RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 SLC25A22Q9H936 323 aa12.13□□□□□ -0.47
PCF11-204ENST00000530660 ZNF586Q9NXT0 402 aa12.13□□□□□ -0.47
PCF11-204ENST00000530660 ADAMTS9Q9P2N4 1935 aa12.13□□□□□ -0.47
PCF11-204ENST00000530660 ARHGEF17Q96PE2 2063 aaPredicted RBP12.13□□□□□ -0.47
PCF11-204ENST00000530660 SEC16AO15027 2179 aa12.13□□□□□ -0.47
PCF11-204ENST00000530660 A0A1W2PQU0 124 aa12.13□□□□□ -0.47
PCF11-204ENST00000530660 NPPCP23582 126 aa12.13□□□□□ -0.47
PCF11-204ENST00000530660 SPIN3Q5JUX0 258 aa12.13□□□□□ -0.47
PCF11-204ENST00000530660 SELENOHQ8IZQ5 122 aaKnown RBP12.13□□□□□ -0.47
PCF11-204ENST00000530660 SSC4DQ8WTU2 575 aa12.13□□□□□ -0.47
PCF11-204ENST00000530660 ZC2HC1AQ96GY0 325 aa12.13□□□□□ -0.47
PCF11-204ENST00000530660 UHRF2Q96PU4 802 aa12.13□□□□□ -0.47
PCF11-204ENST00000530660 SELENOKQ9Y6D0 94 aa12.13□□□□□ -0.47
PCF11-204ENST00000530660 KIAA1549Q9HCM3 1950 aa12.13□□□□□ -0.47
PCF11-204ENST00000530660 MUC22E2RYF6 1773 aaPredicted RBP12.13□□□□□ -0.47
PCF11-204ENST00000530660 TMEM250H0YL14 139 aa12.13□□□□□ -0.47
PCF11-204ENST00000530660 DXOO77932 396 aaKnown RBP12.13□□□□□ -0.47
PCF11-204ENST00000530660 FAHP16930 419 aa12.13□□□□□ -0.47
PCF11-204ENST00000530660 CNKSR3Q6P9H4 555 aa12.13□□□□□ -0.47
PCF11-204ENST00000530660 NRN1Q9NPD7 142 aa12.13□□□□□ -0.47
PCF11-204ENST00000530660 PRSS38A1L453 326 aa12.12□□□□□ -0.47
PCF11-204ENST00000530660 OR2T8A6NH00 312 aa12.12□□□□□ -0.47
PCF11-204ENST00000530660 ANGPTL7O43827 346 aa12.12□□□□□ -0.47
PCF11-204ENST00000530660 GPX1P07203 203 aa12.12□□□□□ -0.47
PCF11-204ENST00000530660 PMCHP20382 165 aa12.12□□□□□ -0.47
PCF11-204ENST00000530660 ZNF133P52736 654 aaPredicted RBP12.12□□□□□ -0.47
PCF11-204ENST00000530660 PPP1CAP62136 330 aa12.12□□□□□ -0.47
PCF11-204ENST00000530660 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.12□□□□□ -0.47
PCF11-204ENST00000530660 ZNF295-AS1Q8N0V1 137 aa12.12□□□□□ -0.47
PCF11-204ENST00000530660 SMIM12Q96EX1 92 aa12.12□□□□□ -0.47
PCF11-204ENST00000530660 MED12Q93074 2177 aa12.12□□□□□ -0.47
PCF11-204ENST00000530660 UTS2O95399 124 aa12.12□□□□□ -0.47
PCF11-204ENST00000530660 ESDP10768 282 aa12.12□□□□□ -0.47
PCF11-204ENST00000530660 NPBWR2P48146 333 aa12.12□□□□□ -0.47
PCF11-204ENST00000530660 PSG4Q00888 419 aa12.12□□□□□ -0.47
PCF11-204ENST00000530660 PDCD1Q15116 288 aa12.12□□□□□ -0.47
PCF11-204ENST00000530660 TBC1D26Q86UD7 250 aa12.12□□□□□ -0.47
PCF11-204ENST00000530660 ZNF114Q8NC26 417 aa12.12□□□□□ -0.47
PCF11-204ENST00000530660 PATE1Q8WXA2 126 aa12.12□□□□□ -0.47
PCF11-204ENST00000530660 TSACCQ96A04 125 aaPredicted RBP12.12□□□□□ -0.47
PCF11-204ENST00000530660 SPIN2AQ99865 258 aa12.12□□□□□ -0.47
PCF11-204ENST00000530660 SPIN2BQ9BPZ2 258 aa12.12□□□□□ -0.47
PCF11-204ENST00000530660 DERL1Q9BUN8 251 aa12.12□□□□□ -0.47
PCF11-204ENST00000530660 RP1P56715 2156 aa12.12□□□□□ -0.47
PCF11-204ENST00000530660 IGLC7A0M8Q6 106 aa12.11□□□□□ -0.47
PCF11-204ENST00000530660 ZNF891A8MT65 544 aaPredicted RBP12.11□□□□□ -0.47
PCF11-204ENST00000530660 K7ERU9 68 aa12.11□□□□□ -0.47
PCF11-204ENST00000530660 DEFA4P12838 97 aa12.11□□□□□ -0.47
PCF11-204ENST00000530660 GLB1P16278 677 aa12.11□□□□□ -0.47
PCF11-204ENST00000530660 AMTP48728 403 aa12.11□□□□□ -0.47
PCF11-204ENST00000530660 HERV-K104P61576 105 aa12.11□□□□□ -0.47
PCF11-204ENST00000530660 RHOGP84095 191 aa12.11□□□□□ -0.47
PCF11-204ENST00000530660 C2orf27AQ580R0 203 aa12.11□□□□□ -0.47
PCF11-204ENST00000530660 LCN12Q6JVE5 192 aa12.11□□□□□ -0.47
PCF11-204ENST00000530660 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.11□□□□□ -0.47
PCF11-204ENST00000530660 DTX1Q86Y01 620 aa12.11□□□□□ -0.47
PCF11-204ENST00000530660 SFTPA2Q8IWL1 248 aa12.11□□□□□ -0.47
PCF11-204ENST00000530660 CCDC71LQ8N9Z2 235 aa12.11□□□□□ -0.47
PCF11-204ENST00000530660 MRPL18Q9H0U6 180 aaKnown RBP12.11□□□□□ -0.47
PCF11-204ENST00000530660 POLR1DQ9Y2S0 133 aa12.11□□□□□ -0.47
PCF11-204ENST00000530660 NCOA6Q14686 2063 aaPredicted RBP12.11□□□□□ -0.47
PCF11-204ENST00000530660 IGHV1-69-2A0A0G2JMI3 117 aa12.11□□□□□ -0.47
PCF11-204ENST00000530660 PAGE4O60829 102 aa12.11□□□□□ -0.47
PCF11-204ENST00000530660 CTSEP14091 401 aa12.11□□□□□ -0.47
PCF11-204ENST00000530660 GNRHRP30968 328 aa12.11□□□□□ -0.47
PCF11-204ENST00000530660 ARR3P36575 388 aa12.11□□□□□ -0.47
PCF11-204ENST00000530660 DLX2Q07687 328 aaPredicted RBP12.11□□□□□ -0.47
PCF11-204ENST00000530660 AMMECR1LQ6DCA0 310 aa12.11□□□□□ -0.47
PCF11-204ENST00000530660 OR1E3Q8WZA6 343 aa12.11□□□□□ -0.47
PCF11-204ENST00000530660 TMEM56Q96MV1 263 aa12.11□□□□□ -0.47
PCF11-204ENST00000530660 CCDC3Q9BQI4 270 aa12.11□□□□□ -0.47
PCF11-204ENST00000530660 TM2D1Q9BX74 207 aa12.11□□□□□ -0.47
PCF11-204ENST00000530660 MRPS16Q9Y3D3 137 aaKnown RBP12.11□□□□□ -0.47
PCF11-204ENST00000530660 TMEM56-RWDD3S4R434 201 aa12.11□□□□□ -0.47
PCF11-204ENST00000530660 ACRP10323 421 aa12.11□□□□□ -0.47
PCF11-204ENST00000530660 IL12BP29460 328 aa12.11□□□□□ -0.47
PCF11-204ENST00000530660 PRTGQ2VWP7 1150 aa12.11□□□□□ -0.47
PCF11-204ENST00000530660 HAPLN4Q86UW8 402 aa12.11□□□□□ -0.47
PCF11-204ENST00000530660 TAAR3PQ9P1P4 343 aa12.11□□□□□ -0.47
PCF11-204ENST00000530660 ERRFI1Q9UJM3 462 aaPredicted RBP12.11□□□□□ -0.47
PCF11-204ENST00000530660 H0Y8X5 98 aa12.1□□□□□ -0.47
PCF11-204ENST00000530660 TIAF1O95411 115 aa12.1□□□□□ -0.47
PCF11-204ENST00000530660 CRYAAP02489 173 aa12.1□□□□□ -0.47
PCF11-204ENST00000530660 CDAP32320 146 aa12.1□□□□□ -0.47
PCF11-204ENST00000530660 YPEL3P61236 119 aaPredicted RBP12.1□□□□□ -0.47
PCF11-204ENST00000530660 RPS18P62269 152 aaKnown RBP12.1□□□□□ -0.47
PCF11-204ENST00000530660 OR10V1Q8NGI7 309 aa12.1□□□□□ -0.47
PCF11-204ENST00000530660 SARAFQ96BY9 339 aa12.1□□□□□ -0.47
PCF11-204ENST00000530660 DGAT2Q96PD7 388 aa12.1□□□□□ -0.47
PCF11-204ENST00000530660 MYO15AQ9UKN7 3530 aa12.1□□□□□ -0.47
PCF11-204ENST00000530660 IGHV2-26A0A0B4J1V2 119 aa12.1□□□□□ -0.47
PCF11-204ENST00000530660 GAGE12BA1L429 117 aa12.1□□□□□ -0.47
PCF11-204ENST00000530660 RNF212BA8MTL3 300 aa12.1□□□□□ -0.47
PCF11-204ENST00000530660 RBFOX2O43251 390 aaKnown RBP eCLIP12.1□□□□□ -0.47
PCF11-204ENST00000530660 NIT1Q86X76 327 aa12.1□□□□□ -0.47
PCF11-204ENST00000530660 BAHD1Q8TBE0 780 aaPredicted RBP12.1□□□□□ -0.47
PCF11-204ENST00000530660 DDIT4LQ96D03 193 aa12.1□□□□□ -0.47
PCF11-204ENST00000530660 NUDT22Q9BRQ3 303 aa12.1□□□□□ -0.47
PCF11-204ENST00000530660 LRFN3Q9BTN0 628 aa12.1□□□□□ -0.47
PCF11-204ENST00000530660 A0A0G2JRQ6 117 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms