RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 IGKV1-12A0A0C4DH73 117 aa10.62□□□□□ -0.71
SCN3B-206ENST00000530277 PPP5D1E7EU14 171 aa10.62□□□□□ -0.71
SCN3B-206ENST00000530277 RPL36A-HNRNPH2H7BZ11 118 aa10.62□□□□□ -0.71
SCN3B-206ENST00000530277 IGKV1D-12P01611 117 aa10.62□□□□□ -0.71
SCN3B-206ENST00000530277 MT-ND4LP03901 98 aa10.62□□□□□ -0.71
SCN3B-206ENST00000530277 SURF2Q15527 256 aaPredicted RBP10.62□□□□□ -0.71
SCN3B-206ENST00000530277 SAMD10Q9BYL1 202 aa10.62□□□□□ -0.71
SCN3B-206ENST00000530277 ZNF107Q9UII5 783 aaPredicted RBP10.62□□□□□ -0.71
SCN3B-206ENST00000530277 TMEM30CPA0ZSE6 113 aa10.62□□□□□ -0.71
SCN3B-206ENST00000530277 CRYM-AS1A6NIL9 109 aa10.62□□□□□ -0.71
SCN3B-206ENST00000530277 M0R296 226 aa10.62□□□□□ -0.71
SCN3B-206ENST00000530277 CYTIPO60759 359 aa10.62□□□□□ -0.71
SCN3B-206ENST00000530277 CD8AP01732 235 aa10.62□□□□□ -0.71
SCN3B-206ENST00000530277 HTD2P86397 168 aa10.62□□□□□ -0.71
SCN3B-206ENST00000530277 IL13RA2Q14627 380 aa10.62□□□□□ -0.71
SCN3B-206ENST00000530277 FBXW9Q5XUX1 488 aa10.62□□□□□ -0.71
SCN3B-206ENST00000530277 POC1AQ8NBT0 407 aa10.62□□□□□ -0.71
SCN3B-206ENST00000530277 OR1L1Q8NH94 360 aa10.62□□□□□ -0.71
SCN3B-206ENST00000530277 SAT2Q96F10 170 aaPredicted RBP10.62□□□□□ -0.71
SCN3B-206ENST00000530277 DMRTA2Q96SC8 542 aa10.62□□□□□ -0.71
SCN3B-206ENST00000530277 TUBG2Q9NRH3 451 aa10.62□□□□□ -0.71
SCN3B-206ENST00000530277 RALYQ9UKM9 306 aaKnown RBP10.62□□□□□ -0.71
SCN3B-206ENST00000530277 ATP23Q9Y6H3 246 aa10.62□□□□□ -0.71
SCN3B-206ENST00000530277 VPS13AQ96RL7 3174 aa10.62□□□□□ -0.71
SCN3B-206ENST00000530277 DTYMKP23919 212 aa10.62□□□□□ -0.71
SCN3B-206ENST00000530277 B2MP61769 119 aa10.62□□□□□ -0.71
SCN3B-206ENST00000530277 GNB1P62873 340 aa10.62□□□□□ -0.71
SCN3B-206ENST00000530277 ZNF561Q8N587 486 aa10.62□□□□□ -0.71
SCN3B-206ENST00000530277 CCL17Q92583 94 aa10.62□□□□□ -0.71
SCN3B-206ENST00000530277 OR2W1Q9Y3N9 320 aa10.62□□□□□ -0.71
SCN3B-206ENST00000530277 LAMA1P25391 3075 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 EGR1P18146 543 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 TMEM41BQ5BJD5 291 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 NCR3LG1Q68D85 454 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 C17orf82Q86X59 251 aaPredicted RBP10.61□□□□□ -0.71
SCN3B-206ENST00000530277 VKORC1L1Q8N0U8 176 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 ZIC4Q8N9L1 334 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 ACY3Q96HD9 319 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 S1PR3Q99500 378 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 DCTN5Q9BTE1 182 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 TMPRSS5Q9H3S3 457 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 MTCH1Q9NZJ7 389 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 CELSR3Q9NYQ7 3312 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 HAND1O96004 215 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 CD200P41217 278 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 RAB5CP51148 216 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 DHODHQ02127 395 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 SMIM21Q3B7S5 101 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 TMEM211Q6ICI0 200 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 ZNF343Q6P1L6 599 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 MOGAT3Q86VF5 341 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 C1orf87Q8N0U7 546 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 V9GYS6 101 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 C2orf16Q68DN1 1984 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 IGLV3-12A0A075B6K2 115 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 A0A1W2PRD5 423 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 A0A1W2PRF3 423 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 A0A1W2PRM7 423 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 H3BQ15 152 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 TMEM11P17152 192 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 PTGDSP41222 190 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 REG1BP48304 166 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 SUPT4H1P63272 117 aaKnown RBP10.61□□□□□ -0.71
SCN3B-206ENST00000530277 DLK1P80370 383 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 FAM201AQ5SY85 155 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 PRR27Q6MZM9 219 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 RND1Q92730 232 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 NTNG2Q96CW9 530 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 TMEM68Q96MH6 324 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 ZPBPQ9BS86 351 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 SEC11CQ9BY50 192 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 DECR2Q9NUI1 292 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 DOK5Q9P104 306 aa10.61□□□□□ -0.71
SCN3B-206ENST00000530277 IGKV1-27A0A075B6S5 117 aa10.6□□□□□ -0.71
SCN3B-206ENST00000530277 IGKV1D-13A0A0B4J2D9 117 aa10.6□□□□□ -0.71
SCN3B-206ENST00000530277 A8MXK9 166 aa10.6□□□□□ -0.71
SCN3B-206ENST00000530277 SYNGR3O43761 229 aa10.6□□□□□ -0.71
SCN3B-206ENST00000530277 IGKV1-13P0DP09 117 aa10.6□□□□□ -0.71
SCN3B-206ENST00000530277 OR13D1Q8NGV5 346 aa10.6□□□□□ -0.71
SCN3B-206ENST00000530277 TPPP3Q9BW30 176 aa10.6□□□□□ -0.71
SCN3B-206ENST00000530277 PTPRQQ9UMZ3 2332 aa10.6□□□□□ -0.71
SCN3B-206ENST00000530277 OR2H2O95918 312 aa10.6□□□□□ -0.71
SCN3B-206ENST00000530277 F2RP25116 425 aa10.6□□□□□ -0.71
SCN3B-206ENST00000530277 P2RY1P47900 373 aa10.6□□□□□ -0.71
SCN3B-206ENST00000530277 FAM166AQ6J272 317 aa10.6□□□□□ -0.71
SCN3B-206ENST00000530277 SNX22Q96L94 193 aa10.6□□□□□ -0.71
SCN3B-206ENST00000530277 LRFN3Q9BTN0 628 aa10.6□□□□□ -0.71
SCN3B-206ENST00000530277 OPN3Q9H1Y3 402 aaPredicted RBP10.6□□□□□ -0.71
SCN3B-206ENST00000530277 DLL3Q9NYJ7 618 aa10.6□□□□□ -0.71
SCN3B-206ENST00000530277 EIF2S3P41091 472 aaKnown RBP10.6□□□□□ -0.71
SCN3B-206ENST00000530277 SULT1A2P50226 295 aa10.6□□□□□ -0.71
SCN3B-206ENST00000530277 CCL8P80075 99 aa10.6□□□□□ -0.71
SCN3B-206ENST00000530277 HGFACQ04756 655 aa10.6□□□□□ -0.71
SCN3B-206ENST00000530277 CEACAM21Q3KPI0 293 aa10.6□□□□□ -0.71
SCN3B-206ENST00000530277 OR5A2Q8NGI9 324 aa10.6□□□□□ -0.71
SCN3B-206ENST00000530277 CHRNA10Q9GZZ6 450 aa10.6□□□□□ -0.71
SCN3B-206ENST00000530277 POMT1Q9Y6A1 747 aa10.6□□□□□ -0.71
SCN3B-206ENST00000530277 TANC1Q9C0D5 1861 aa10.6□□□□□ -0.71
SCN3B-206ENST00000530277 ARFGEF3Q5TH69 2177 aa10.6□□□□□ -0.71
SCN3B-206ENST00000530277 MDFIC2A0A1B0GVS7 189 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms