RNA–Protein interactions for RNA: ENST00000534382.5

CTSB-231, Transcript of cathepsin B, human

TSL 4

Gene CTSB, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-231	ENST00000534382	ARHGAP5-AS1	Q96IT6	56 aa		11.64	□□□□□ -0.55
CTSB-231	ENST00000534382	KCTD7	Q96MP8	289 aa		11.64	□□□□□ -0.55
CTSB-231	ENST00000534382	CITED1	Q99966	193 aa		11.64	□□□□□ -0.55
CTSB-231	ENST00000534382	CHCHD6	Q9BRQ6	235 aa		11.64	□□□□□ -0.55
CTSB-231	ENST00000534382	PECR	Q9BY49	303 aa		11.64	□□□□□ -0.55
CTSB-231	ENST00000534382	CHMP1A	Q9HD42	196 aa	Predicted RBP	11.64	□□□□□ -0.55
CTSB-231	ENST00000534382	OR2S2	Q9NQN1	319 aa		11.64	□□□□□ -0.55
CTSB-231	ENST00000534382	AK3	Q9UIJ7	227 aa		11.64	□□□□□ -0.55
CTSB-231	ENST00000534382	SIGLEC9	Q9Y336	463 aa		11.64	□□□□□ -0.55
CTSB-231	ENST00000534382	TRBV6-6	A0A0A6YYG2	114 aa		11.63	□□□□□ -0.55
CTSB-231	ENST00000534382		A0A0B4J203	849 aa		11.63	□□□□□ -0.55
CTSB-231	ENST00000534382		A0A1W2PPI3	338 aa		11.63	□□□□□ -0.55
CTSB-231	ENST00000534382	SMIM30	A4D0T7	59 aa		11.63	□□□□□ -0.55
CTSB-231	ENST00000534382	FAM90A9P	A6NNJ1	464 aa		11.63	□□□□□ -0.55
CTSB-231	ENST00000534382	TIMM23	O14925	209 aa		11.63	□□□□□ -0.55
CTSB-231	ENST00000534382	GAPDH	P04406	335 aa	Known RBP	11.63	□□□□□ -0.55
CTSB-231	ENST00000534382	FAM106CP	P0CH98	169 aa		11.63	□□□□□ -0.55
CTSB-231	ENST00000534382	SLC2A2	P11168	524 aa	Predicted RBP	11.63	□□□□□ -0.55
CTSB-231	ENST00000534382	ZNF134	P52741	427 aa		11.63	□□□□□ -0.55
CTSB-231	ENST00000534382	EFNB2	P52799	333 aa		11.63	□□□□□ -0.55
CTSB-231	ENST00000534382	ZNF816	Q0VGE8	651 aa	Predicted RBP	11.63	□□□□□ -0.55
CTSB-231	ENST00000534382	HMGN3	Q15651	99 aa		11.63	□□□□□ -0.55
CTSB-231	ENST00000534382	MORN2	Q502X0	79 aa		11.63	□□□□□ -0.55
CTSB-231	ENST00000534382	CT45A1	Q5HYN5	189 aa		11.63	□□□□□ -0.55
CTSB-231	ENST00000534382	PLAC9	Q5JTB6	97 aa		11.63	□□□□□ -0.55
CTSB-231	ENST00000534382	STEAP3	Q658P3	488 aa		11.63	□□□□□ -0.55
CTSB-231	ENST00000534382	C11orf88	Q6PI97	169 aa		11.63	□□□□□ -0.55
CTSB-231	ENST00000534382	SLC25A48	Q6ZT89	311 aa	Known RBP	11.63	□□□□□ -0.55
CTSB-231	ENST00000534382	C5orf24	Q7Z6I8	188 aa		11.63	□□□□□ -0.55
CTSB-231	ENST00000534382	THNSL2	Q86YJ6	484 aa		11.63	□□□□□ -0.55
CTSB-231	ENST00000534382		Q8N2B8	174 aa		11.63	□□□□□ -0.55
CTSB-231	ENST00000534382	ZNF439	Q8NDP4	499 aa		11.63	□□□□□ -0.55
CTSB-231	ENST00000534382	OR52L2P	Q8NGH6	319 aa		11.63	□□□□□ -0.55
CTSB-231	ENST00000534382	CT45A3	Q8NHU0	189 aa		11.63	□□□□□ -0.55
CTSB-231	ENST00000534382	CAPSL	Q8WWF8	208 aa		11.63	□□□□□ -0.55
CTSB-231	ENST00000534382	PTX4	Q96A99	478 aa		11.63	□□□□□ -0.55
CTSB-231	ENST00000534382	AKR1E2	Q96JD6	320 aa		11.63	□□□□□ -0.55
CTSB-231	ENST00000534382	PRSS22	Q9GZN4	317 aa		11.63	□□□□□ -0.55
CTSB-231	ENST00000534382	ZNF696	Q9H7X3	374 aa		11.63	□□□□□ -0.55
CTSB-231	ENST00000534382	ZNF702P	Q9H963	129 aa		11.63	□□□□□ -0.55
CTSB-231	ENST00000534382	VCX3A	Q9NNX9	186 aa		11.63	□□□□□ -0.55
CTSB-231	ENST00000534382	ABRACL	Q9P1F3	81 aa		11.63	□□□□□ -0.55
CTSB-231	ENST00000534382	JPT1	Q9UK76	154 aa		11.63	□□□□□ -0.55
CTSB-231	ENST00000534382	LOC100506127	A0A0U1RQW1	187 aa		11.62	□□□□□ -0.55
CTSB-231	ENST00000534382	HSD17B6	O14756	317 aa		11.62	□□□□□ -0.55
CTSB-231	ENST00000534382	SLC31A2	O15432	143 aa		11.62	□□□□□ -0.55
CTSB-231	ENST00000534382	OR2F2	O95006	317 aa		11.62	□□□□□ -0.55
CTSB-231	ENST00000534382	IL3RA	P26951	378 aa		11.62	□□□□□ -0.55
CTSB-231	ENST00000534382	SDC2	P34741	201 aa		11.62	□□□□□ -0.55
CTSB-231	ENST00000534382		Q6ZPA2	131 aa		11.62	□□□□□ -0.55
CTSB-231	ENST00000534382	MOB1B	Q7L9L4	216 aa		11.62	□□□□□ -0.55
CTSB-231	ENST00000534382	DRAM1	Q8N682	238 aa		11.62	□□□□□ -0.55
CTSB-231	ENST00000534382	OR56B4	Q8NH76	319 aa		11.62	□□□□□ -0.55
CTSB-231	ENST00000534382	SETD6	Q8TBK2	473 aa		11.62	□□□□□ -0.55
CTSB-231	ENST00000534382	CFHR4	Q92496	578 aa		11.62	□□□□□ -0.55
CTSB-231	ENST00000534382	ST6GALNAC6	Q969X2	333 aa		11.62	□□□□□ -0.55
CTSB-231	ENST00000534382	RAB3C	Q96E17	227 aa		11.62	□□□□□ -0.55
CTSB-231	ENST00000534382	RBM14	Q96PK6	669 aa	Known RBP	11.62	□□□□□ -0.55
CTSB-231	ENST00000534382	CMSS1	Q9BQ75	279 aa	Known RBP	11.62	□□□□□ -0.55
CTSB-231	ENST00000534382	HDHD3	Q9BSH5	251 aa	Predicted RBP	11.62	□□□□□ -0.55
CTSB-231	ENST00000534382	RNF167	Q9H6Y7	350 aa		11.62	□□□□□ -0.55
CTSB-231	ENST00000534382	IGHV1-3	A0A0C4DH29	117 aa		11.61	□□□□□ -0.55
CTSB-231	ENST00000534382	METTL21EP	A6NDL7	271 aa		11.61	□□□□□ -0.55
CTSB-231	ENST00000534382	YPEL1	O60688	119 aa		11.61	□□□□□ -0.55
CTSB-231	ENST00000534382	RGS11	O94810	467 aa		11.61	□□□□□ -0.55
CTSB-231	ENST00000534382	SNRNP70	P08621	437 aa	Known RBP	11.61	□□□□□ -0.55
CTSB-231	ENST00000534382	REG1B	P48304	166 aa		11.61	□□□□□ -0.55
CTSB-231	ENST00000534382	ZNF137P	P52743	207 aa		11.61	□□□□□ -0.55
CTSB-231	ENST00000534382	BLCAP	P62952	87 aa		11.61	□□□□□ -0.55
CTSB-231	ENST00000534382	GNMT	Q14749	295 aa		11.61	□□□□□ -0.55
CTSB-231	ENST00000534382	MOGAT2	Q3SYC2	334 aa		11.61	□□□□□ -0.55
CTSB-231	ENST00000534382	TIMM50	Q3ZCQ8	353 aa		11.61	□□□□□ -0.55
CTSB-231	ENST00000534382	FBLN7	Q53RD9	439 aa		11.61	□□□□□ -0.55
CTSB-231	ENST00000534382	LY6G6F	Q5SQ64	297 aa		11.61	□□□□□ -0.55
CTSB-231	ENST00000534382	OR10R2	Q8NGX6	335 aa		11.61	□□□□□ -0.55
CTSB-231	ENST00000534382	YPEL2	Q96QA6	119 aa		11.61	□□□□□ -0.55
CTSB-231	ENST00000534382	SLC25A33	Q9BSK2	321 aa		11.61	□□□□□ -0.55
CTSB-231	ENST00000534382	CENPO	Q9BU64	300 aa		11.61	□□□□□ -0.55
CTSB-231	ENST00000534382	C12orf4	Q9NQ89	552 aa		11.61	□□□□□ -0.55
CTSB-231	ENST00000534382	DAPK2	Q9UIK4	370 aa		11.61	□□□□□ -0.55
CTSB-231	ENST00000534382	MGAT4A	Q9UM21	535 aa		11.61	□□□□□ -0.55
CTSB-231	ENST00000534382	KCNK7	Q9Y2U2	307 aa		11.61	□□□□□ -0.55
CTSB-231	ENST00000534382	TRIM64C	A6NLI5	447 aa		11.6	□□□□□ -0.55
CTSB-231	ENST00000534382	RAB27B	O00194	218 aa		11.6	□□□□□ -0.55
CTSB-231	ENST00000534382	CLEC2L	P0C7M8	214 aa		11.6	□□□□□ -0.55
CTSB-231	ENST00000534382	PPP1CC	P36873	323 aa	Known RBP	11.6	□□□□□ -0.55
CTSB-231	ENST00000534382	MXD1	Q05195	221 aa		11.6	□□□□□ -0.55
CTSB-231	ENST00000534382	HABP2	Q14520	560 aa	Predicted RBP	11.6	□□□□□ -0.55
CTSB-231	ENST00000534382	SFXN4	Q6P4A7	337 aa		11.6	□□□□□ -0.55
CTSB-231	ENST00000534382		Q6ZS46	218 aa		11.6	□□□□□ -0.55
CTSB-231	ENST00000534382	MOB3B	Q86TA1	216 aa		11.6	□□□□□ -0.55
CTSB-231	ENST00000534382	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	11.6	□□□□□ -0.55
CTSB-231	ENST00000534382	IL1F10	Q8WWZ1	152 aa		11.6	□□□□□ -0.55
CTSB-231	ENST00000534382	ATG5	Q9H1Y0	275 aa		11.6	□□□□□ -0.55
CTSB-231	ENST00000534382		Q9N2K0	584 aa		11.6	□□□□□ -0.55
CTSB-231	ENST00000534382	SERTAD4	Q9NUC0	356 aa		11.6	□□□□□ -0.55
CTSB-231	ENST00000534382		M0QZK8	103 aa		11.59	□□□□□ -0.55
CTSB-231	ENST00000534382	TXNL1	O43396	289 aa		11.59	□□□□□ -0.55
CTSB-231	ENST00000534382	LPL	P06858	475 aa		11.59	□□□□□ -0.55
CTSB-231	ENST00000534382	CD3G	P09693	182 aa		11.59	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms