RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 IL3RAP26951 378 aa18.35■□□□□ 0.53
CAPN1-222ENST00000532285 VDAC2P45880 294 aaPredicted RBP18.35■□□□□ 0.53
CAPN1-222ENST00000532285 C2orf68Q2NKX9 166 aa18.35■□□□□ 0.53
CAPN1-222ENST00000532285 FBLN7Q53RD9 439 aa18.35■□□□□ 0.53
CAPN1-222ENST00000532285 FAM53AQ6NSI3 398 aaPredicted RBP18.35■□□□□ 0.53
CAPN1-222ENST00000532285 SLC25A48Q6ZT89 311 aaKnown RBP18.35■□□□□ 0.53
CAPN1-222ENST00000532285 ZNF439Q8NDP4 499 aa18.35■□□□□ 0.53
CAPN1-222ENST00000532285 WNK1Q9H4A3 2382 aa18.35■□□□□ 0.53
CAPN1-222ENST00000532285 PSMB9P28065 219 aa18.34■□□□□ 0.53
CAPN1-222ENST00000532285 CLDN12P56749 244 aa18.34■□□□□ 0.53
CAPN1-222ENST00000532285 C2orf76Q3KRA6 126 aa18.34■□□□□ 0.53
CAPN1-222ENST00000532285 STEAP3Q658P3 488 aa18.34■□□□□ 0.53
CAPN1-222ENST00000532285 OR10V1Q8NGI7 309 aa18.34■□□□□ 0.53
CAPN1-222ENST00000532285 MMP27Q9H306 513 aa18.34■□□□□ 0.53
CAPN1-222ENST00000532285 OR2S2Q9NQN1 319 aa18.34■□□□□ 0.53
CAPN1-222ENST00000532285 STEAP1Q9UHE8 339 aa18.34■□□□□ 0.53
CAPN1-222ENST00000532285 IGHV1-3A0A0C4DH29 117 aa18.33■□□□□ 0.52
CAPN1-222ENST00000532285 SOCS1O15524 211 aa18.33■□□□□ 0.52
CAPN1-222ENST00000532285 NAPSAO96009 420 aa18.33■□□□□ 0.52
CAPN1-222ENST00000532285 ZNF134P52741 427 aa18.33■□□□□ 0.52
CAPN1-222ENST00000532285 HTD2P86397 168 aa18.33■□□□□ 0.52
CAPN1-222ENST00000532285 HES1Q14469 280 aa18.33■□□□□ 0.52
CAPN1-222ENST00000532285 ABCA11PQ4W5N1 156 aa18.33■□□□□ 0.52
CAPN1-222ENST00000532285 CT45A1Q5HYN5 189 aa18.33■□□□□ 0.52
CAPN1-222ENST00000532285 HES5Q5TA89 166 aa18.33■□□□□ 0.52
CAPN1-222ENST00000532285 ZNF773Q6PK81 442 aa18.33■□□□□ 0.52
CAPN1-222ENST00000532285 MOB3BQ86TA1 216 aa18.33■□□□□ 0.52
CAPN1-222ENST00000532285 CT45A3Q8NHU0 189 aa18.33■□□□□ 0.52
CAPN1-222ENST00000532285 ST6GALNAC6Q969X2 333 aa18.33■□□□□ 0.52
CAPN1-222ENST00000532285 WNT10AQ9GZT5 417 aa18.33■□□□□ 0.52
CAPN1-222ENST00000532285 RIMS4Q9H426 269 aaPredicted RBP18.33■□□□□ 0.52
CAPN1-222ENST00000532285 HSF4Q9ULV5 492 aa18.33■□□□□ 0.52
CAPN1-222ENST00000532285 MOB4Q9Y3A3 225 aa18.33■□□□□ 0.52
CAPN1-222ENST00000532285 SLC31A2O15432 143 aa18.32■□□□□ 0.52
CAPN1-222ENST00000532285 AMY1AP04745 511 aa18.32■□□□□ 0.52
CAPN1-222ENST00000532285 AMY2AP04746 511 aa18.32■□□□□ 0.52
CAPN1-222ENST00000532285 LPLP06858 475 aa18.32■□□□□ 0.52
CAPN1-222ENST00000532285 TMEM11P17152 192 aa18.32■□□□□ 0.52
CAPN1-222ENST00000532285 REG1BP48304 166 aa18.32■□□□□ 0.52
CAPN1-222ENST00000532285 MORN2Q502X0 79 aa18.32■□□□□ 0.52
CAPN1-222ENST00000532285 C11orf44Q8N8P7 122 aa18.32■□□□□ 0.52
CAPN1-222ENST00000532285 WIPF2Q8TF74 440 aaPredicted RBP18.32■□□□□ 0.52
CAPN1-222ENST00000532285 RTN4IP1Q8WWV3 396 aaPredicted RBP18.32■□□□□ 0.52
CAPN1-222ENST00000532285 GALMQ96C23 342 aa18.32■□□□□ 0.52
CAPN1-222ENST00000532285 CHMP1AQ9HD42 196 aaPredicted RBP18.32■□□□□ 0.52
CAPN1-222ENST00000532285 ABRACLQ9P1F3 81 aa18.32■□□□□ 0.52
CAPN1-222ENST00000532285 JPT1Q9UK76 154 aa18.32■□□□□ 0.52
CAPN1-222ENST00000532285 RAB22AQ9UL26 194 aa18.32■□□□□ 0.52
CAPN1-222ENST00000532285 LDLRAD4O15165 306 aa18.31■□□□□ 0.52
CAPN1-222ENST00000532285 TXNL1O43396 289 aa18.31■□□□□ 0.52
CAPN1-222ENST00000532285 FBXO24O75426 580 aa18.31■□□□□ 0.52
CAPN1-222ENST00000532285 CSF1P09603 554 aa18.31■□□□□ 0.52
CAPN1-222ENST00000532285 RAB3BP20337 219 aa18.31■□□□□ 0.52
CAPN1-222ENST00000532285 VEGFCP49767 419 aa18.31■□□□□ 0.52
CAPN1-222ENST00000532285 ZNF137PP52743 207 aa18.31■□□□□ 0.52
CAPN1-222ENST00000532285 HMGN3Q15651 99 aa18.31■□□□□ 0.52
CAPN1-222ENST00000532285 TMEM95Q3KNT9 176 aa18.31■□□□□ 0.52
CAPN1-222ENST00000532285 C22orf42Q6IC83 251 aa18.31■□□□□ 0.52
CAPN1-222ENST00000532285 ZNF880Q6PDB4 577 aa18.31■□□□□ 0.52
CAPN1-222ENST00000532285 MOB1BQ7L9L4 216 aa18.31■□□□□ 0.52
CAPN1-222ENST00000532285 OR52L2PQ8NGH6 319 aa18.31■□□□□ 0.52
CAPN1-222ENST00000532285 OR56B1Q8NGI3 324 aa18.31■□□□□ 0.52
CAPN1-222ENST00000532285 TMEM272A0A1B0GTI8 110 aa18.3■□□□□ 0.52
CAPN1-222ENST00000532285 SHISA3A0PJX4 238 aa18.3■□□□□ 0.52
CAPN1-222ENST00000532285 IFITM5A6NNB3 132 aa18.3■□□□□ 0.52
CAPN1-222ENST00000532285 FOXI3A8MTJ6 420 aaPredicted RBP18.3■□□□□ 0.52
CAPN1-222ENST00000532285 YPEL1O60688 119 aa18.3■□□□□ 0.52
CAPN1-222ENST00000532285 RGS11O94810 467 aa18.3■□□□□ 0.52
CAPN1-222ENST00000532285 IGKV1D-33P01593 117 aa18.3■□□□□ 0.52
CAPN1-222ENST00000532285 IGKV1-33P01594 117 aa18.3■□□□□ 0.52
CAPN1-222ENST00000532285 FGF9P31371 208 aaPredicted RBP18.3■□□□□ 0.52
CAPN1-222ENST00000532285 TMEM50BP56557 158 aa18.3■□□□□ 0.52
CAPN1-222ENST00000532285 OR10A3P58181 314 aa18.3■□□□□ 0.52
CAPN1-222ENST00000532285 EBI3Q14213 229 aa18.3■□□□□ 0.52
CAPN1-222ENST00000532285 HNF4GQ14541 408 aa18.3■□□□□ 0.52
CAPN1-222ENST00000532285 GNMTQ14749 295 aa18.3■□□□□ 0.52
CAPN1-222ENST00000532285 LY6G6FQ5SQ64 297 aa18.3■□□□□ 0.52
CAPN1-222ENST00000532285 C5orf24Q7Z6I8 188 aa18.3■□□□□ 0.52
CAPN1-222ENST00000532285 YPEL2Q96QA6 119 aa18.3■□□□□ 0.52
CAPN1-222ENST00000532285 AK3Q9UIJ7 227 aa18.3■□□□□ 0.52
CAPN1-222ENST00000532285 TRBV6-6A0A0A6YYG2 114 aa18.29■□□□□ 0.52
CAPN1-222ENST00000532285 TSPAN15O95858 294 aa18.29■□□□□ 0.52
CAPN1-222ENST00000532285 CD1BP29016 333 aa18.29■□□□□ 0.52
CAPN1-222ENST00000532285 PPP1CCP36873 323 aaKnown RBP18.29■□□□□ 0.52
CAPN1-222ENST00000532285 TGIF2LXQ8IUE1 241 aa18.29■□□□□ 0.52
CAPN1-222ENST00000532285 IZUMO1Q8IYV9 350 aa18.29■□□□□ 0.52
CAPN1-222ENST00000532285 SETD6Q8TBK2 473 aa18.29■□□□□ 0.52
CAPN1-222ENST00000532285 MGAT4AQ9UM21 535 aa18.29■□□□□ 0.52
CAPN1-222ENST00000532285 STUB1Q9UNE7 303 aa18.29■□□□□ 0.52
CAPN1-222ENST00000532285 CMYA5Q8N3K9 4069 aa18.29■□□□□ 0.52
CAPN1-222ENST00000532285 FGF16O43320 207 aa18.28■□□□□ 0.52
CAPN1-222ENST00000532285 CD28P10747 220 aa18.28■□□□□ 0.52
CAPN1-222ENST00000532285 KCTD21Q4G0X4 260 aa18.28■□□□□ 0.52
CAPN1-222ENST00000532285 C9orf152Q5JTZ5 239 aa18.28■□□□□ 0.52
CAPN1-222ENST00000532285 CENPVQ7Z7K6 275 aaPredicted RBP18.28■□□□□ 0.52
CAPN1-222ENST00000532285 LYG1Q8N1E2 194 aa18.28■□□□□ 0.52
CAPN1-222ENST00000532285 OR2T10Q8NGZ9 312 aa18.28■□□□□ 0.52
CAPN1-222ENST00000532285 IL1F10Q8WWZ1 152 aa18.28■□□□□ 0.52
CAPN1-222ENST00000532285 ARHGAP5-AS1Q96IT6 56 aa18.28■□□□□ 0.52
CAPN1-222ENST00000532285 ABHD14AQ9BUJ0 271 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms