RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 ZFP41Q8N8Y5 198 aa12.34□□□□□ -0.43
CHMP4A-204ENST00000530996 OR1N2Q8NGR9 330 aa12.34□□□□□ -0.43
CHMP4A-204ENST00000530996 CT45A3Q8NHU0 189 aa12.34□□□□□ -0.43
CHMP4A-204ENST00000530996 MRPL20Q9BYC9 149 aaKnown RBP12.34□□□□□ -0.43
CHMP4A-204ENST00000530996 BANF2Q9H503 90 aa12.34□□□□□ -0.43
CHMP4A-204ENST00000530996 GNB4Q9HAV0 340 aa12.34□□□□□ -0.43
CHMP4A-204ENST00000530996 FGF20Q9NP95 211 aaPredicted RBP12.34□□□□□ -0.43
CHMP4A-204ENST00000530996 MRPS18AQ9NVS2 196 aaKnown RBP12.34□□□□□ -0.43
CHMP4A-204ENST00000530996 CHCHD3Q9NX63 227 aaKnown RBP12.34□□□□□ -0.43
CHMP4A-204ENST00000530996 KCNIP1Q9NZI2 227 aa12.34□□□□□ -0.43
CHMP4A-204ENST00000530996 RCC2Q9P258 522 aaKnown RBP12.34□□□□□ -0.43
CHMP4A-204ENST00000530996 SCOCQ9UIL1 159 aa12.34□□□□□ -0.43
CHMP4A-204ENST00000530996 VSIG4Q9Y279 399 aa12.34□□□□□ -0.43
CHMP4A-204ENST00000530996 SMAD5-AS1Q9Y6J3 95 aa12.34□□□□□ -0.43
CHMP4A-204ENST00000530996 TRAV8-7A0A075B6U6 113 aa12.33□□□□□ -0.44
CHMP4A-204ENST00000530996 PNMA8CA0A1B0GUJ8 204 aa12.33□□□□□ -0.44
CHMP4A-204ENST00000530996 IRGMA1A4Y4 181 aa12.33□□□□□ -0.44
CHMP4A-204ENST00000530996 UBE2QL1A1L167 161 aa12.33□□□□□ -0.44
CHMP4A-204ENST00000530996 C3orf84H3BNL1 204 aa12.33□□□□□ -0.44
CHMP4A-204ENST00000530996 LANCL1O43813 399 aa12.33□□□□□ -0.44
CHMP4A-204ENST00000530996 SAP30O75446 220 aa12.33□□□□□ -0.44
CHMP4A-204ENST00000530996 RCC1P18754 421 aaPredicted RBP12.33□□□□□ -0.44
CHMP4A-204ENST00000530996 DCKP27707 260 aa12.33□□□□□ -0.44
CHMP4A-204ENST00000530996 PPP1CCP36873 323 aaKnown RBP12.33□□□□□ -0.44
CHMP4A-204ENST00000530996 ACTBP60709 375 aa12.33□□□□□ -0.44
CHMP4A-204ENST00000530996 GABPB1Q06547 395 aaPredicted RBP12.33□□□□□ -0.44
CHMP4A-204ENST00000530996 ECSCRQ19T08 205 aa12.33□□□□□ -0.44
CHMP4A-204ENST00000530996 Q499Y3 187 aa12.33□□□□□ -0.44
CHMP4A-204ENST00000530996 FAM27D1Q5T7N8 215 aa12.33□□□□□ -0.44
CHMP4A-204ENST00000530996 GHSRQ92847 366 aa12.33□□□□□ -0.44
CHMP4A-204ENST00000530996 OR14A2Q96R54 314 aa12.33□□□□□ -0.44
CHMP4A-204ENST00000530996 SELENOIQ9C0D9 397 aa12.33□□□□□ -0.44
CHMP4A-204ENST00000530996 TAF9BQ9HBM6 251 aa12.33□□□□□ -0.44
CHMP4A-204ENST00000530996 KIAA1456Q9P272 454 aa12.33□□□□□ -0.44
CHMP4A-204ENST00000530996 EXOSC1Q9Y3B2 195 aaKnown RBP12.33□□□□□ -0.44
CHMP4A-204ENST00000530996 TRAV41A0A0B4J266 112 aa12.32□□□□□ -0.44
CHMP4A-204ENST00000530996 TRBV5-5A0A0J9YX44 114 aa12.32□□□□□ -0.44
CHMP4A-204ENST00000530996 G3V318 75 aa12.32□□□□□ -0.44
CHMP4A-204ENST00000530996 NBR2O15453 112 aa12.32□□□□□ -0.44
CHMP4A-204ENST00000530996 MAS1P04201 325 aa12.32□□□□□ -0.44
CHMP4A-204ENST00000530996 MGMTP16455 207 aa12.32□□□□□ -0.44
CHMP4A-204ENST00000530996 IGFBP3P17936 291 aaPredicted RBP12.32□□□□□ -0.44
CHMP4A-204ENST00000530996 FSTP19883 344 aa12.32□□□□□ -0.44
CHMP4A-204ENST00000530996 INSL3P51460 131 aa12.32□□□□□ -0.44
CHMP4A-204ENST00000530996 ZNF134P52741 427 aa12.32□□□□□ -0.44
CHMP4A-204ENST00000530996 GNB1P62873 340 aa12.32□□□□□ -0.44
CHMP4A-204ENST00000530996 ADARB1P78563 741 aaKnown RBP12.32□□□□□ -0.44
CHMP4A-204ENST00000530996 YIF1BQ5BJH7 314 aa12.32□□□□□ -0.44
CHMP4A-204ENST00000530996 ABHD5Q8WTS1 349 aa12.32□□□□□ -0.44
CHMP4A-204ENST00000530996 UBE2E2Q96LR5 201 aa12.32□□□□□ -0.44
CHMP4A-204ENST00000530996 SLC29A1Q99808 456 aa12.32□□□□□ -0.44
CHMP4A-204ENST00000530996 KLK15Q9H2R5 256 aa12.32□□□□□ -0.44
CHMP4A-204ENST00000530996 OR51J1Q9H342 316 aa12.32□□□□□ -0.44
CHMP4A-204ENST00000530996 BABAM2Q9NXR7 383 aa12.32□□□□□ -0.44
CHMP4A-204ENST00000530996 ZNF580Q9UK33 172 aa12.32□□□□□ -0.44
CHMP4A-204ENST00000530996 A0A1W2PPK0 400 aa12.31□□□□□ -0.44
CHMP4A-204ENST00000530996 OVOL1O14753 267 aa12.31□□□□□ -0.44
CHMP4A-204ENST00000530996 WBP4O75554 376 aaKnown RBP12.31□□□□□ -0.44
CHMP4A-204ENST00000530996 HLA-DRB1P01911 266 aa12.31□□□□□ -0.44
CHMP4A-204ENST00000530996 CNTFRP26992 372 aa12.31□□□□□ -0.44
CHMP4A-204ENST00000530996 CHATP28329 748 aa12.31□□□□□ -0.44
CHMP4A-204ENST00000530996 BLVRBP30043 206 aaPredicted RBP12.31□□□□□ -0.44
CHMP4A-204ENST00000530996 PLGLAQ15195 96 aa12.31□□□□□ -0.44
CHMP4A-204ENST00000530996 C10orf67Q8IYJ2 551 aa12.31□□□□□ -0.44
CHMP4A-204ENST00000530996 ZNF491Q8N8L2 437 aa12.31□□□□□ -0.44
CHMP4A-204ENST00000530996 OR52L2PQ8NGH6 319 aa12.31□□□□□ -0.44
CHMP4A-204ENST00000530996 FAM46BQ96A09 425 aa12.31□□□□□ -0.44
CHMP4A-204ENST00000530996 MRPS24Q96EL2 167 aaKnown RBP12.31□□□□□ -0.44
CHMP4A-204ENST00000530996 SMPD3Q9NY59 655 aaPredicted RBP12.31□□□□□ -0.44
CHMP4A-204ENST00000530996 JPT1Q9UK76 154 aa12.31□□□□□ -0.44
CHMP4A-204ENST00000530996 DIMT1Q9UNQ2 313 aaKnown RBP12.31□□□□□ -0.44
CHMP4A-204ENST00000530996 A3GALT2U3KPV4 340 aa12.31□□□□□ -0.44
CHMP4A-204ENST00000530996 I3L521 148 aa12.3□□□□□ -0.44
CHMP4A-204ENST00000530996 OGG1O15527 345 aa12.3□□□□□ -0.44
CHMP4A-204ENST00000530996 CA11O75493 328 aa12.3□□□□□ -0.44
CHMP4A-204ENST00000530996 RGS11O94810 467 aa12.3□□□□□ -0.44
CHMP4A-204ENST00000530996 LALBAP00709 142 aa12.3□□□□□ -0.44
CHMP4A-204ENST00000530996 FUT3P21217 361 aa12.3□□□□□ -0.44
CHMP4A-204ENST00000530996 VHLP40337 213 aa12.3□□□□□ -0.44
CHMP4A-204ENST00000530996 ASPHD1Q5U4P2 390 aa12.3□□□□□ -0.44
CHMP4A-204ENST00000530996 ZNF429Q86V71 674 aa12.3□□□□□ -0.44
CHMP4A-204ENST00000530996 PQLC1Q8N2U9 271 aa12.3□□□□□ -0.44
CHMP4A-204ENST00000530996 MUC7Q8TAX7 377 aa12.3□□□□□ -0.44
CHMP4A-204ENST00000530996 MYOZ3Q8TDC0 251 aa12.3□□□□□ -0.44
CHMP4A-204ENST00000530996 DCUN1D4Q92564 292 aa12.3□□□□□ -0.44
CHMP4A-204ENST00000530996 RCHY1Q96PM5 261 aa12.3□□□□□ -0.44
CHMP4A-204ENST00000530996 CHCHD6Q9BRQ6 235 aa12.3□□□□□ -0.44
CHMP4A-204ENST00000530996 ANKRD60Q9BZ19 345 aa12.3□□□□□ -0.44
CHMP4A-204ENST00000530996 CST11Q9H112 138 aa12.3□□□□□ -0.44
CHMP4A-204ENST00000530996 ALX4Q9H161 411 aaPredicted RBP12.3□□□□□ -0.44
CHMP4A-204ENST00000530996 PALMDQ9NP74 551 aa12.3□□□□□ -0.44
CHMP4A-204ENST00000530996 FAM53CQ9NYF3 392 aa12.3□□□□□ -0.44
CHMP4A-204ENST00000530996 CLEC2DQ9UHP7 191 aa12.3□□□□□ -0.44
CHMP4A-204ENST00000530996 IGHV7-81A0A0B4J1V7 117 aa12.29□□□□□ -0.44
CHMP4A-204ENST00000530996 A0A1W2PN81 502 aa12.29□□□□□ -0.44
CHMP4A-204ENST00000530996 FAM90A10PA6NDY2 464 aa12.29□□□□□ -0.44
CHMP4A-204ENST00000530996 FAM90A7PA6NKC0 464 aa12.29□□□□□ -0.44
CHMP4A-204ENST00000530996 FAM90A23PA8MXZ1 464 aa12.29□□□□□ -0.44
CHMP4A-204ENST00000530996 PDCD6O75340 191 aa12.29□□□□□ -0.44
CHMP4A-204ENST00000530996 CHRNA7P36544 502 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms