RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 COMMD3Q9UBI1 195 aa20.07■□□□□ 0.8
USP48-214ENST00000532737 GNG12Q9UBI6 72 aa20.07■□□□□ 0.8
USP48-214ENST00000532737 HILPDAQ9Y5L2 63 aa20.07■□□□□ 0.8
USP48-214ENST00000532737 BUB1B-PAK6H3BSN5 160 aa20.06■□□□□ 0.8
USP48-214ENST00000532737 FCGR3AP08637 254 aa20.06■□□□□ 0.8
USP48-214ENST00000532737 GSTP1P09211 210 aaKnown RBP20.06■□□□□ 0.8
USP48-214ENST00000532737 ZNF182P17025 639 aaPredicted RBP20.06■□□□□ 0.8
USP48-214ENST00000532737 HTD2P86397 168 aa20.06■□□□□ 0.8
USP48-214ENST00000532737 GNMTQ14749 295 aa20.06■□□□□ 0.8
USP48-214ENST00000532737 UBE2NLQ5JXB2 153 aa20.06■□□□□ 0.8
USP48-214ENST00000532737 HACD4Q5VWC8 232 aa20.06■□□□□ 0.8
USP48-214ENST00000532737 IZUMO1Q8IYV9 350 aa20.06■□□□□ 0.8
USP48-214ENST00000532737 TMEM86BQ8N661 226 aa20.06■□□□□ 0.8
USP48-214ENST00000532737 ACOT12Q8WYK0 555 aa20.06■□□□□ 0.8
USP48-214ENST00000532737 GALMQ96C23 342 aa20.06■□□□□ 0.8
USP48-214ENST00000532737 OR2S2Q9NQN1 319 aa20.06■□□□□ 0.8
USP48-214ENST00000532737 A0A0A6YYH2 397 aa20.05■□□□□ 0.8
USP48-214ENST00000532737 TMEM235A6NFC5 223 aa20.05■□□□□ 0.8
USP48-214ENST00000532737 A6NJ64 397 aa20.05■□□□□ 0.8
USP48-214ENST00000532737 H3BMQ9 156 aa20.05■□□□□ 0.8
USP48-214ENST00000532737 LY6LH3BQJ8 138 aa20.05■□□□□ 0.8
USP48-214ENST00000532737 SCTP09683 121 aa20.05■□□□□ 0.8
USP48-214ENST00000532737 HLA-DRB3P79483 266 aa20.05■□□□□ 0.8
USP48-214ENST00000532737 PLA1AQ53H76 456 aa20.05■□□□□ 0.8
USP48-214ENST00000532737 DTX3Q8N9I9 347 aa20.05■□□□□ 0.8
USP48-214ENST00000532737 SSX3Q99909 188 aa20.05■□□□□ 0.8
USP48-214ENST00000532737 CHIAQ9BZP6 476 aa20.05■□□□□ 0.8
USP48-214ENST00000532737 DIABLOQ9NR28 239 aa20.05■□□□□ 0.8
USP48-214ENST00000532737 ZNF230Q9UIE0 474 aaPredicted RBP20.05■□□□□ 0.8
USP48-214ENST00000532737 MGAT4AQ9UM21 535 aa20.05■□□□□ 0.8
USP48-214ENST00000532737 POMT1Q9Y6A1 747 aa20.05■□□□□ 0.8
USP48-214ENST00000532737 LEUTXA8MZ59 168 aa20.04■□□□□ 0.8
USP48-214ENST00000532737 SLC31A2O15432 143 aa20.04■□□□□ 0.8
USP48-214ENST00000532737 NOL3O60936 208 aaKnown RBP20.04■□□□□ 0.8
USP48-214ENST00000532737 RNASE1P07998 156 aaKnown RBP20.04■□□□□ 0.8
USP48-214ENST00000532737 TALDO1P37837 337 aa20.04■□□□□ 0.8
USP48-214ENST00000532737 C8orf31Q8N9H6 132 aa20.04■□□□□ 0.8
USP48-214ENST00000532737 ZNF439Q8NDP4 499 aa20.04■□□□□ 0.8
USP48-214ENST00000532737 ZFAND2BQ8WV99 257 aa20.04■□□□□ 0.8
USP48-214ENST00000532737 NUDCD2Q8WVJ2 157 aa20.04■□□□□ 0.8
USP48-214ENST00000532737 IL1F10Q8WWZ1 152 aa20.04■□□□□ 0.8
USP48-214ENST00000532737 S100A16Q96FQ6 103 aaKnown RBP20.04■□□□□ 0.8
USP48-214ENST00000532737 DPAGT1Q9H3H5 408 aa20.04■□□□□ 0.8
USP48-214ENST00000532737 JPT1Q9UK76 154 aa20.04■□□□□ 0.8
USP48-214ENST00000532737 ANK2Q01484 3957 aa20.03■□□□□ 0.8
USP48-214ENST00000532737 TRDCB7Z8K6 153 aa20.03■□□□□ 0.8
USP48-214ENST00000532737 SSX5O60225 188 aa20.03■□□□□ 0.8
USP48-214ENST00000532737 EIF4EP06730 217 aaKnown RBP20.03■□□□□ 0.8
USP48-214ENST00000532737 PPP1CCP36873 323 aaKnown RBP20.03■□□□□ 0.8
USP48-214ENST00000532737 ZNF134P52741 427 aa20.03■□□□□ 0.8
USP48-214ENST00000532737 AANATQ16613 207 aa20.03■□□□□ 0.8
USP48-214ENST00000532737 PNLIPRP3Q17RR3 467 aa20.03■□□□□ 0.8
USP48-214ENST00000532737 LRRC75BQ2VPJ9 315 aa20.03■□□□□ 0.8
USP48-214ENST00000532737 Q3ZCU0 254 aa20.03■□□□□ 0.8
USP48-214ENST00000532737 MORN2Q502X0 79 aa20.03■□□□□ 0.8
USP48-214ENST00000532737 CT45A1Q5HYN5 189 aa20.03■□□□□ 0.8
USP48-214ENST00000532737 TPTE2P1Q5T6R2 138 aa20.03■□□□□ 0.8
USP48-214ENST00000532737 LINC00311Q8N616 119 aa20.03■□□□□ 0.8
USP48-214ENST00000532737 CT45A3Q8NHU0 189 aa20.03■□□□□ 0.8
USP48-214ENST00000532737 PIFOQ8TCI5 191 aa20.03■□□□□ 0.8
USP48-214ENST00000532737 FAM216AQ8WUB2 273 aa20.03■□□□□ 0.8
USP48-214ENST00000532737 MAFIPQ8WZ33 124 aa20.03■□□□□ 0.8
USP48-214ENST00000532737 CREB3L1Q96BA8 519 aa20.03■□□□□ 0.8
USP48-214ENST00000532737 AUNIPQ9H7T9 357 aa20.03■□□□□ 0.8
USP48-214ENST00000532737 VGLL3A8MV65 326 aa20.02■□□□□ 0.8
USP48-214ENST00000532737 H3BUX3 64 aa20.02■□□□□ 0.8
USP48-214ENST00000532737 XRCC3O43542 346 aa20.02■□□□□ 0.8
USP48-214ENST00000532737 HPGDSO60760 199 aa20.02■□□□□ 0.8
USP48-214ENST00000532737 RAB13P51153 203 aa20.02■□□□□ 0.8
USP48-214ENST00000532737 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP20.02■□□□□ 0.8
USP48-214ENST00000532737 DYNC2LI1Q8TCX1 351 aa20.02■□□□□ 0.8
USP48-214ENST00000532737 AP3S1Q92572 193 aa20.02■□□□□ 0.8
USP48-214ENST00000532737 OCSTAMPQ9BR26 566 aa20.02■□□□□ 0.8
USP48-214ENST00000532737 AMMECR1Q9Y4X0 333 aaPredicted RBP20.02■□□□□ 0.8
USP48-214ENST00000532737 IGKV1-6A0A0C4DH72 117 aa20.01■□□□□ 0.79
USP48-214ENST00000532737 YPEL1O60688 119 aa20.01■□□□□ 0.79
USP48-214ENST00000532737 APOA1P02647 267 aa20.01■□□□□ 0.79
USP48-214ENST00000532737 DTYMKP23919 212 aa20.01■□□□□ 0.79
USP48-214ENST00000532737 CEACAM3P40198 252 aa20.01■□□□□ 0.79
USP48-214ENST00000532737 GNG2P59768 71 aa20.01■□□□□ 0.79
USP48-214ENST00000532737 DIAPH2-AS1Q14236 149 aa20.01■□□□□ 0.79
USP48-214ENST00000532737 STEAP3Q658P3 488 aa20.01■□□□□ 0.79
USP48-214ENST00000532737 C16orf87Q6PH81 154 aa20.01■□□□□ 0.79
USP48-214ENST00000532737 SLC25A48Q6ZT89 311 aaKnown RBP20.01■□□□□ 0.79
USP48-214ENST00000532737 OR10X1Q8NGY0 326 aa20.01■□□□□ 0.79
USP48-214ENST00000532737 CMTM3Q96MX0 182 aa20.01■□□□□ 0.79
USP48-214ENST00000532737 YPEL2Q96QA6 119 aa20.01■□□□□ 0.79
USP48-214ENST00000532737 RBM38Q9H0Z9 239 aaKnown RBP20.01■□□□□ 0.79
USP48-214ENST00000532737 IGKV1D-8A0A087WSZ0 117 aa20■□□□□ 0.79
USP48-214ENST00000532737 FABP7O15540 132 aa20■□□□□ 0.79
USP48-214ENST00000532737 GSTT2P0CG29 244 aa20■□□□□ 0.79
USP48-214ENST00000532737 GSTT2BP0CG30 244 aa20■□□□□ 0.79
USP48-214ENST00000532737 PTHLHP12272 177 aa20■□□□□ 0.79
USP48-214ENST00000532737 ELK1P19419 428 aa20■□□□□ 0.79
USP48-214ENST00000532737 SOX6P35712 828 aa20■□□□□ 0.79
USP48-214ENST00000532737 PITPNAQ00169 270 aa20■□□□□ 0.79
USP48-214ENST00000532737 MADCAM1Q13477 382 aa20■□□□□ 0.79
USP48-214ENST00000532737 MZT2AQ6P582 158 aa20■□□□□ 0.79
USP48-214ENST00000532737 OR5R1Q8NH85 324 aa20■□□□□ 0.79
USP48-214ENST00000532737 C19orf24Q9BVV8 132 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms