RNA–Protein interactions for RNA: ENST00000535147.5

DDB1-204, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,789 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-204ENST00000535147 SIRT7Q9NRC8 400 aa8.74□□□□□ -1.01
DDB1-204ENST00000535147 TCFL5Q9UL49 500 aa8.74□□□□□ -1.01
DDB1-204ENST00000535147 DOCK10Q96BY6 2186 aa8.74□□□□□ -1.01
DDB1-204ENST00000535147 CXorf65A6NEN9 183 aa8.73□□□□□ -1.01
DDB1-204ENST00000535147 CYTIPO60759 359 aa8.73□□□□□ -1.01
DDB1-204ENST00000535147 FABP4P15090 132 aa8.73□□□□□ -1.01
DDB1-204ENST00000535147 ZNF324BQ6AW86 544 aaPredicted RBP8.73□□□□□ -1.01
DDB1-204ENST00000535147 OR10J5Q8NHC4 309 aa8.73□□□□□ -1.01
DDB1-204ENST00000535147 PRDM13Q9H4Q3 707 aa8.73□□□□□ -1.01
DDB1-204ENST00000535147 OR2W1Q9Y3N9 320 aa8.73□□□□□ -1.01
DDB1-204ENST00000535147 TRAV24A0A0B4J272 114 aa8.73□□□□□ -1.01
DDB1-204ENST00000535147 PATE3B3GLJ2 98 aa8.73□□□□□ -1.01
DDB1-204ENST00000535147 SEC14L6B5MCN3 397 aa8.73□□□□□ -1.01
DDB1-204ENST00000535147 DFFBO76075 338 aa8.73□□□□□ -1.01
DDB1-204ENST00000535147 CNOT4O95628 575 aaKnown RBP8.73□□□□□ -1.01
DDB1-204ENST00000535147 CELA3AP09093 270 aa8.73□□□□□ -1.01
DDB1-204ENST00000535147 BCL2P10415 239 aa8.73□□□□□ -1.01
DDB1-204ENST00000535147 ZFP36L1Q07352 338 aaKnown RBP8.73□□□□□ -1.01
DDB1-204ENST00000535147 SPINK14Q6IE38 97 aa8.73□□□□□ -1.01
DDB1-204ENST00000535147 HAPLN4Q86UW8 402 aa8.73□□□□□ -1.01
DDB1-204ENST00000535147 SCGB1C1Q8TD33 95 aa8.73□□□□□ -1.01
DDB1-204ENST00000535147 PSMF1Q92530 271 aa8.73□□□□□ -1.01
DDB1-204ENST00000535147 CLDN23Q96B33 292 aa8.73□□□□□ -1.01
DDB1-204ENST00000535147 PPP1R3CQ9UQK1 317 aa8.73□□□□□ -1.01
DDB1-204ENST00000535147 CACNA1DQ01668 2161 aa8.73□□□□□ -1.01
DDB1-204ENST00000535147 MED12LQ86YW9 2145 aa8.73□□□□□ -1.01
DDB1-204ENST00000535147 PGA5P0DJD9 388 aa8.73□□□□□ -1.01
DDB1-204ENST00000535147 GPX4P36969 197 aaPredicted RBP8.73□□□□□ -1.01
DDB1-204ENST00000535147 ELLP55199 621 aaPredicted RBP8.73□□□□□ -1.01
DDB1-204ENST00000535147 OR8G1Q15617 311 aa8.73□□□□□ -1.01
DDB1-204ENST00000535147 BEND4Q6ZU67 534 aa8.73□□□□□ -1.01
DDB1-204ENST00000535147 PPP1R32Q7Z5V6 425 aa8.73□□□□□ -1.01
DDB1-204ENST00000535147 TUSC5Q8IXB3 177 aa8.73□□□□□ -1.01
DDB1-204ENST00000535147 H1FOOQ8IZA3 346 aaPredicted RBP8.73□□□□□ -1.01
DDB1-204ENST00000535147 RCC1LQ96I51 464 aaKnown RBP8.73□□□□□ -1.01
DDB1-204ENST00000535147 LRFN1Q9P244 771 aa8.73□□□□□ -1.01
DDB1-204ENST00000535147 DOCK11Q5JSL3 2073 aa8.72□□□□□ -1.01
DDB1-204ENST00000535147 TRAV1-1A0A0B4J248 108 aa8.72□□□□□ -1.01
DDB1-204ENST00000535147 IGHV3-64DA0A0J9YX35 117 aa8.72□□□□□ -1.01
DDB1-204ENST00000535147 A0A1B0GU03 582 aa8.72□□□□□ -1.01
DDB1-204ENST00000535147 CEBPZOSA8MTT3 80 aa8.72□□□□□ -1.01
DDB1-204ENST00000535147 HMGB3O15347 200 aaKnown RBP8.72□□□□□ -1.01
DDB1-204ENST00000535147 SYNGR2O43760 224 aa8.72□□□□□ -1.01
DDB1-204ENST00000535147 RHBDL1O75783 438 aa8.72□□□□□ -1.01
DDB1-204ENST00000535147 CD55P08174 381 aa8.72□□□□□ -1.01
DDB1-204ENST00000535147 CTXN2P0C2S0 81 aa8.72□□□□□ -1.01
DDB1-204ENST00000535147 GAMTQ14353 236 aa8.72□□□□□ -1.01
DDB1-204ENST00000535147 SRSF7Q16629 238 aaKnown RBP eCLIP8.72□□□□□ -1.01
DDB1-204ENST00000535147 ZNF600Q6ZNG1 722 aa8.72□□□□□ -1.01
DDB1-204ENST00000535147 C1orf87Q8N0U7 546 aa8.72□□□□□ -1.01
DDB1-204ENST00000535147 CA5BP1Q8WTZ4 195 aa8.72□□□□□ -1.01
DDB1-204ENST00000535147 IL22RA2Q969J5 263 aa8.72□□□□□ -1.01
DDB1-204ENST00000535147 S100PBPQ96BU1 408 aa8.72□□□□□ -1.01
DDB1-204ENST00000535147 SNX22Q96L94 193 aa8.72□□□□□ -1.01
DDB1-204ENST00000535147 PLK3Q9H4B4 646 aa8.72□□□□□ -1.01
DDB1-204ENST00000535147 PSENENQ9NZ42 101 aa8.72□□□□□ -1.01
DDB1-204ENST00000535147 OR14J1Q9UGF5 321 aa8.72□□□□□ -1.01
DDB1-204ENST00000535147 CD300LBA8K4G0 201 aa8.72□□□□□ -1.01
DDB1-204ENST00000535147 CLDN34H7C241 214 aa8.72□□□□□ -1.01
DDB1-204ENST00000535147 GATCO43716 136 aaKnown RBP8.72□□□□□ -1.01
DDB1-204ENST00000535147 IGKV1-5P01602 117 aa8.72□□□□□ -1.01
DDB1-204ENST00000535147 IGLV2-14P01704 120 aa8.72□□□□□ -1.01
DDB1-204ENST00000535147 GFRA1P56159 465 aa8.72□□□□□ -1.01
DDB1-204ENST00000535147 DEFA6Q01524 100 aa8.72□□□□□ -1.01
DDB1-204ENST00000535147 SPANXN5Q5MJ07 72 aa8.72□□□□□ -1.01
DDB1-204ENST00000535147 DPPA3Q6W0C5 159 aa8.72□□□□□ -1.01
DDB1-204ENST00000535147 ZNF525Q8N782 197 aa8.72□□□□□ -1.01
DDB1-204ENST00000535147 RAB40CQ96S21 281 aa8.72□□□□□ -1.01
DDB1-204ENST00000535147 USF3Q68DE3 2245 aa8.71□□□□□ -1.01
DDB1-204ENST00000535147 OR5H1A6NKK0 313 aa8.71□□□□□ -1.01
DDB1-204ENST00000535147 SFTPCP11686 197 aa8.71□□□□□ -1.01
DDB1-204ENST00000535147 HIST1H1BP16401 226 aaKnown RBP8.71□□□□□ -1.01
DDB1-204ENST00000535147 RNPS1Q15287 305 aaKnown RBP8.71□□□□□ -1.01
DDB1-204ENST00000535147 WDR25Q64LD2 544 aaPredicted RBP8.71□□□□□ -1.01
DDB1-204ENST00000535147 UNQ6494/PRO21346Q6UXR6 183 aa8.71□□□□□ -1.01
DDB1-204ENST00000535147 VASH2Q86V25 355 aa8.71□□□□□ -1.01
DDB1-204ENST00000535147 SAXO1Q8IYX7 474 aa8.71□□□□□ -1.01
DDB1-204ENST00000535147 TDHQ8IZJ6 230 aa8.71□□□□□ -1.01
DDB1-204ENST00000535147 HIST1H2AAQ96QV6 131 aa8.71□□□□□ -1.01
DDB1-204ENST00000535147 HIPK2Q9H2X6 1198 aa8.71□□□□□ -1.01
DDB1-204ENST00000535147 PRO1933Q9H354 126 aa8.71□□□□□ -1.01
DDB1-204ENST00000535147 RBKSQ9H477 322 aa8.71□□□□□ -1.01
DDB1-204ENST00000535147 SDF2L1Q9HCN8 221 aa8.71□□□□□ -1.01
DDB1-204ENST00000535147 DLL3Q9NYJ7 618 aa8.71□□□□□ -1.01
DDB1-204ENST00000535147 CISD1Q9NZ45 108 aaKnown RBP8.71□□□□□ -1.01
DDB1-204ENST00000535147 RBM7Q9Y580 266 aaKnown RBP8.71□□□□□ -1.01
DDB1-204ENST00000535147 GTF3C1Q12789 2109 aa8.71□□□□□ -1.02
DDB1-204ENST00000535147 NBEAQ8NFP9 2946 aa8.71□□□□□ -1.02
DDB1-204ENST00000535147 A0A1W2PR80 420 aa8.71□□□□□ -1.02
DDB1-204ENST00000535147 WDR1O75083 606 aa8.71□□□□□ -1.02
DDB1-204ENST00000535147 CYB5R3P00387 301 aaPredicted RBP8.71□□□□□ -1.02
DDB1-204ENST00000535147 S100GP29377 79 aa8.71□□□□□ -1.02
DDB1-204ENST00000535147 CYB561P49447 251 aa8.71□□□□□ -1.02
DDB1-204ENST00000535147 CLEC12BQ2HXU8 276 aa8.71□□□□□ -1.02
DDB1-204ENST00000535147 SPATA46Q5T0L3 261 aa8.71□□□□□ -1.02
DDB1-204ENST00000535147 NECAP1Q8NC96 275 aa8.71□□□□□ -1.02
DDB1-204ENST00000535147 OR10V1Q8NGI7 309 aa8.71□□□□□ -1.02
DDB1-204ENST00000535147 APOBEC3DQ96AK3 386 aaPredicted RBP8.71□□□□□ -1.02
DDB1-204ENST00000535147 CABLES2Q9BTV7 478 aa8.71□□□□□ -1.02
DDB1-204ENST00000535147 HES7Q9BYE0 225 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms