RNA–Protein interactions for RNA: ENST00000530459.1

GMDS-207, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-207ENST00000530459 MESP2Q0VG99 397 aa4.29□□□□□ -1.72
GMDS-207ENST00000530459 SMAD4Q13485 552 aaKnown RBP4.29□□□□□ -1.72
GMDS-207ENST00000530459 MMDQ15546 238 aa4.29□□□□□ -1.72
GMDS-207ENST00000530459 TRIP6Q15654 476 aaKnown RBP4.29□□□□□ -1.72
GMDS-207ENST00000530459 PMCHL1Q16048 86 aa4.29□□□□□ -1.72
GMDS-207ENST00000530459 NNATQ16517 81 aa4.29□□□□□ -1.72
GMDS-207ENST00000530459 TDRG1Q3Y452 100 aa4.29□□□□□ -1.72
GMDS-207ENST00000530459 FBLN7Q53RD9 439 aa4.29□□□□□ -1.72
GMDS-207ENST00000530459 SLC25A53Q5H9E4 307 aa4.29□□□□□ -1.72
GMDS-207ENST00000530459 OR10J3Q5JRS4 329 aa4.29□□□□□ -1.72
GMDS-207ENST00000530459 FAM78BQ5VT40 261 aa4.29□□□□□ -1.72
GMDS-207ENST00000530459 VWA1Q6PCB0 445 aa4.29□□□□□ -1.72
GMDS-207ENST00000530459 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.29□□□□□ -1.727e-11■■■■■ 39.5
GMDS-207ENST00000530459 C19orf35Q6ZS72 473 aa4.29□□□□□ -1.72
GMDS-207ENST00000530459 CPEB2Q7Z5Q1 589 aaKnown RBP4.29□□□□□ -1.72
GMDS-207ENST00000530459 TBC1D26Q86UD7 250 aa4.29□□□□□ -1.72
GMDS-207ENST00000530459 WDFY1Q8IWB7 410 aa4.29□□□□□ -1.72
GMDS-207ENST00000530459 UEVLDQ8IX04 471 aa4.29□□□□□ -1.72
GMDS-207ENST00000530459 NECAP1Q8NC96 275 aa4.29□□□□□ -1.72
GMDS-207ENST00000530459 RNF138Q8WVD3 245 aa4.29□□□□□ -1.72
GMDS-207ENST00000530459 TAF15Q92804 592 aaKnown RBP eCLIP4.29□□□□□ -1.722e-6■□□□□ 8.8
GMDS-207ENST00000530459 RAB1CQ92928 201 aa4.29□□□□□ -1.72
GMDS-207ENST00000530459 GPR146Q96CH1 333 aa4.29□□□□□ -1.72
GMDS-207ENST00000530459 SMIM12Q96EX1 92 aa4.29□□□□□ -1.72
GMDS-207ENST00000530459 CYYR1Q96J86 154 aa4.29□□□□□ -1.72
GMDS-207ENST00000530459 FAM71F1Q96KD3 344 aaPredicted RBP4.29□□□□□ -1.72
GMDS-207ENST00000530459 LYZL4Q96KX0 146 aa4.29□□□□□ -1.72
GMDS-207ENST00000530459 HSPB9Q9BQS6 159 aa4.29□□□□□ -1.72
GMDS-207ENST00000530459 HDHD3Q9BSH5 251 aaPredicted RBP4.29□□□□□ -1.72
GMDS-207ENST00000530459 RSG1Q9BU20 258 aa4.29□□□□□ -1.72
GMDS-207ENST00000530459 VSIRQ9H7M9 311 aa4.29□□□□□ -1.72
GMDS-207ENST00000530459 SLC35D1Q9NTN3 355 aa4.29□□□□□ -1.72
GMDS-207ENST00000530459 ZNF586Q9NXT0 402 aa4.29□□□□□ -1.72
GMDS-207ENST00000530459 PAM16Q9Y3D7 125 aa4.29□□□□□ -1.72
GMDS-207ENST00000530459 B3GALT1Q9Y5Z6 326 aa4.29□□□□□ -1.72
GMDS-207ENST00000530459 HCFC2Q9Y5Z7 792 aa4.29□□□□□ -1.72
GMDS-207ENST00000530459 CACNA1CQ13936 2221 aa4.29□□□□□ -1.72
GMDS-207ENST00000530459 IGKV3D-11A0A0A0MRZ8 115 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 TRBV6-6A0A0A6YYG2 114 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 KIR2DS5A0A0G2JLQ3 304 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 A0A0G2JNG1 304 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 IGLC7A0M8Q6 106 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 C17orf105B2RV13 164 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 TMEM238C9JI98 176 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 DIRC3C9JPN6 131 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 NPIPA2E9PIF3 369 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 KIR2DS3K7RE56 304 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 SIRPB1O00241 398 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 SYNGR2O43760 224 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 SERF1AO75920 110 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 OR2J2O76002 312 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 IGHG1P01857 330 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 MT-ND6P03923 174 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 NBEAP1P0C6P0 100 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 PVRP15151 417 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 DRD1P21728 446 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 HNRNPA2B1P22626 353 aaKnown RBP4.28□□□□□ -1.72
GMDS-207ENST00000530459 TNFSF4P23510 183 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 CD1BP29016 333 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 S100GP29377 79 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 IL12BP29460 328 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 TSPOP30536 169 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 OPRM1P35372 400 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 CDKN1AP38936 164 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 RRADP55042 308 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 FGF8P55075 233 aaPredicted RBP4.28□□□□□ -1.72
GMDS-207ENST00000530459 BIDP55957 195 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 FBXW4P57775 412 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 FXYD4P59646 89 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 RHOBP62745 196 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 RPL19P84098 196 aaKnown RBP4.28□□□□□ -1.72
GMDS-207ENST00000530459 POU3F1Q03052 451 aaPredicted RBP4.28□□□□□ -1.72
GMDS-207ENST00000530459 TLE3Q04726 772 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 KIR2DS5Q14953 304 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 RTP5Q14D33 572 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 CNN3Q15417 329 aaKnown RBP4.28□□□□□ -1.72
GMDS-207ENST00000530459 SPATA45Q537H7 98 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 LRRC10Q5BKY1 277 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 CST9LP1Q5W188 147 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 TMEM42Q69YG0 159 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 SLC25A24Q6NUK1 477 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 TMEM14EPQ6UXP3 125 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 MEX3BQ6ZN04 569 aaKnown RBP4.28□□□□□ -1.72
GMDS-207ENST00000530459 HAPLN4Q86UW8 402 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 OOSP2Q86WS3 158 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 COMMD2Q86X83 199 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 KMT5CQ86Y97 462 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 CALHM1Q8IU99 346 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 WFDC8Q8IUA0 241 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 MUC15Q8N387 334 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 RPP25LQ8N5L8 163 aaKnown RBP4.28□□□□□ -1.72
GMDS-207ENST00000530459 TMEM217Q8N7C4 229 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 ZNF441Q8N8Z8 693 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 ZIC4Q8N9L1 334 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 OR4P4Q8NGL7 312 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 VN1R17PQ8TDU5 208 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 OR1E3Q8WZA6 343 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 APH1AQ96BI3 265 aa4.28□□□□□ -1.72
GMDS-207ENST00000530459 RPUSD4Q96CM3 377 aaKnown RBP4.28□□□□□ -1.72
GMDS-207ENST00000530459 KLHDC7BQ96G42 594 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms