RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 METTL8Q9H825 291 aaKnown RBP6.87□□□□□ -1.31
NEDD8-207ENST00000533242 TAS2R3Q9NYW6 316 aa6.87□□□□□ -1.31
NEDD8-207ENST00000533242 ANXA10Q9UJ72 324 aa6.87□□□□□ -1.31
NEDD8-207ENST00000533242 SESN1Q9Y6P5 492 aa6.87□□□□□ -1.31
NEDD8-207ENST00000533242 FSHBP01225 129 aa6.87□□□□□ -1.31
NEDD8-207ENST00000533242 LYL1P12980 280 aa6.87□□□□□ -1.31
NEDD8-207ENST00000533242 ADCYAP1P18509 176 aa6.87□□□□□ -1.31
NEDD8-207ENST00000533242 RCC1P18754 421 aaPredicted RBP6.87□□□□□ -1.31
NEDD8-207ENST00000533242 RBP2P50120 134 aa6.87□□□□□ -1.31
NEDD8-207ENST00000533242 SCRN3Q0VDG4 424 aa6.87□□□□□ -1.31
NEDD8-207ENST00000533242 STOML3Q8TAV4 291 aa6.87□□□□□ -1.31
NEDD8-207ENST00000533242 PIGCQ92535 297 aa6.87□□□□□ -1.31
NEDD8-207ENST00000533242 TOMM40LQ969M1 308 aa6.87□□□□□ -1.31
NEDD8-207ENST00000533242 SPSB1Q96BD6 273 aa6.87□□□□□ -1.31
NEDD8-207ENST00000533242 METTL9Q9H1A3 318 aa6.87□□□□□ -1.31
NEDD8-207ENST00000533242 PLA2G2EQ9NZK7 142 aa6.87□□□□□ -1.31
NEDD8-207ENST00000533242 FAM74A7A6NL05 159 aa6.86□□□□□ -1.31
NEDD8-207ENST00000533242 FGF16O43320 207 aa6.86□□□□□ -1.31
NEDD8-207ENST00000533242 HLA-HP01893 362 aa6.86□□□□□ -1.31
NEDD8-207ENST00000533242 APOC1P02654 83 aa6.86□□□□□ -1.31
NEDD8-207ENST00000533242 CSTBP04080 98 aaKnown RBP6.86□□□□□ -1.31
NEDD8-207ENST00000533242 OR5H8P0DN80 308 aa6.86□□□□□ -1.31
NEDD8-207ENST00000533242 ZNF14P17017 642 aaPredicted RBP6.86□□□□□ -1.31
NEDD8-207ENST00000533242 GATA3P23771 443 aa6.86□□□□□ -1.31
NEDD8-207ENST00000533242 S100A10P60903 97 aa6.86□□□□□ -1.31
NEDD8-207ENST00000533242 ZNF273Q14593 569 aa6.86□□□□□ -1.31
NEDD8-207ENST00000533242 OR8B8Q15620 311 aa6.86□□□□□ -1.31
NEDD8-207ENST00000533242 FAM74A3Q4VXF1 159 aa6.86□□□□□ -1.31
NEDD8-207ENST00000533242 PRSS54Q6PEW0 395 aa6.86□□□□□ -1.31
NEDD8-207ENST00000533242 ASCL4Q6XD76 172 aa6.86□□□□□ -1.31
NEDD8-207ENST00000533242 TMEM17Q86X19 198 aa6.86□□□□□ -1.31
NEDD8-207ENST00000533242 SLC30A7Q8NEW0 376 aa6.86□□□□□ -1.31
NEDD8-207ENST00000533242 PHYHIPLQ96FC7 376 aa6.86□□□□□ -1.31
NEDD8-207ENST00000533242 BORCS8Q96FH0 119 aa6.86□□□□□ -1.31
NEDD8-207ENST00000533242 C2orf50Q96LR7 162 aa6.86□□□□□ -1.31
NEDD8-207ENST00000533242 ADAT1Q9BUB4 502 aaKnown RBP6.86□□□□□ -1.31
NEDD8-207ENST00000533242 OR2S2Q9NQN1 319 aa6.86□□□□□ -1.31
NEDD8-207ENST00000533242 DECR2Q9NUI1 292 aa6.86□□□□□ -1.31
NEDD8-207ENST00000533242 IL36RNQ9UBH0 155 aa6.86□□□□□ -1.31
NEDD8-207ENST00000533242 TIMM10BQ9Y5J6 103 aa6.86□□□□□ -1.31
NEDD8-207ENST00000533242 MGAM2Q2M2H8 2515 aa6.86□□□□□ -1.31
NEDD8-207ENST00000533242 CA11O75493 328 aa6.85□□□□□ -1.31
NEDD8-207ENST00000533242 FXYD4P59646 89 aa6.85□□□□□ -1.31
NEDD8-207ENST00000533242 PDZK1IP1Q13113 114 aa6.85□□□□□ -1.31
NEDD8-207ENST00000533242 FAM189A2Q15884 450 aa6.85□□□□□ -1.31
NEDD8-207ENST00000533242 MIDNQ504T8 468 aa6.85□□□□□ -1.31
NEDD8-207ENST00000533242 PLCXD3Q63HM9 321 aa6.85□□□□□ -1.31
NEDD8-207ENST00000533242 LRP11Q86VZ4 500 aa6.85□□□□□ -1.31
NEDD8-207ENST00000533242 BAP18Q8IXM2 172 aa6.85□□□□□ -1.31
NEDD8-207ENST00000533242 OR4A4PQ8NGN8 299 aa6.85□□□□□ -1.31
NEDD8-207ENST00000533242 OR11L1Q8NGX0 322 aa6.85□□□□□ -1.31
NEDD8-207ENST00000533242 BSCL2Q96G97 398 aaPredicted RBP6.85□□□□□ -1.31
NEDD8-207ENST00000533242 CMSS1Q9BQ75 279 aaKnown RBP6.85□□□□□ -1.31
NEDD8-207ENST00000533242 SLC5A7Q9GZV3 580 aa6.85□□□□□ -1.31
NEDD8-207ENST00000533242 ST3GAL6Q9Y274 331 aa6.85□□□□□ -1.31
NEDD8-207ENST00000533242 TANC2Q9HCD6 1990 aa6.85□□□□□ -1.31
NEDD8-207ENST00000533242 CRYM-AS1A6NIL9 109 aa6.85□□□□□ -1.31
NEDD8-207ENST00000533242 ZNF850A8MQ14 1090 aa6.85□□□□□ -1.31
NEDD8-207ENST00000533242 DNASE2O00115 360 aaPredicted RBP6.85□□□□□ -1.31
NEDD8-207ENST00000533242 IGHV2-5P01817 119 aa6.85□□□□□ -1.31
NEDD8-207ENST00000533242 CD79AP11912 226 aa6.85□□□□□ -1.31
NEDD8-207ENST00000533242 CCNOP22674 350 aa6.85□□□□□ -1.31
NEDD8-207ENST00000533242 PIGPP57054 158 aa6.85□□□□□ -1.31
NEDD8-207ENST00000533242 CNN3Q15417 329 aaKnown RBP6.85□□□□□ -1.31
NEDD8-207ENST00000533242 IAH1Q2TAA2 248 aaPredicted RBP6.85□□□□□ -1.31
NEDD8-207ENST00000533242 PHLDA2Q53GA4 152 aa6.85□□□□□ -1.31
NEDD8-207ENST00000533242 GGNBP1Q5YKI7 109 aa6.85□□□□□ -1.31
NEDD8-207ENST00000533242 RPL7L1Q6DKI1 246 aaKnown RBP6.85□□□□□ -1.31
NEDD8-207ENST00000533242 OSR2Q8N2R0 312 aa6.85□□□□□ -1.31
NEDD8-207ENST00000533242 NARS2Q96I59 477 aaKnown RBP6.85□□□□□ -1.31
NEDD8-207ENST00000533242 AQP10Q96PS8 301 aa6.85□□□□□ -1.31
NEDD8-207ENST00000533242 GPHA2Q96T91 129 aa6.85□□□□□ -1.31
NEDD8-207ENST00000533242 DNTTIP1Q9H147 329 aa6.85□□□□□ -1.31
NEDD8-207ENST00000533242 TMEM231Q9H6L2 316 aa6.85□□□□□ -1.31
NEDD8-207ENST00000533242 UNKLQ9H9P5 680 aaKnown RBP6.85□□□□□ -1.31
NEDD8-207ENST00000533242 TMEM100Q9NV29 134 aa6.85□□□□□ -1.31
NEDD8-207ENST00000533242 HSF4Q9ULV5 492 aa6.85□□□□□ -1.31
NEDD8-207ENST00000533242 PPIAL4AQ9Y536 164 aa6.85□□□□□ -1.31
NEDD8-207ENST00000533242 GPR31O00270 319 aa6.84□□□□□ -1.31
NEDD8-207ENST00000533242 NGFP01138 241 aa6.84□□□□□ -1.31
NEDD8-207ENST00000533242 CTSDP07339 412 aaPredicted RBP6.84□□□□□ -1.31
NEDD8-207ENST00000533242 OR5AC1P0C628 307 aa6.84□□□□□ -1.31
NEDD8-207ENST00000533242 ATF4P18848 351 aaPredicted RBP6.84□□□□□ -1.31
NEDD8-207ENST00000533242 PRKACBP22694 351 aa6.84□□□□□ -1.31
NEDD8-207ENST00000533242 CYCSP99999 105 aaKnown RBP6.84□□□□□ -1.31
NEDD8-207ENST00000533242 DEFA5Q01523 94 aa6.84□□□□□ -1.31
NEDD8-207ENST00000533242 TAGLNQ01995 201 aaKnown RBP6.84□□□□□ -1.31
NEDD8-207ENST00000533242 SURF2Q15527 256 aaPredicted RBP6.84□□□□□ -1.31
NEDD8-207ENST00000533242 GUCA2BQ16661 112 aa6.84□□□□□ -1.31
NEDD8-207ENST00000533242 IGSF11Q5DX21 431 aa6.84□□□□□ -1.31
NEDD8-207ENST00000533242 AVPI1Q5T686 147 aa6.84□□□□□ -1.31
NEDD8-207ENST00000533242 RBMS3Q6XE24 437 aaKnown RBP6.84□□□□□ -1.31
NEDD8-207ENST00000533242 COLCA1Q6ZS62 124 aa6.84□□□□□ -1.31
NEDD8-207ENST00000533242 LHFPL2Q6ZUX7 228 aa6.84□□□□□ -1.31
NEDD8-207ENST00000533242 SLC25A26Q70HW3 274 aa6.84□□□□□ -1.31
NEDD8-207ENST00000533242 SPERTQ8NA61 448 aa6.84□□□□□ -1.31
NEDD8-207ENST00000533242 OR56B2PQ8NGI1 322 aa6.84□□□□□ -1.31
NEDD8-207ENST00000533242 LHFPL5Q8TAF8 219 aa6.84□□□□□ -1.31
NEDD8-207ENST00000533242 HPSE2Q8WWQ2 592 aa6.84□□□□□ -1.31
NEDD8-207ENST00000533242 C1QTNF5Q9BXJ0 243 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms