RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 SSX3Q99909 188 aa9.68□□□□□ -0.86
SSBP3-214ENST00000533209 ABCG5Q9H222 651 aa9.68□□□□□ -0.86
SSBP3-214ENST00000533209 DCSTAMPQ9H295 470 aa9.68□□□□□ -0.86
SSBP3-214ENST00000533209 GNG12Q9UBI6 72 aa9.68□□□□□ -0.86
SSBP3-214ENST00000533209 HILPDAQ9Y5L2 63 aa9.68□□□□□ -0.86
SSBP3-214ENST00000533209 LEUTXA8MZ59 168 aa9.67□□□□□ -0.86
SSBP3-214ENST00000533209 H3BUX3 64 aa9.67□□□□□ -0.86
SSBP3-214ENST00000533209 SLC31A2O15432 143 aa9.67□□□□□ -0.86
SSBP3-214ENST00000533209 FCGR3AP08637 254 aa9.67□□□□□ -0.86
SSBP3-214ENST00000533209 TMBIM6P55061 237 aa9.67□□□□□ -0.86
SSBP3-214ENST00000533209 HLA-DRB3P79483 266 aa9.67□□□□□ -0.86
SSBP3-214ENST00000533209 MRPS15P82914 257 aaKnown RBP9.67□□□□□ -0.86
SSBP3-214ENST00000533209 GNMTQ14749 295 aa9.67□□□□□ -0.86
SSBP3-214ENST00000533209 SPCS2Q15005 226 aa9.67□□□□□ -0.86
SSBP3-214ENST00000533209 ARL6IP1Q15041 203 aa9.67□□□□□ -0.86
SSBP3-214ENST00000533209 ZNF260Q3ZCT1 412 aa9.67□□□□□ -0.86
SSBP3-214ENST00000533209 PLA1AQ53H76 456 aa9.67□□□□□ -0.86
SSBP3-214ENST00000533209 TPTE2P1Q5T6R2 138 aa9.67□□□□□ -0.86
SSBP3-214ENST00000533209 OR5R1Q8NH85 324 aa9.67□□□□□ -0.86
SSBP3-214ENST00000533209 RAB2BQ8WUD1 216 aa9.67□□□□□ -0.86
SSBP3-214ENST00000533209 CREB3L1Q96BA8 519 aa9.67□□□□□ -0.86
SSBP3-214ENST00000533209 GALMQ96C23 342 aa9.67□□□□□ -0.86
SSBP3-214ENST00000533209 OR2S2Q9NQN1 319 aa9.67□□□□□ -0.86
SSBP3-214ENST00000533209 JPT1Q9UK76 154 aa9.67□□□□□ -0.86
SSBP3-214ENST00000533209 VPREB3Q9UKI3 123 aa9.67□□□□□ -0.86
SSBP3-214ENST00000533209 MGAT4AQ9UM21 535 aa9.67□□□□□ -0.86
SSBP3-214ENST00000533209 AMMECR1Q9Y4X0 333 aaPredicted RBP9.67□□□□□ -0.86
SSBP3-214ENST00000533209 DNHD1Q96M86 4753 aa9.67□□□□□ -0.86
SSBP3-214ENST00000533209 TRAV18A0A075B6X5 111 aa9.66□□□□□ -0.86
SSBP3-214ENST00000533209 A0A0A6YYH2 397 aa9.66□□□□□ -0.86
SSBP3-214ENST00000533209 BTBD17A6NE02 478 aa9.66□□□□□ -0.86
SSBP3-214ENST00000533209 FAM181BA6NEQ2 426 aa9.66□□□□□ -0.86
SSBP3-214ENST00000533209 TMEM235A6NFC5 223 aa9.66□□□□□ -0.86
SSBP3-214ENST00000533209 A6NJ64 397 aa9.66□□□□□ -0.86
SSBP3-214ENST00000533209 GPR137BO60478 399 aa9.66□□□□□ -0.86
SSBP3-214ENST00000533209 YPEL1O60688 119 aa9.66□□□□□ -0.86
SSBP3-214ENST00000533209 GSTP1P09211 210 aaKnown RBP9.66□□□□□ -0.86
SSBP3-214ENST00000533209 SCTP09683 121 aa9.66□□□□□ -0.86
SSBP3-214ENST00000533209 PPP1CCP36873 323 aaKnown RBP9.66□□□□□ -0.86
SSBP3-214ENST00000533209 CEACAM3P40198 252 aa9.66□□□□□ -0.86
SSBP3-214ENST00000533209 RAB13P51153 203 aa9.66□□□□□ -0.86
SSBP3-214ENST00000533209 RORCP51449 518 aa9.66□□□□□ -0.86
SSBP3-214ENST00000533209 DYNLT3P51808 116 aa9.66□□□□□ -0.86
SSBP3-214ENST00000533209 ZNF134P52741 427 aa9.66□□□□□ -0.86
SSBP3-214ENST00000533209 MADCAM1Q13477 382 aa9.66□□□□□ -0.86
SSBP3-214ENST00000533209 ARFRP1Q13795 201 aa9.66□□□□□ -0.86
SSBP3-214ENST00000533209 MORN2Q502X0 79 aa9.66□□□□□ -0.86
SSBP3-214ENST00000533209 CT45A1Q5HYN5 189 aa9.66□□□□□ -0.86
SSBP3-214ENST00000533209 UBE2NLQ5JXB2 153 aa9.66□□□□□ -0.86
SSBP3-214ENST00000533209 HACD4Q5VWC8 232 aa9.66□□□□□ -0.86
SSBP3-214ENST00000533209 SLC25A48Q6ZT89 311 aaKnown RBP9.66□□□□□ -0.86
SSBP3-214ENST00000533209 IZUMO1Q8IYV9 350 aa9.66□□□□□ -0.86
SSBP3-214ENST00000533209 SAMD12Q8N8I0 201 aa9.66□□□□□ -0.86
SSBP3-214ENST00000533209 CT45A3Q8NHU0 189 aa9.66□□□□□ -0.86
SSBP3-214ENST00000533209 YPEL2Q96QA6 119 aa9.66□□□□□ -0.86
SSBP3-214ENST00000533209 BCL7BQ9BQE9 202 aa9.66□□□□□ -0.86
SSBP3-214ENST00000533209 OCSTAMPQ9BR26 566 aa9.66□□□□□ -0.86
SSBP3-214ENST00000533209 STAB1Q9NY15 2570 aa9.66□□□□□ -0.86
SSBP3-214ENST00000533209 IGKV1-6A0A0C4DH72 117 aa9.65□□□□□ -0.86
SSBP3-214ENST00000533209 TMEM89A2RUT3 159 aa9.65□□□□□ -0.86
SSBP3-214ENST00000533209 OOSP1A8MZH6 123 aa9.65□□□□□ -0.86
SSBP3-214ENST00000533209 TRDCB7Z8K6 153 aa9.65□□□□□ -0.86
SSBP3-214ENST00000533209 SSX5O60225 188 aa9.65□□□□□ -0.86
SSBP3-214ENST00000533209 ACTG1P63261 375 aa9.65□□□□□ -0.86
SSBP3-214ENST00000533209 DIAPH2-AS1Q14236 149 aa9.65□□□□□ -0.86
SSBP3-214ENST00000533209 LY6EQ16553 131 aa9.65□□□□□ -0.86
SSBP3-214ENST00000533209 LY6G6FQ5SQ64 297 aa9.65□□□□□ -0.86
SSBP3-214ENST00000533209 STEAP3Q658P3 488 aa9.65□□□□□ -0.86
SSBP3-214ENST00000533209 OR10X1Q8NGY0 326 aa9.65□□□□□ -0.86
SSBP3-214ENST00000533209 NUDCD2Q8WVJ2 157 aa9.65□□□□□ -0.86
SSBP3-214ENST00000533209 IL1F10Q8WWZ1 152 aa9.65□□□□□ -0.86
SSBP3-214ENST00000533209 ACOT12Q8WYK0 555 aa9.65□□□□□ -0.86
SSBP3-214ENST00000533209 MAFIPQ8WZ33 124 aa9.65□□□□□ -0.86
SSBP3-214ENST00000533209 TAF15Q92804 592 aaKnown RBP eCLIP9.65□□□□□ -0.862e-6■■■■□ 24
SSBP3-214ENST00000533209 ST6GALNAC6Q969X2 333 aa9.65□□□□□ -0.86
SSBP3-214ENST00000533209 RPEQ96AT9 228 aa9.65□□□□□ -0.86
SSBP3-214ENST00000533209 PHF21AQ96BD5 680 aa9.65□□□□□ -0.86
SSBP3-214ENST00000533209 AUNIPQ9H7T9 357 aa9.65□□□□□ -0.86
SSBP3-214ENST00000533209 DIABLOQ9NR28 239 aa9.65□□□□□ -0.86
SSBP3-214ENST00000533209 COMMD3Q9UBI1 195 aa9.65□□□□□ -0.86
SSBP3-214ENST00000533209 ZNF230Q9UIE0 474 aaPredicted RBP9.65□□□□□ -0.86
SSBP3-214ENST00000533209 CEPT1Q9Y6K0 416 aa9.65□□□□□ -0.86
SSBP3-214ENST00000533209 A0A1W2PPI3 338 aa9.64□□□□□ -0.87
SSBP3-214ENST00000533209 A6NDX4 124 aa9.64□□□□□ -0.87
SSBP3-214ENST00000533209 H3BMQ9 156 aa9.64□□□□□ -0.87
SSBP3-214ENST00000533209 FABP7O15540 132 aa9.64□□□□□ -0.87
SSBP3-214ENST00000533209 EIF4EP06730 217 aaKnown RBP9.64□□□□□ -0.87
SSBP3-214ENST00000533209 HKR1P10072 659 aa9.64□□□□□ -0.87
SSBP3-214ENST00000533209 ZNF182P17025 639 aaPredicted RBP9.64□□□□□ -0.87
SSBP3-214ENST00000533209 DTYMKP23919 212 aa9.64□□□□□ -0.87
SSBP3-214ENST00000533209 TALDO1P37837 337 aa9.64□□□□□ -0.87
SSBP3-214ENST00000533209 ZNF137PP52743 207 aa9.64□□□□□ -0.87
SSBP3-214ENST00000533209 RPL15P61313 204 aaKnown RBP9.64□□□□□ -0.87
SSBP3-214ENST00000533209 HERPUD1Q15011 391 aa9.64□□□□□ -0.87
SSBP3-214ENST00000533209 SRSF7Q16629 238 aaKnown RBP eCLIP9.64□□□□□ -0.87
SSBP3-214ENST00000533209 PNLIPRP3Q17RR3 467 aa9.64□□□□□ -0.87
SSBP3-214ENST00000533209 CCBE1Q6UXH8 406 aaPredicted RBP9.64□□□□□ -0.87
SSBP3-214ENST00000533209 Q6ZS49 121 aa9.64□□□□□ -0.87
SSBP3-214ENST00000533209 DTX3Q8N9I9 347 aa9.64□□□□□ -0.87
SSBP3-214ENST00000533209 OR4A4PQ8NGN8 299 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms