RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 STEAP3Q658P3 488 aa12.21□□□□□ -0.45
CPSF1-211ENST00000533492 SIGIRRQ6IA17 410 aa12.21□□□□□ -0.45
CPSF1-211ENST00000533492 Q6ZPA2 131 aa12.21□□□□□ -0.45
CPSF1-211ENST00000533492 CEACAM19Q7Z692 300 aa12.21□□□□□ -0.45
CPSF1-211ENST00000533492 COMMD1Q8N668 190 aa12.21□□□□□ -0.45
CPSF1-211ENST00000533492 CT45A3Q8NHU0 189 aa12.21□□□□□ -0.45
CPSF1-211ENST00000533492 PHYHIPQ92561 330 aa12.21□□□□□ -0.45
CPSF1-211ENST00000533492 RASL11BQ9BPW5 248 aa12.21□□□□□ -0.45
CPSF1-211ENST00000533492 ZFP57Q9NU63 452 aa12.21□□□□□ -0.45
CPSF1-211ENST00000533492 LIN7CQ9NUP9 197 aaKnown RBP12.21□□□□□ -0.45
CPSF1-211ENST00000533492 NKX1-2Q9UD57 310 aaPredicted RBP12.21□□□□□ -0.45
CPSF1-211ENST00000533492 PRKDCP78527 4128 aaKnown RBP12.21□□□□□ -0.45
CPSF1-211ENST00000533492 NUDT19A8MXV4 375 aa12.2□□□□□ -0.46
CPSF1-211ENST00000533492 AP4M1O00189 453 aa12.2□□□□□ -0.46
CPSF1-211ENST00000533492 DUS4LO95620 317 aaKnown RBP12.2□□□□□ -0.46
CPSF1-211ENST00000533492 SRMP19623 302 aa12.2□□□□□ -0.46
CPSF1-211ENST00000533492 RPL23AP62750 156 aaKnown RBP12.2□□□□□ -0.46
CPSF1-211ENST00000533492 MORN2Q502X0 79 aa12.2□□□□□ -0.46
CPSF1-211ENST00000533492 OR10K2Q6IF99 312 aa12.2□□□□□ -0.46
CPSF1-211ENST00000533492 ZNF554Q86TJ5 538 aa12.2□□□□□ -0.46
CPSF1-211ENST00000533492 STPG2Q8N412 459 aa12.2□□□□□ -0.46
CPSF1-211ENST00000533492 Q8N6K4 173 aa12.2□□□□□ -0.46
CPSF1-211ENST00000533492 ZNF439Q8NDP4 499 aa12.2□□□□□ -0.46
CPSF1-211ENST00000533492 OR8H1Q8NGG4 311 aa12.2□□□□□ -0.46
CPSF1-211ENST00000533492 UFD1Q92890 307 aa12.2□□□□□ -0.46
CPSF1-211ENST00000533492 RCC1LQ96I51 464 aaKnown RBP12.2□□□□□ -0.46
CPSF1-211ENST00000533492 GON7Q9BXV9 100 aa12.2□□□□□ -0.46
CPSF1-211ENST00000533492 ABCG5Q9H222 651 aa12.2□□□□□ -0.46
CPSF1-211ENST00000533492 MBNL3Q9NUK0 354 aaKnown RBP12.2□□□□□ -0.46
CPSF1-211ENST00000533492 AURKAIP1Q9NWT8 199 aaPredicted RBP12.2□□□□□ -0.46
CPSF1-211ENST00000533492 TPRKBQ9Y3C4 175 aa12.2□□□□□ -0.46
CPSF1-211ENST00000533492 LRRC42Q9Y546 428 aa12.2□□□□□ -0.46
CPSF1-211ENST00000533492 LINC01548A6NM66 108 aa12.19□□□□□ -0.46
CPSF1-211ENST00000533492 ZNF736B4DX44 427 aaPredicted RBP12.19□□□□□ -0.46
CPSF1-211ENST00000533492 RGS11O94810 467 aa12.19□□□□□ -0.46
CPSF1-211ENST00000533492 VSIG8P0DPA2 414 aa12.19□□□□□ -0.46
CPSF1-211ENST00000533492 HTR2CP28335 458 aa12.19□□□□□ -0.46
CPSF1-211ENST00000533492 GPR12P47775 334 aa12.19□□□□□ -0.46
CPSF1-211ENST00000533492 ZNF137PP52743 207 aa12.19□□□□□ -0.46
CPSF1-211ENST00000533492 AQP4P55087 323 aa12.19□□□□□ -0.46
CPSF1-211ENST00000533492 GP2P55259 537 aaKnown RBP12.19□□□□□ -0.46
CPSF1-211ENST00000533492 C1orf100Q5SVJ3 147 aa12.19□□□□□ -0.46
CPSF1-211ENST00000533492 LRRTM1Q86UE6 522 aa12.19□□□□□ -0.46
CPSF1-211ENST00000533492 Q8N9W7 124 aa12.19□□□□□ -0.46
CPSF1-211ENST00000533492 OR52L2PQ8NGH6 319 aa12.19□□□□□ -0.46
CPSF1-211ENST00000533492 KCNG3Q8TAE7 436 aa12.19□□□□□ -0.46
CPSF1-211ENST00000533492 MRPL30Q8TCC3 161 aaKnown RBP12.19□□□□□ -0.46
CPSF1-211ENST00000533492 S1PR3Q99500 378 aa12.19□□□□□ -0.46
CPSF1-211ENST00000533492 TMEM59Q9BXS4 323 aa12.19□□□□□ -0.46
CPSF1-211ENST00000533492 JPT1Q9UK76 154 aa12.19□□□□□ -0.46
CPSF1-211ENST00000533492 LSM2Q9Y333 95 aaKnown RBP12.19□□□□□ -0.46
CPSF1-211ENST00000533492 LANCL1O43813 399 aa12.18□□□□□ -0.46
CPSF1-211ENST00000533492 HSMCR30P0CW71 290 aa12.18□□□□□ -0.46
CPSF1-211ENST00000533492 SLC6A1P30531 599 aa12.18□□□□□ -0.46
CPSF1-211ENST00000533492 PPP1CCP36873 323 aaKnown RBP12.18□□□□□ -0.46
CPSF1-211ENST00000533492 RPS27AP62979 156 aaKnown RBP12.18□□□□□ -0.46
CPSF1-211ENST00000533492 HTD2P86397 168 aa12.18□□□□□ -0.46
CPSF1-211ENST00000533492 PNLIPRP3Q17RR3 467 aa12.18□□□□□ -0.46
CPSF1-211ENST00000533492 LIPKQ5VXJ0 399 aa12.18□□□□□ -0.46
CPSF1-211ENST00000533492 TEX38Q6PEX7 206 aa12.18□□□□□ -0.46
CPSF1-211ENST00000533492 OR2W3Q7Z3T1 314 aa12.18□□□□□ -0.46
CPSF1-211ENST00000533492 KLHL30-AS1Q8NEE0 82 aa12.18□□□□□ -0.46
CPSF1-211ENST00000533492 TMEM203Q969S6 136 aa12.18□□□□□ -0.46
CPSF1-211ENST00000533492 GALMQ96C23 342 aa12.18□□□□□ -0.46
CPSF1-211ENST00000533492 SULT4A1Q9BR01 284 aa12.18□□□□□ -0.46
CPSF1-211ENST00000533492 FAAP24Q9BTP7 215 aa12.18□□□□□ -0.46
CPSF1-211ENST00000533492 ABHD14AQ9BUJ0 271 aa12.18□□□□□ -0.46
CPSF1-211ENST00000533492 CCDC90BQ9GZT6 254 aa12.18□□□□□ -0.46
CPSF1-211ENST00000533492 PLSCR3Q9NRY6 295 aa12.18□□□□□ -0.46
CPSF1-211ENST00000533492 ABRACLQ9P1F3 81 aa12.18□□□□□ -0.46
CPSF1-211ENST00000533492 RRP9O43818 475 aaKnown RBP12.17□□□□□ -0.46
CPSF1-211ENST00000533492 YPEL1O60688 119 aa12.17□□□□□ -0.46
CPSF1-211ENST00000533492 UCHL1P09936 223 aa12.17□□□□□ -0.46
CPSF1-211ENST00000533492 CHATP28329 748 aa12.17□□□□□ -0.46
CPSF1-211ENST00000533492 BLVRBP30043 206 aaPredicted RBP12.17□□□□□ -0.46
CPSF1-211ENST00000533492 SOX6P35712 828 aa12.17□□□□□ -0.46
CPSF1-211ENST00000533492 THBS3P49746 956 aa12.17□□□□□ -0.46
CPSF1-211ENST00000533492 GNMTQ14749 295 aa12.17□□□□□ -0.46
CPSF1-211ENST00000533492 C8orf86Q6ZUL3 223 aa12.17□□□□□ -0.46
CPSF1-211ENST00000533492 C6orf201Q7Z4U5 140 aa12.17□□□□□ -0.46
CPSF1-211ENST00000533492 C5orf24Q7Z6I8 188 aa12.17□□□□□ -0.46
CPSF1-211ENST00000533492 MRPL41Q8IXM3 137 aaKnown RBP12.17□□□□□ -0.46
CPSF1-211ENST00000533492 LINC00482Q8N8I6 264 aa12.17□□□□□ -0.46
CPSF1-211ENST00000533492 NRG4Q8WWG1 115 aa12.17□□□□□ -0.46
CPSF1-211ENST00000533492 DPF1Q92782 380 aa12.17□□□□□ -0.46
CPSF1-211ENST00000533492 CYYR1Q96J86 154 aa12.17□□□□□ -0.46
CPSF1-211ENST00000533492 YPEL2Q96QA6 119 aa12.17□□□□□ -0.46
CPSF1-211ENST00000533492 GPR61Q9BZJ8 451 aa12.17□□□□□ -0.46
CPSF1-211ENST00000533492 PLGRKTQ9HBL7 147 aa12.17□□□□□ -0.46
CPSF1-211ENST00000533492 CHMP1AQ9HD42 196 aaPredicted RBP12.17□□□□□ -0.46
CPSF1-211ENST00000533492 PLEKHJ1Q9NW61 149 aa12.17□□□□□ -0.46
CPSF1-211ENST00000533492 SLC22A1O15245 554 aa12.16□□□□□ -0.46
CPSF1-211ENST00000533492 RGS10O43665 173 aa12.16□□□□□ -0.46
CPSF1-211ENST00000533492 MYCNOSP40205 109 aa12.16□□□□□ -0.46
CPSF1-211ENST00000533492 F2RL1P55085 397 aa12.16□□□□□ -0.46
CPSF1-211ENST00000533492 LSAMPQ13449 338 aa12.16□□□□□ -0.46
CPSF1-211ENST00000533492 IRF3Q14653 427 aa12.16□□□□□ -0.46
CPSF1-211ENST00000533492 TRAM1Q15629 374 aa12.16□□□□□ -0.46
CPSF1-211ENST00000533492 CXorf66Q5JRM2 361 aaPredicted RBP12.16□□□□□ -0.46
CPSF1-211ENST00000533492 C18orf65Q6ZTR6 163 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms