NEE0 82 aa12.77□□□□□ -0.37
CLSTN3-204ENST00000535313 OR8H1Q8NGG4 311 aa12.77□□□□□ -0.37
CLSTN3-204ENST00000535313 FAM46BQ96A09 425 aa12.77□□□□□ -0.37
CLSTN3-204ENST00000535313 Q96M66 194 aa12.77□□□□□ -0.37
CLSTN3-204ENST00000535313 RASL11BQ9BPW5 248 aa12.77□□□□□ -0.37
CLSTN3-204ENST00000535313 CST11Q9H112 138 aa12.77□□□□□ -0.37
CLSTN3-204ENST00000535313 ABCG5Q9H222 651 aa12.77□□□□□ -0.37
CLSTN3-204ENST00000535313 OR2S2Q9NQN1 319 aa12.77□□□□□ -0.37
CLSTN3-204ENST00000535313 LINC01548A6NM66 108 aa12.76□□□□□ -0.37
CLSTN3-204ENST00000535313 PDCD6O75340 191 aa12.76□□□□□ -0.37
CLSTN3-204ENST00000535313 SC5DO75845 299 aa12.76□□□□□ -0.37
CLSTN3-204ENST00000535313 VHLP40337 213 aa12.76□□□□□ -0.37
CLSTN3-204ENST00000535313 ZNF134P52741 427 aa12.76□□□□□ -0.37
CLSTN3-204ENST00000535313 ZNF137PP52743 207 aa12.76□□□□□ -0.37
CLSTN3-204ENST00000535313 PNLIPRP3Q17RR3 467 aa12.76□□□□□ -0.37
CLSTN3-204ENST00000535313 CT45A1Q5HYN5 189 aa12.76□□□□□ -0.37
CLSTN3-204ENST00000535313 ETV3LQ6ZN32 361 aa12.76□□□□□ -0.37
CLSTN3-204ENST00000535313 C8orf86Q6ZUL3 223 aa12.76□□□□□ -0.37
CLSTN3-204ENST00000535313 MS4A15Q8N5U1 240 aa12.76□□□□□ -0.37
CLSTN3-204ENST00000535313 ZNF439Q8NDP4 499 aa12.76□□□□□ -0.37
CLSTN3-204ENST00000535313 CT45A3Q8NHU0 189 aa12.76□□□□□ -0.37
CLSTN3-204ENST00000535313 S1PR3Q99500 378 aa12.76□□□□□ -0.37
CLSTN3-204ENST00000535313 MCRIP2Q9BUT9 160 aaKnown RBP12.76□□□□□ -0.37
CLSTN3-204ENST00000535313 MND1Q9BWT6 205 aa12.76□□□□□ -0.37
CLSTN3-204ENST00000535313 TAF9BQ9HBM6 251 aa12.76□□□□□ -0.37
CLSTN3-204ENST00000535313 FKBP14Q9NWM8 211 aa12.76□□□□□ -0.37
CLSTN3-204ENST00000535313 ZNF736B4DX44 427 aaPredicted RBP12.75□□□□□ -0.37
CLSTN3-204ENST00000535313 UBBP0CG47 229 aa12.75□□□□□ -0.37
CLSTN3-204ENST00000535313 MYCNOSP40205 109 aa12.75□□□□□ -0.37
CLSTN3-204ENST00000535313 ACSM3Q53FZ2 586 aa12.75□□□□□ -0.37
CLSTN3-204ENST00000535313 NKAPLQ5M9Q1 402 aa12.75□□□□□ -0.37
CLSTN3-204ENST00000535313 GLT8D1Q68CQ7 371 aa12.75□□□□□ -0.37
CLSTN3-204ENST00000535313 SIGIRRQ6IA17 410 aa12.75□□□□□ -0.37
CLSTN3-204ENST00000535313 C18orf65Q6ZTR6 163 aa12.75□□□□□ -0.37
CLSTN3-204ENST00000535313 ZNF554Q86TJ5 538 aa12.75□□□□□ -0.37
CLSTN3-204ENST00000535313 ZNF695Q8IW36 515 aa12.75□□□□□ -0.37
CLSTN3-204ENST00000535313 PLSCR3Q9NRY6 295 aa12.75□□□□□ -0.37
CLSTN3-204ENST00000535313 MBNL3Q9NUK0 354 aaKnown RBP12.75□□□□□ -0.37
CLSTN3-204ENST00000535313 K7EIL1 84 aa12.74□□□□□ -0.37
CLSTN3-204ENST00000535313 LANCL1O43813 399 aa12.74□□□□□ -0.37
CLSTN3-204ENST00000535313 CDK1P06493 297 aa12.74□□□□□ -0.37
CLSTN3-204ENST00000535313 HOXD3P31249 432 aaPredicted RBP12.74□□□□□ -0.37
CLSTN3-204ENST00000535313 KRTAP10-11P60412 298 aa12.74□□□□□ -0.37
CLSTN3-204ENST00000535313 MORN2Q502X0 79 aa12.74□□□□□ -0.37
CLSTN3-204ENST00000535313 CXorf66Q5JRM2 361 aaPredicted RBP12.74□□□□□ -0.37
CLSTN3-204ENST00000535313 RNLSQ5VYX0 342 aa12.74□□□□□ -0.37
CLSTN3-204ENST00000535313 NEDD4LQ96PU5 975 aa12.74□□□□□ -0.37
CLSTN3-204ENST00000535313 ABHD14AQ9BUJ0 271 aa12.74□□□□□ -0.37
CLSTN3-204ENST00000535313 TMED9Q9BVK6 235 aa12.74□□□□□ -0.37
CLSTN3-204ENST00000535313 JPT1Q9UK76 154 aa12.74□□□□□ -0.37
CLSTN3-204ENST00000535313 PTGES3LE9PB15 166 aa12.73□□□□□ -0.37
CLSTN3-204ENST00000535313 RGS11O94810 467 aa12.73□□□□□ -0.37
CLSTN3-204ENST00000535313 SOX6P35712 828 aa12.73□□□□□ -0.37
CLSTN3-204ENST00000535313 F2RL1P55085 397 aa12.73□□□□□ -0.37
CLSTN3-204ENST00000535313 EGFEM1PQ0D2K5 195 aa12.73□□□□□ -0.37
CLSTN3-204ENST00000535313 LSAMPQ13449 338 aa12.73□□□□□ -0.37
CLSTN3-204ENST00000535313 INSL4Q14641 139 aa12.73□□□□□ -0.37
CLSTN3-204ENST00000535313 DEFB121Q5J5C9 76 aa12.73□□□□□ -0.37
CLSTN3-204ENST00000535313 RBM48Q5RL73 367 aaKnown RBP12.73□□□□□ -0.37
CLSTN3-204ENST00000535313 UNQ9370/PRO34162Q6UXP9 181 aa12.73□□□□□ -0.37
CLSTN3-204ENST00000535313 OR52L2PQ8NGH6 319 aa12.73□□□□□ -0.37
CLSTN3-204ENST00000535313 MRPL30Q8TCC3 161 aaKnown RBP12.73□□□□□ -0.37
CLSTN3-204ENST00000535313 PHYHIPQ92561 330 aa12.73□□□□□ -0.37
CLSTN3-204ENST00000535313 P2RX4Q99571 388 aa12.73□□□□□ -0.37
CLSTN3-204ENST00000535313 SCN3BQ9NY72 215 aa12.73□□□□□ -0.37
CLSTN3-204ENST00000535313 LRRC42Q9Y546 428 aa12.73□□□□□ -0.37
CLSTN3-204ENST00000535313 RPLP1P05386 114 aaKnown RBP12.72□□□□□ -0.37
CLSTN3-204ENST00000535313 ELANEP08246 267 aa12.72□□□□□ -0.37
CLSTN3-204ENST00000535313 VDAC1P21796 283 aa12.72□□□□□ -0.37
CLSTN3-204ENST00000535313 MYF6P23409 242 aa12.72□□□□□ -0.37
CLSTN3-204ENST00000535313 PPP1CCP36873 323 aaKnown RBP12.72□□□□□ -0.37
CLSTN3-204ENST00000535313 HTD2P86397 168 aa12.72□□□□□ -0.37
CLSTN3-204ENST00000535313 FOXE3Q13461 319 aa12.72□□□□□ -0.37
CLSTN3-204ENST00000535313 GNMTQ14749 295 aa12.72□□□□□ -0.37
CLSTN3-204ENST00000535313 SPHARQ15513 63 aa12.72□□□□□ -0.37
CLSTN3-204ENST00000535313 FAM27D1Q5T7N8 215 aa12.72□□□□□ -0.37
CLSTN3-204ENST00000535313 CEACAM19Q7Z692 300 aa12.72□□□□□ -0.37
CLSTN3-204ENST00000535313 FAM71E2Q8N5Q1 922 aa12.72□□□□□ -0.37
CLSTN3-204ENST00000535313 GALMQ96C23 342 aa12.72□□□□□ -0.37
CLSTN3-204ENST00000535313 TMEM59Q9BXS4 323 aa12.72□□□□□ -0.37
CLSTN3-204ENST00000535313 ANKRD60Q9BZ19 345 aa12.72□□□□□ -0.37
CLSTN3-204ENST00000535313 WI2-2373I1.2A0A1W2PRP0 233 aa12.71□□□□□ -0.37
CLSTN3-204ENST00000535313 CCL24O00175 119 aa12.71□□□□□ -0.37
CLSTN3-204ENST00000535313 YPEL1O60688 119 aa12.71□□□□□ -0.37
CLSTN3-204ENST00000535313 VSIG8P0DPA2 414 aa12.71□□□□□ -0.37
CLSTN3-204ENST00000535313 SRMP19623 302 aa12.71□□□□□ -0.37
CLSTN3-204ENST00000535313 CHATP28329 748 aa12.71□□□□□ -0.37
CLSTN3-204ENST00000535313 GP2P55259 537 aaKnown RBP12.71□□□□□ -0.37
CLSTN3-204ENST00000535313 RAB25P57735 213 aa12.71□□□□□ -0.37
CLSTN3-204ENST00000535313 RPS27AP62979 156 aaKnown RBP12.71□□□□□ -0.37
CLSTN3-204ENST00000535313 MED22Q15528 200 aa12.71□□□□□ -0.37
CLSTN3-204ENST00000535313 MMDQ15546 238 aa12.71□□□□□ -0.37
CLSTN3-204ENST00000535313 HSD17B12Q53GQ0 312 aa12.71□□□□□ -0.37
CLSTN3-204ENST00000535313 C1orf100Q5SVJ3 147 aa12.71□□□□□ -0.37
CLSTN3-204ENST00000535313 C6orf141Q5SZD1 244 aa12.71□□□□□ -0.37
CLSTN3-204ENST00000535313 OR10K2Q6IF99 312 aa12.71□□□□□ -0.37
CLSTN3-204ENST00000535313 LRRTM1Q86UE6 522 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms