RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 OR2T10Q8NGZ9 312 aa13.7□□□□□ -0.22
PHRF1-204ENST00000532550 FAAP24Q9BTP7 215 aa13.7□□□□□ -0.22
PHRF1-204ENST00000532550 PLGRKTQ9HBL7 147 aa13.7□□□□□ -0.22
PHRF1-204ENST00000532550 OR2S2Q9NQN1 319 aa13.7□□□□□ -0.22
PHRF1-204ENST00000532550 MBNL3Q9NUK0 354 aaKnown RBP13.7□□□□□ -0.22
PHRF1-204ENST00000532550 BLOC1S6Q9UL45 172 aa13.7□□□□□ -0.22
PHRF1-204ENST00000532550 LRRC42Q9Y546 428 aa13.7□□□□□ -0.22
PHRF1-204ENST00000532550 IGHV3-72A0A0B4J1Y9 119 aa13.69□□□□□ -0.22
PHRF1-204ENST00000532550 A0A1W2PRX2 142 aa13.69□□□□□ -0.22
PHRF1-204ENST00000532550 NCBP2LA6PVI3 153 aaKnown RBP13.69□□□□□ -0.22
PHRF1-204ENST00000532550 SLC31A2O15432 143 aa13.69□□□□□ -0.22
PHRF1-204ENST00000532550 FGF16O43320 207 aa13.69□□□□□ -0.22
PHRF1-204ENST00000532550 BPNT1O95861 308 aa13.69□□□□□ -0.22
PHRF1-204ENST00000532550 CHATP28329 748 aa13.69□□□□□ -0.22
PHRF1-204ENST00000532550 ZNF134P52741 427 aa13.69□□□□□ -0.22
PHRF1-204ENST00000532550 EBI3Q14213 229 aa13.69□□□□□ -0.22
PHRF1-204ENST00000532550 CT45A1Q5HYN5 189 aa13.69□□□□□ -0.22
PHRF1-204ENST00000532550 CT45A3Q8NHU0 189 aa13.69□□□□□ -0.22
PHRF1-204ENST00000532550 MRPL30Q8TCC3 161 aaKnown RBP13.69□□□□□ -0.22
PHRF1-204ENST00000532550 RTN4IP1Q8WWV3 396 aaPredicted RBP13.69□□□□□ -0.22
PHRF1-204ENST00000532550 ST6GALNAC6Q969X2 333 aa13.69□□□□□ -0.22
PHRF1-204ENST00000532550 EAF1Q96JC9 268 aaPredicted RBP13.69□□□□□ -0.22
PHRF1-204ENST00000532550 SULT4A1Q9BR01 284 aa13.69□□□□□ -0.22
PHRF1-204ENST00000532550 TM2D1Q9BX74 207 aa13.69□□□□□ -0.22
PHRF1-204ENST00000532550 PLEKHJ1Q9NW61 149 aa13.69□□□□□ -0.22
PHRF1-204ENST00000532550 RAB26Q9ULW5 256 aa13.69□□□□□ -0.22
PHRF1-204ENST00000532550 AK6Q9Y3D8 172 aaKnown RBP13.69□□□□□ -0.22
PHRF1-204ENST00000532550 ADARB2-AS1A8MUL3 147 aa13.68□□□□□ -0.22
PHRF1-204ENST00000532550 TMEM14DPA8MWL7 114 aa13.68□□□□□ -0.22
PHRF1-204ENST00000532550 TXNL1O43396 289 aa13.68□□□□□ -0.22
PHRF1-204ENST00000532550 ARSBP15848 533 aa13.68□□□□□ -0.22
PHRF1-204ENST00000532550 CD1BP29016 333 aa13.68□□□□□ -0.22
PHRF1-204ENST00000532550 BLVRBP30043 206 aaPredicted RBP13.68□□□□□ -0.22
PHRF1-204ENST00000532550 UNC119Q13432 240 aa13.68□□□□□ -0.22
PHRF1-204ENST00000532550 MORN2Q502X0 79 aa13.68□□□□□ -0.22
PHRF1-204ENST00000532550 C6orf201Q7Z4U5 140 aa13.68□□□□□ -0.22
PHRF1-204ENST00000532550 TGIF2LXQ8IUE1 241 aa13.68□□□□□ -0.22
PHRF1-204ENST00000532550 C5orf56Q8N8D9 126 aa13.68□□□□□ -0.22
PHRF1-204ENST00000532550 ZNF439Q8NDP4 499 aa13.68□□□□□ -0.22
PHRF1-204ENST00000532550 OR52L2PQ8NGH6 319 aa13.68□□□□□ -0.22
PHRF1-204ENST00000532550 URM1Q9BTM9 101 aaKnown RBP13.68□□□□□ -0.22
PHRF1-204ENST00000532550 ACOT13Q9NPJ3 140 aa13.68□□□□□ -0.22
PHRF1-204ENST00000532550 TSSC4Q9Y5U2 329 aaPredicted RBP13.68□□□□□ -0.22
PHRF1-204ENST00000532550 PSMB11A5LHX3 300 aa13.67□□□□□ -0.22
PHRF1-204ENST00000532550 G3V4G9 280 aa13.67□□□□□ -0.22
PHRF1-204ENST00000532550 SLC17A2O00624 439 aa13.67□□□□□ -0.22
PHRF1-204ENST00000532550 RGS11O94810 467 aa13.67□□□□□ -0.22
PHRF1-204ENST00000532550 CALRP27797 417 aaKnown RBP13.67□□□□□ -0.22
PHRF1-204ENST00000532550 RANBP1P43487 201 aa13.67□□□□□ -0.22
PHRF1-204ENST00000532550 QRFPP83859 136 aa13.67□□□□□ -0.22
PHRF1-204ENST00000532550 HTD2P86397 168 aa13.67□□□□□ -0.22
PHRF1-204ENST00000532550 P2RY14Q15391 338 aa13.67□□□□□ -0.22
PHRF1-204ENST00000532550 IZUMO1Q8IYV9 350 aa13.67□□□□□ -0.22
PHRF1-204ENST00000532550 GALMQ96C23 342 aa13.67□□□□□ -0.22
PHRF1-204ENST00000532550 CYYR1Q96J86 154 aa13.67□□□□□ -0.22
PHRF1-204ENST00000532550 NICN1Q9BSH3 213 aa13.67□□□□□ -0.22
PHRF1-204ENST00000532550 KCNK15Q9H427 330 aa13.67□□□□□ -0.22
PHRF1-204ENST00000532550 CHMP1AQ9HD42 196 aaPredicted RBP13.67□□□□□ -0.22
PHRF1-204ENST00000532550 ABRACLQ9P1F3 81 aa13.67□□□□□ -0.22
PHRF1-204ENST00000532550 JPT1Q9UK76 154 aa13.67□□□□□ -0.22
PHRF1-204ENST00000532550 SERPINE3A8MV23 424 aa13.66□□□□□ -0.22
PHRF1-204ENST00000532550 MOSP00540 346 aa13.66□□□□□ -0.22
PHRF1-204ENST00000532550 PF4V1P10720 104 aa13.66□□□□□ -0.22
PHRF1-204ENST00000532550 PSMD7P51665 324 aa13.66□□□□□ -0.22
PHRF1-204ENST00000532550 ZNF137PP52743 207 aa13.66□□□□□ -0.22
PHRF1-204ENST00000532550 FABP5Q01469 135 aa13.66□□□□□ -0.22
PHRF1-204ENST00000532550 RAB11BQ15907 218 aa13.66□□□□□ -0.22
PHRF1-204ENST00000532550 TCTEX1D4Q5JR98 221 aa13.66□□□□□ -0.22
PHRF1-204ENST00000532550 OR2W3Q7Z3T1 314 aa13.66□□□□□ -0.22
PHRF1-204ENST00000532550 C5orf24Q7Z6I8 188 aa13.66□□□□□ -0.22
PHRF1-204ENST00000532550 CHPT1Q8WUD6 406 aa13.66□□□□□ -0.22
PHRF1-204ENST00000532550 GFI1Q99684 422 aa13.66□□□□□ -0.22
PHRF1-204ENST00000532550 YPEL1O60688 119 aa13.65□□□□□ -0.22
PHRF1-204ENST00000532550 ATP6V1G2O95670 118 aa13.65□□□□□ -0.22
PHRF1-204ENST00000532550 PPP1CCP36873 323 aaKnown RBP13.65□□□□□ -0.22
PHRF1-204ENST00000532550 TBCEQ15813 527 aaPredicted RBP13.65□□□□□ -0.22
PHRF1-204ENST00000532550 KHDC1LQ5JSQ8 128 aa13.65□□□□□ -0.22
PHRF1-204ENST00000532550 C10orf99Q6UWK7 81 aa13.65□□□□□ -0.22
PHRF1-204ENST00000532550 ZNF367Q7RTV3 350 aa13.65□□□□□ -0.22
PHRF1-204ENST00000532550 SLC35E3Q7Z769 313 aa13.65□□□□□ -0.22
PHRF1-204ENST00000532550 FOXRED2Q8IWF2 684 aa13.65□□□□□ -0.22
PHRF1-204ENST00000532550 SETD6Q8TBK2 473 aa13.65□□□□□ -0.22
PHRF1-204ENST00000532550 YPEL2Q96QA6 119 aa13.65□□□□□ -0.22
PHRF1-204ENST00000532550 ABHD14AQ9BUJ0 271 aa13.65□□□□□ -0.22
PHRF1-204ENST00000532550 LPAR5Q9H1C0 372 aa13.65□□□□□ -0.22
PHRF1-204ENST00000532550 RIMS4Q9H426 269 aaPredicted RBP13.65□□□□□ -0.22
PHRF1-204ENST00000532550 V9GY05 133 aa13.65□□□□□ -0.22
PHRF1-204ENST00000532550 ZNF736B4DX44 427 aaPredicted RBP13.64□□□□□ -0.23
PHRF1-204ENST00000532550 SOCS1O15524 211 aa13.64□□□□□ -0.23
PHRF1-204ENST00000532550 LANCL1O43813 399 aa13.64□□□□□ -0.23
PHRF1-204ENST00000532550 IGHG2P01859 326 aa13.64□□□□□ -0.23
PHRF1-204ENST00000532550 SLC35B1P78383 322 aa13.64□□□□□ -0.23
PHRF1-204ENST00000532550 GNMTQ14749 295 aa13.64□□□□□ -0.23
PHRF1-204ENST00000532550 HMGN3Q15651 99 aa13.64□□□□□ -0.23
PHRF1-204ENST00000532550 C2orf76Q3KRA6 126 aa13.64□□□□□ -0.23
PHRF1-204ENST00000532550 LY6G6FQ5SQ64 297 aa13.64□□□□□ -0.23
PHRF1-204ENST00000532550 SAMD5Q5TGI4 173 aa13.64□□□□□ -0.23
PHRF1-204ENST00000532550 ZNF329Q86UD4 541 aa13.64□□□□□ -0.23
PHRF1-204ENST00000532550 FAM89BQ8N5H3 189 aa13.64□□□□□ -0.23
PHRF1-204ENST00000532550 Q8N6K4 173 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms