RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	TEX15	Q9BXT5	2789 aa		3.35	□□□□□ -1.87
ATM-223	ENST00000533979	CLUH	O75153	1309 aa		3.35	□□□□□ -1.87
ATM-223	ENST00000533979	BAZ2B	Q9UIF8	2168 aa	Known RBP	3.35	□□□□□ -1.87
ATM-223	ENST00000533979	MYO15A	Q9UKN7	3530 aa		3.35	□□□□□ -1.87
ATM-223	ENST00000533979	VPS13A	Q96RL7	3174 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979		A0A0J9YXY3	114 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979		A0A1W2PRG6	482 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	CIB4	A0PJX0	185 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	DISC1	C4P0D8	188 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979		H0Y9J4	135 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979		J3QT63	122 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	PSMD12	O00232	456 aa	Predicted RBP	3.34	□□□□□ -1.87
ATM-223	ENST00000533979	PEX7	O00628	323 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	UBD	O15205	165 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	TGOLN2	O43493	480 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	FAM189A1	O60320	539 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	RAD1	O60671	282 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	GLS	O94925	669 aa	Predicted RBP	3.34	□□□□□ -1.87
ATM-223	ENST00000533979	ATP6V1G2	O95670	118 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	CD5	P06127	495 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	CDK1	P06493	297 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	FBP1	P09467	338 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	TDGF1	P13385	188 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	GTF2F2	P13984	249 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	KCNE1	P15382	129 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	RAB3A	P20336	220 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	FUT3	P21217	361 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	PAX6	P26367	422 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	KRTAP5-9	P26371	169 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	IDH3G	P51553	393 aa	Predicted RBP	3.34	□□□□□ -1.87
ATM-223	ENST00000533979	P2RX1	P51575	399 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	CAV2	P51636	162 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	TDGF1P3	P51864	188 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	DLX6	P56179	175 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	OR4D2	P58180	307 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	NAA20	P61599	178 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	FAM3A	P98173	230 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	MLLT11	Q13015	90 aa	Predicted RBP	3.34	□□□□□ -1.87
ATM-223	ENST00000533979	GSG1	Q2KHT4	349 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	CDNF	Q49AH0	187 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	ACSM3	Q53FZ2	586 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	KCTD16	Q68DU8	428 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	CASP12	Q6UXS9	341 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	GPR26	Q8NDV2	337 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	OR11H7	Q8NGC8	314 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	STOML3	Q8TAV4	291 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	FAM45A	Q8TCE6	357 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	EXOSC8	Q96B26	276 aa	Known RBP	3.34	□□□□□ -1.87
ATM-223	ENST00000533979	CREB3L1	Q96BA8	519 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	MRAP2	Q96G30	205 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	OR2V2	Q96R30	315 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	EDA2R	Q9HAV5	297 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	SPANXB1	Q9NS25	103 aa	Predicted RBP	3.34	□□□□□ -1.87
ATM-223	ENST00000533979	FGFR1OP2	Q9NVK5	253 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	CD84	Q9UIB8	345 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	RWDD2A	Q9UIY3	292 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	OR52A1	Q9UKL2	312 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	RAB26	Q9ULW5	256 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	TP53TG5	Q9Y2B4	290 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	ASTN1	O14525	1302 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	RALGAPA2	Q2PPJ7	1873 aa		3.34	□□□□□ -1.87
ATM-223	ENST00000533979	FBN3	Q75N90	2809 aa		3.34	□□□□□ -1.88
ATM-223	ENST00000533979	SPEG	Q15772	3267 aa		3.33	□□□□□ -1.88
ATM-223	ENST00000533979	TENM4	Q6N022	2769 aa		3.33	□□□□□ -1.88
ATM-223	ENST00000533979		A0A0J9YXV3	536 aa		3.33	□□□□□ -1.88
ATM-223	ENST00000533979	TSTD3	H0UI37	97 aa		3.33	□□□□□ -1.88
ATM-223	ENST00000533979	KLRC4	O43908	158 aa		3.33	□□□□□ -1.88
ATM-223	ENST00000533979	ZNF354A	O60765	605 aa	Predicted RBP	3.33	□□□□□ -1.88
ATM-223	ENST00000533979	MMP7	P09237	267 aa	Predicted RBP	3.33	□□□□□ -1.88
ATM-223	ENST00000533979	SMIM6	P0DI80	62 aa		3.33	□□□□□ -1.88
ATM-223	ENST00000533979	C8orf88	P0DMB2	117 aa		3.33	□□□□□ -1.88
ATM-223	ENST00000533979	FOLR2	P14207	255 aa		3.33	□□□□□ -1.88
ATM-223	ENST00000533979	ZNF30	P17039	623 aa		3.33	□□□□□ -1.88
ATM-223	ENST00000533979	OGN	P20774	298 aa	Known RBP	3.33	□□□□□ -1.88
ATM-223	ENST00000533979	CD70	P32970	193 aa		3.33	□□□□□ -1.88
ATM-223	ENST00000533979	SSTR5	P35346	364 aa		3.33	□□□□□ -1.88
ATM-223	ENST00000533979	DIO3	P55073	304 aa		3.33	□□□□□ -1.88
ATM-223	ENST00000533979	MTPN	P58546	118 aa		3.33	□□□□□ -1.88
ATM-223	ENST00000533979	SLC7A9	P82251	487 aa		3.33	□□□□□ -1.88
ATM-223	ENST00000533979	HPCA	P84074	193 aa		3.33	□□□□□ -1.88
ATM-223	ENST00000533979	BAMBI	Q13145	260 aa		3.33	□□□□□ -1.88
ATM-223	ENST00000533979	TBC1D28	Q2M2D7	210 aa		3.33	□□□□□ -1.88
ATM-223	ENST00000533979	CEACAM16	Q2WEN9	425 aa		3.33	□□□□□ -1.88
ATM-223	ENST00000533979	KRTAP21-3	Q3LHN1	58 aa		3.33	□□□□□ -1.88
ATM-223	ENST00000533979	TTLL9	Q3SXZ7	439 aa		3.33	□□□□□ -1.88
ATM-223	ENST00000533979	TMEM176B	Q3YBM2	270 aa	Predicted RBP	3.33	□□□□□ -1.88
ATM-223	ENST00000533979	FBXW12	Q6X9E4	464 aa		3.33	□□□□□ -1.88
ATM-223	ENST00000533979	STRADA	Q7RTN6	431 aa		3.33	□□□□□ -1.88
ATM-223	ENST00000533979	C10orf107	Q8IVU9	208 aa		3.33	□□□□□ -1.88
ATM-223	ENST00000533979	IFT20	Q8IY31	132 aa		3.33	□□□□□ -1.88
ATM-223	ENST00000533979	KLHL30-AS1	Q8NEE0	82 aa		3.33	□□□□□ -1.88
ATM-223	ENST00000533979	OR6N1	Q8NGY5	312 aa		3.33	□□□□□ -1.88
ATM-223	ENST00000533979	OR13G1	Q8NGZ3	307 aa		3.33	□□□□□ -1.88
ATM-223	ENST00000533979	SMIM19	Q96E16	107 aa		3.33	□□□□□ -1.88
ATM-223	ENST00000533979	C1orf147	Q96MC9	270 aa	Predicted RBP	3.33	□□□□□ -1.88
ATM-223	ENST00000533979	NRIP2	Q9BQI9	281 aa		3.33	□□□□□ -1.88
ATM-223	ENST00000533979	TCEAL7	Q9BRU2	100 aa		3.33	□□□□□ -1.88
ATM-223	ENST00000533979	VCX	Q9H320	206 aa		3.33	□□□□□ -1.88
ATM-223	ENST00000533979	TMEM138	Q9NPI0	162 aa		3.33	□□□□□ -1.88
ATM-223	ENST00000533979	TMEM100	Q9NV29	134 aa		3.33	□□□□□ -1.88

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms