RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 BOLLQ8N9W6 283 aaKnown RBP10.33□□□□□ -0.76
SCARB1-204ENST00000535005 Q8NFD4 153 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 C2CD4CQ8TF44 421 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 MRGPRFQ96AM1 343 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 C1orf147Q96MC9 270 aaPredicted RBP10.33□□□□□ -0.76
SCARB1-204ENST00000535005 OCSTAMPQ9BR26 566 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 TMPRSS5Q9H3S3 457 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 UFSP2Q9NUQ7 469 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 C1orf123Q9NWV4 160 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 IL36GQ9NZH8 169 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 PPP1R3CQ9UQK1 317 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 MRPS28Q9Y2Q9 187 aaKnown RBP10.33□□□□□ -0.76
SCARB1-204ENST00000535005 IGKV1-12A0A0C4DH73 117 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 IGHV3-64DA0A0J9YX35 117 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 TMEM235A6NFC5 223 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 A6NLC8 198 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 FAM157AC9JC47 383 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 RAB27BO00194 218 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 SYNGR1O43759 233 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 HTR3BO95264 441 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 IGKV1D-12P01611 117 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 IGHV2-5P01817 119 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 GLAP06280 429 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 CHRM2P08172 466 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 GSTP1P09211 210 aaKnown RBP10.33□□□□□ -0.76
SCARB1-204ENST00000535005 PGA5P0DJD9 388 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 MAS1LP35410 378 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 EFNA4P52798 201 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 SSTP61278 116 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 ERVK11-1P61568 191 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 SRSF3P84103 164 aaKnown RBP10.33□□□□□ -0.76
SCARB1-204ENST00000535005 RHEBQ15382 184 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 KCTD9Q7L273 389 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 C1QL4Q86Z23 238 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 POC1AQ8NBT0 407 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 OR5D18Q8NGL1 313 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 OR11L1Q8NGX0 322 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 OR10R2Q8NGX6 335 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 OR51F2Q8NH61 342 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 KIRREL1Q96J84 757 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 C2orf50Q96LR7 162 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 NKX3-1Q99801 234 aaPredicted RBP10.33□□□□□ -0.76
SCARB1-204ENST00000535005 SULT4A1Q9BR01 284 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 SLC5A7Q9GZV3 580 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 NIT2Q9NQR4 276 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 MTCH1Q9NZJ7 389 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 CACFD1Q9UGQ2 172 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 USF3Q68DE3 2245 aa10.32□□□□□ -0.76
SCARB1-204ENST00000535005 IGHV1-69-2A0A0G2JMI3 117 aa10.32□□□□□ -0.76
SCARB1-204ENST00000535005 SPRY1O43609 319 aaPredicted RBP10.32□□□□□ -0.76
SCARB1-204ENST00000535005 ANGPTL7O43827 346 aa10.32□□□□□ -0.76
SCARB1-204ENST00000535005 RHBDL1O75783 438 aa10.32□□□□□ -0.76
SCARB1-204ENST00000535005 LHBP01229 141 aa10.32□□□□□ -0.76
SCARB1-204ENST00000535005 IGHV2-70P01814 119 aa10.32□□□□□ -0.76
SCARB1-204ENST00000535005 RAB5CP51148 216 aa10.32□□□□□ -0.76
SCARB1-204ENST00000535005 DNLZQ5SXM8 178 aa10.32□□□□□ -0.76
SCARB1-204ENST00000535005 GLIPR1L1Q6UWM5 242 aa10.32□□□□□ -0.76
SCARB1-204ENST00000535005 ZNF826PQ6ZT77 177 aa10.32□□□□□ -0.76
SCARB1-204ENST00000535005 Q8IYB0 196 aa10.32□□□□□ -0.76
SCARB1-204ENST00000535005 TERB2Q8NHR7 220 aa10.32□□□□□ -0.76
SCARB1-204ENST00000535005 CASTOR1Q8WTX7 329 aa10.32□□□□□ -0.76
SCARB1-204ENST00000535005 NRGNQ92686 78 aa10.32□□□□□ -0.76
SCARB1-204ENST00000535005 RDH5Q92781 318 aa10.32□□□□□ -0.76
SCARB1-204ENST00000535005 METTL9Q9H1A3 318 aa10.32□□□□□ -0.76
SCARB1-204ENST00000535005 KCNK15Q9H427 330 aa10.32□□□□□ -0.76
SCARB1-204ENST00000535005 RNF7Q9UBF6 113 aa10.32□□□□□ -0.76
SCARB1-204ENST00000535005 DMRT1Q9Y5R6 373 aa10.32□□□□□ -0.76
SCARB1-204ENST00000535005 NAV2Q8IVL1 2488 aa10.31□□□□□ -0.76
SCARB1-204ENST00000535005 POLQO75417 2590 aa10.31□□□□□ -0.76
SCARB1-204ENST00000535005 TRAV20A0A0B4J274 112 aa10.31□□□□□ -0.76
SCARB1-204ENST00000535005 JTBO76095 146 aa10.31□□□□□ -0.76
SCARB1-204ENST00000535005 ZNF44P15621 663 aa10.31□□□□□ -0.76
SCARB1-204ENST00000535005 FPR2P25090 351 aa10.31□□□□□ -0.76
SCARB1-204ENST00000535005 NFYBP25208 207 aa10.31□□□□□ -0.76
SCARB1-204ENST00000535005 QRFPP83859 136 aa10.31□□□□□ -0.76
SCARB1-204ENST00000535005 SURF2Q15527 256 aaPredicted RBP10.31□□□□□ -0.76
SCARB1-204ENST00000535005 ZFP82Q8N141 532 aa10.31□□□□□ -0.76
SCARB1-204ENST00000535005 RRNAD1Q96FB5 475 aaKnown RBP10.31□□□□□ -0.76
SCARB1-204ENST00000535005 S100A13Q99584 98 aa10.31□□□□□ -0.76
SCARB1-204ENST00000535005 HRH4Q9H3N8 390 aa10.31□□□□□ -0.76
SCARB1-204ENST00000535005 C13orf42A0A1B0GVH6 325 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 LRRC30A6NM36 301 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 TMEM14DPA8MWL7 114 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 SRRM5B3KS81 715 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 TRAPPC2LH3BP13 241 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 TMEM178BH3BS89 294 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 AP4M1O00189 453 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 MED6O75586 246 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 FSTL3O95633 263 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 HKR1P10072 659 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 DAOP14920 347 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 AKR1C4P17516 323 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 COL8A2P25067 703 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 HRH1P35367 487 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 ECI1P42126 302 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 TMEM268Q5VZI3 342 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 SLC16A13Q7RTY0 426 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 PEG10Q86TG7 708 aaKnown RBP10.3□□□□□ -0.76
SCARB1-204ENST00000535005 GCSAMQ8N6F7 178 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 LRRC29Q8WV35 223 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms