RNA–Protein interactions for RNA: ENST00000530861.5

BDNF-215, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,918 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-215ENST00000530861 SLC39A9Q9NUM3 307 aa10.73□□□□□ -0.69
BDNF-215ENST00000530861 TP53TG5Q9Y2B4 290 aa10.73□□□□□ -0.69
BDNF-215ENST00000530861 LYNX1G3V0Z9 82 aa10.73□□□□□ -0.69
BDNF-215ENST00000530861 LYNX1P0DP58 116 aa10.73□□□□□ -0.69
BDNF-215ENST00000530861 PLGLAQ15195 96 aa10.73□□□□□ -0.69
BDNF-215ENST00000530861 FAM122CQ6P4D5 195 aa10.73□□□□□ -0.69
BDNF-215ENST00000530861 LHFPL5Q8TAF8 219 aa10.73□□□□□ -0.69
BDNF-215ENST00000530861 REPIN1Q9BWE0 567 aaKnown RBP10.73□□□□□ -0.69
BDNF-215ENST00000530861 NAV3Q8IVL0 2385 aa10.73□□□□□ -0.69
BDNF-215ENST00000530861 GYPAP02724 150 aa10.73□□□□□ -0.69
BDNF-215ENST00000530861 S100A9P06702 114 aaKnown RBP10.73□□□□□ -0.69
BDNF-215ENST00000530861 MUC1P15941 1255 aaPredicted RBP10.73□□□□□ -0.69
BDNF-215ENST00000530861 FGF12P61328 243 aa10.73□□□□□ -0.69
BDNF-215ENST00000530861 ERVK-16P61578 105 aa10.73□□□□□ -0.69
BDNF-215ENST00000530861 GNB1P62873 340 aa10.73□□□□□ -0.69
BDNF-215ENST00000530861 BHLHA15Q7RTS1 189 aaPredicted RBP10.73□□□□□ -0.69
BDNF-215ENST00000530861 OR4A16Q8NH70 328 aa10.73□□□□□ -0.69
BDNF-215ENST00000530861 RARRES2Q99969 163 aa10.73□□□□□ -0.69
BDNF-215ENST00000530861 ALX4Q9H161 411 aaPredicted RBP10.73□□□□□ -0.69
BDNF-215ENST00000530861 PIGMQ9H3S5 423 aa10.73□□□□□ -0.69
BDNF-215ENST00000530861 LRP5LA4QPB2 252 aa10.72□□□□□ -0.69
BDNF-215ENST00000530861 PLPPR1Q8TBJ4 325 aa10.72□□□□□ -0.69
BDNF-215ENST00000530861 SCNM1Q9BWG6 230 aa10.72□□□□□ -0.69
BDNF-215ENST00000530861 SLC25A31Q9H0C2 315 aa10.72□□□□□ -0.69
BDNF-215ENST00000530861 OSGIN2Q9Y236 505 aa10.72□□□□□ -0.69
BDNF-215ENST00000530861 NPIPB13A6NJU9 1138 aa10.72□□□□□ -0.69
BDNF-215ENST00000530861 NPIPB4C9JG80 1138 aa10.72□□□□□ -0.69
BDNF-215ENST00000530861 PAX6P26367 422 aa10.72□□□□□ -0.69
BDNF-215ENST00000530861 HOXA6P31267 233 aa10.72□□□□□ -0.69
BDNF-215ENST00000530861 ZNF528Q3MIS6 628 aa10.72□□□□□ -0.69
BDNF-215ENST00000530861 PTX4Q96A99 478 aa10.72□□□□□ -0.69
BDNF-215ENST00000530861 ZNF891A8MT65 544 aaPredicted RBP10.72□□□□□ -0.69
BDNF-215ENST00000530861 HSPB1P04792 205 aaKnown RBP10.72□□□□□ -0.69
BDNF-215ENST00000530861 MMP7P09237 267 aaPredicted RBP10.72□□□□□ -0.69
BDNF-215ENST00000530861 NPBWR1P48145 328 aa10.72□□□□□ -0.69
BDNF-215ENST00000530861 HOXA1P49639 335 aaPredicted RBP10.72□□□□□ -0.69
BDNF-215ENST00000530861 ADIRFQ15847 76 aa10.72□□□□□ -0.69
BDNF-215ENST00000530861 GUK1Q16774 197 aa10.72□□□□□ -0.69
BDNF-215ENST00000530861 PDLIM3Q53GG5 364 aaPredicted RBP10.72□□□□□ -0.69
BDNF-215ENST00000530861 PRR30Q53SZ7 412 aaPredicted RBP10.72□□□□□ -0.69
BDNF-215ENST00000530861 SLC2A8Q9NY64 477 aa10.72□□□□□ -0.69
BDNF-215ENST00000530861 LOC390937A0A1W2PQ73 354 aa10.71□□□□□ -0.69
BDNF-215ENST00000530861 ZNF727A8MUV8 499 aa10.71□□□□□ -0.69
BDNF-215ENST00000530861 J3QT63 122 aa10.71□□□□□ -0.69
BDNF-215ENST00000530861 SNAPC5O75971 98 aa10.71□□□□□ -0.69
BDNF-215ENST00000530861 HKR1P10072 659 aa10.71□□□□□ -0.69
BDNF-215ENST00000530861 TAGLN2P37802 199 aaKnown RBP10.71□□□□□ -0.69
BDNF-215ENST00000530861 TNFAIP6P98066 277 aaPredicted RBP10.71□□□□□ -0.69
BDNF-215ENST00000530861 EWSR1Q01844 656 aaKnown RBP eCLIP10.71□□□□□ -0.69
BDNF-215ENST00000530861 HIST3H3Q16695 136 aa10.71□□□□□ -0.69
BDNF-215ENST00000530861 PUSL1Q8N0Z8 303 aaKnown RBP10.71□□□□□ -0.69
BDNF-215ENST00000530861 SSMEM1Q8WWF3 244 aa10.71□□□□□ -0.69
BDNF-215ENST00000530861 GMPPAQ96IJ6 420 aaPredicted RBP10.71□□□□□ -0.69
BDNF-215ENST00000530861 IER2Q9BTL4 223 aa10.71□□□□□ -0.69
BDNF-215ENST00000530861 PRO3102Q9H379 93 aa10.71□□□□□ -0.69
BDNF-215ENST00000530861 LINC00862A6NCI5 91 aa10.71□□□□□ -0.69
BDNF-215ENST00000530861 SPINK4O60575 86 aa10.71□□□□□ -0.69
BDNF-215ENST00000530861 EGR1P18146 543 aa10.71□□□□□ -0.69
BDNF-215ENST00000530861 SNCAP37840 140 aa10.71□□□□□ -0.69
BDNF-215ENST00000530861 FRZBQ92765 325 aa10.71□□□□□ -0.69
BDNF-215ENST00000530861 TECTBQ96PL2 329 aa10.71□□□□□ -0.69
BDNF-215ENST00000530861 TAAR6Q96RI8 345 aa10.71□□□□□ -0.69
BDNF-215ENST00000530861 LPAR2Q9HBW0 351 aa10.71□□□□□ -0.69
BDNF-215ENST00000530861 ZNRD1Q9P1U0 126 aa10.71□□□□□ -0.69
BDNF-215ENST00000530861 ABCA12Q86UK0 2595 aa10.71□□□□□ -0.7
BDNF-215ENST00000530861 A0A1W2PPV4 95 aa10.71□□□□□ -0.7
BDNF-215ENST00000530861 HBZP02008 142 aa10.71□□□□□ -0.7
BDNF-215ENST00000530861 CD55P08174 381 aa10.71□□□□□ -0.7
BDNF-215ENST00000530861 ATP6V0CP27449 155 aa10.71□□□□□ -0.7
BDNF-215ENST00000530861 LHX4Q969G2 390 aa10.71□□□□□ -0.7
BDNF-215ENST00000530861 NTNG2Q96CW9 530 aa10.71□□□□□ -0.7
BDNF-215ENST00000530861 DCAF16Q9NXF7 216 aa10.71□□□□□ -0.7
BDNF-215ENST00000530861 OR2W1Q9Y3N9 320 aa10.71□□□□□ -0.7
BDNF-215ENST00000530861 PSPNO60542 156 aa10.7□□□□□ -0.7
BDNF-215ENST00000530861 CLDN14O95500 239 aa10.7□□□□□ -0.7
BDNF-215ENST00000530861 COX7A1P24310 79 aa10.7□□□□□ -0.7
BDNF-215ENST00000530861 CATR1Q13166 79 aa10.7□□□□□ -0.7
BDNF-215ENST00000530861 PPP1R35Q8TAP8 253 aa10.7□□□□□ -0.7
BDNF-215ENST00000530861 PBDC1Q9BVG4 233 aa10.7□□□□□ -0.7
BDNF-215ENST00000530861 MPC1Q9Y5U8 109 aa10.7□□□□□ -0.7
BDNF-215ENST00000530861 LINC01387J3KSC0 135 aa10.7□□□□□ -0.7
BDNF-215ENST00000530861 PGLYRP1O75594 196 aaPredicted RBP10.7□□□□□ -0.7
BDNF-215ENST00000530861 LY6HO94772 140 aa10.7□□□□□ -0.7
BDNF-215ENST00000530861 SNAPINO95295 136 aa10.7□□□□□ -0.7
BDNF-215ENST00000530861 CST4P01036 141 aa10.7□□□□□ -0.7
BDNF-215ENST00000530861 KLF3P57682 345 aaPredicted RBP10.7□□□□□ -0.7
BDNF-215ENST00000530861 ABLIM2Q6H8Q1 611 aa10.7□□□□□ -0.7
BDNF-215ENST00000530861 LINC01560Q8TB33 94 aa10.7□□□□□ -0.7
BDNF-215ENST00000530861 SNRNP40Q96DI7 357 aaKnown RBP10.7□□□□□ -0.7
BDNF-215ENST00000530861 MRPS24Q96EL2 167 aaKnown RBP10.7□□□□□ -0.7
BDNF-215ENST00000530861 PATZ1Q9HBE1 687 aaKnown RBP10.7□□□□□ -0.7
BDNF-215ENST00000530861 C19orf12Q9NSK7 152 aa10.7□□□□□ -0.7
BDNF-215ENST00000530861 UQCC1Q9NVA1 299 aa10.7□□□□□ -0.7
BDNF-215ENST00000530861 HIVEP3Q5T1R4 2406 aa10.7□□□□□ -0.7
BDNF-215ENST00000530861 ZNF292O60281 2723 aa10.7□□□□□ -0.7
BDNF-215ENST00000530861 hCG_1809904A0A1W2PP81 198 aa10.7□□□□□ -0.7
BDNF-215ENST00000530861 A0A1W2PR64 198 aa10.7□□□□□ -0.7
BDNF-215ENST00000530861 A0A1W2PRV1 198 aa10.7□□□□□ -0.7
BDNF-215ENST00000530861 TMEM30CPA0ZSE6 113 aa10.7□□□□□ -0.7
BDNF-215ENST00000530861 TMEM218A2RU14 115 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms