RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	SULT1A1	P50225	295 aa		12.35	□□□□□ -0.43
NR1H3-231	ENST00000529540	POLR2G	P62487	172 aa	Known RBP eCLIP	12.35	□□□□□ -0.43
NR1H3-231	ENST00000529540	ZNF92	Q03936	586 aa		12.35	□□□□□ -0.43
NR1H3-231	ENST00000529540	CLINT1	Q14677	625 aa		12.35	□□□□□ -0.43
NR1H3-231	ENST00000529540	DAZAP2	Q15038	168 aa	Predicted RBP	12.35	□□□□□ -0.43
NR1H3-231	ENST00000529540	MEX3B	Q6ZN04	569 aa	Known RBP	12.35	□□□□□ -0.43
NR1H3-231	ENST00000529540	LIAT1	Q6ZQX7	453 aa		12.35	□□□□□ -0.43
NR1H3-231	ENST00000529540	C6orf201	Q7Z4U5	140 aa		12.35	□□□□□ -0.43
NR1H3-231	ENST00000529540	OR2AE1	Q8NHA4	323 aa		12.35	□□□□□ -0.43
NR1H3-231	ENST00000529540	SLC25A40	Q8TBP6	338 aa		12.35	□□□□□ -0.43
NR1H3-231	ENST00000529540	MARS2	Q96GW9	593 aa	Known RBP	12.35	□□□□□ -0.43
NR1H3-231	ENST00000529540	OR2J1	Q9GZK6	312 aa		12.35	□□□□□ -0.43
NR1H3-231	ENST00000529540	PLEKHJ1	Q9NW61	149 aa		12.35	□□□□□ -0.43
NR1H3-231	ENST00000529540	SCGB1D2	O95969	90 aa		12.34	□□□□□ -0.43
NR1H3-231	ENST00000529540	CHAT	P28329	748 aa		12.34	□□□□□ -0.43
NR1H3-231	ENST00000529540	DUSP1	P28562	367 aa		12.34	□□□□□ -0.43
NR1H3-231	ENST00000529540	UCP3	P55916	312 aa		12.34	□□□□□ -0.43
NR1H3-231	ENST00000529540	PIGP	P57054	158 aa		12.34	□□□□□ -0.43
NR1H3-231	ENST00000529540	SRSF1	Q07955	248 aa	Known RBP eCLIP	12.34	□□□□□ -0.43
NR1H3-231	ENST00000529540	ZNF616	Q08AN1	781 aa		12.34	□□□□□ -0.43
NR1H3-231	ENST00000529540	KRBOX4	Q5JUW0	171 aa		12.34	□□□□□ -0.43
NR1H3-231	ENST00000529540	FAM209B	Q5JX69	171 aa		12.34	□□□□□ -0.43
NR1H3-231	ENST00000529540	KLF14	Q8TD94	323 aa	Predicted RBP	12.34	□□□□□ -0.43
NR1H3-231	ENST00000529540	SPSB1	Q96BD6	273 aa		12.34	□□□□□ -0.43
NR1H3-231	ENST00000529540	OR51B6	Q9H340	312 aa		12.34	□□□□□ -0.43
NR1H3-231	ENST00000529540	TMPRSS5	Q9H3S3	457 aa		12.34	□□□□□ -0.43
NR1H3-231	ENST00000529540	ZDHHC8	Q9ULC8	765 aa		12.34	□□□□□ -0.43
NR1H3-231	ENST00000529540	DEFB108A	A8MXU0	73 aa		12.33	□□□□□ -0.44
NR1H3-231	ENST00000529540	CLN5	O75503	358 aa		12.33	□□□□□ -0.44
NR1H3-231	ENST00000529540	IFNA17	P01571	189 aa		12.33	□□□□□ -0.44
NR1H3-231	ENST00000529540	TMEM225B	P0DP42	221 aa		12.33	□□□□□ -0.44
NR1H3-231	ENST00000529540	FAH	P16930	419 aa		12.33	□□□□□ -0.44
NR1H3-231	ENST00000529540	LGI3	Q8N145	548 aa		12.33	□□□□□ -0.44
NR1H3-231	ENST00000529540	LINC00469	Q8N7U9	141 aa		12.33	□□□□□ -0.44
NR1H3-231	ENST00000529540	NPRL2	Q8WTW4	380 aa		12.33	□□□□□ -0.44
NR1H3-231	ENST00000529540	EIF5A2	Q9GZV4	153 aa	Known RBP	12.33	□□□□□ -0.44
NR1H3-231	ENST00000529540	METTL9	Q9H1A3	318 aa		12.33	□□□□□ -0.44
NR1H3-231	ENST00000529540	PIGL	Q9Y2B2	252 aa		12.33	□□□□□ -0.44
NR1H3-231	ENST00000529540	ATP23	Q9Y6H3	246 aa		12.33	□□□□□ -0.44
NR1H3-231	ENST00000529540	UBR5	O95071	2799 aa	Predicted RBP	12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540	ZNF816-ZNF321P	A0A0X1KG74	233 aa		12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540	hCG_1809904	A0A1W2PP81	198 aa		12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540		A0A1W2PR64	198 aa		12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540		A0A1W2PRV1	198 aa		12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540	ANKRD30BL	A7E2S9	258 aa		12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540	CD300LB	A8K4G0	201 aa		12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540	C19orf84	I3L1E1	186 aa		12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540	PPIH	O43447	177 aa	Known RBP	12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540	OR5AC1	P0C628	307 aa		12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540	KITLG	P21583	273 aa		12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540	GABRR1	P24046	479 aa		12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540	KLF3	P57682	345 aa	Predicted RBP	12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540	ABCA11P	Q4W5N1	156 aa		12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540	ADAM5	Q6NVV9	412 aa		12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540	ASCL4	Q6XD76	172 aa		12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540	TMEM171	Q8WVE6	324 aa		12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540	PIGT	Q969N2	578 aa		12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540	ISOC2	Q96AB3	205 aa		12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540	MSI2	Q96DH6	328 aa	Known RBP	12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540	HDHD3	Q9BSH5	251 aa	Predicted RBP	12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540	TMEM204	Q9BSN7	226 aa		12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540	LIME1	Q9H400	295 aa		12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540	C11orf1	Q9H5F2	150 aa		12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540	AK3	Q9UIJ7	227 aa		12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540	DOPEY1	Q5JWR5	2465 aa		12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540	IQCF6	A8MYZ5	107 aa		12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540	SHISA9	B4DS77	424 aa		12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540	ST8SIA3	O43173	380 aa		12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540	IGHV2-70	P01814	119 aa		12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540	FBP1	P09467	338 aa		12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540	SPATA46	Q5T0L3	261 aa		12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540	OR4D5	Q8NGN0	318 aa		12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540	PARP12	Q9H0J9	701 aa	Known RBP	12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540	ELL3	Q9HB65	397 aa	Predicted RBP	12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540	MIOX	Q9UGB7	285 aa		12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540	RCL1	Q9Y2P8	373 aa	Known RBP	12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540	MPC1	Q9Y5U8	109 aa		12.32	□□□□□ -0.44
NR1H3-231	ENST00000529540	IGLV3-9	A0A075B6K5	115 aa		12.31	□□□□□ -0.44
NR1H3-231	ENST00000529540	BTBD17	A6NE02	478 aa		12.31	□□□□□ -0.44
NR1H3-231	ENST00000529540		A6NNC1	897 aa		12.31	□□□□□ -0.44
NR1H3-231	ENST00000529540	GATC	O43716	136 aa	Known RBP	12.31	□□□□□ -0.44
NR1H3-231	ENST00000529540	TIMM8A	O60220	97 aa	Predicted RBP	12.31	□□□□□ -0.44
NR1H3-231	ENST00000529540	IGHV3-13	P01766	116 aa		12.31	□□□□□ -0.44
NR1H3-231	ENST00000529540	PRH1	P02810	166 aa		12.31	□□□□□ -0.44
NR1H3-231	ENST00000529540	RNF224	P0DH78	156 aa		12.31	□□□□□ -0.44
NR1H3-231	ENST00000529540	CNN3	Q15417	329 aa	Known RBP	12.31	□□□□□ -0.44
NR1H3-231	ENST00000529540	HEPN1	Q6WQI6	88 aa		12.31	□□□□□ -0.44
NR1H3-231	ENST00000529540	LYZL2	Q7Z4W2	148 aa		12.31	□□□□□ -0.44
NR1H3-231	ENST00000529540	FAM24B	Q8N5W8	94 aa		12.31	□□□□□ -0.44
NR1H3-231	ENST00000529540	ZNF565	Q8N9K5	539 aa		12.31	□□□□□ -0.44
NR1H3-231	ENST00000529540	CCDC71L	Q8N9Z2	235 aa		12.31	□□□□□ -0.44
NR1H3-231	ENST00000529540	OR56B2P	Q8NGI1	322 aa		12.31	□□□□□ -0.44
NR1H3-231	ENST00000529540	MOB3A	Q96BX8	217 aa		12.31	□□□□□ -0.44
NR1H3-231	ENST00000529540	UNKL	Q9H9P5	680 aa	Known RBP	12.31	□□□□□ -0.44
NR1H3-231	ENST00000529540	TMED3	Q9Y3Q3	217 aa		12.31	□□□□□ -0.44
NR1H3-231	ENST00000529540	ANKHD1	Q8IWZ3	2542 aa	Known RBP	12.31	□□□□□ -0.44
NR1H3-231	ENST00000529540	MYO18B	Q8IUG5	2567 aa		12.3	□□□□□ -0.44
NR1H3-231	ENST00000529540		A0A1W2PPE2	198 aa		12.3	□□□□□ -0.44
NR1H3-231	ENST00000529540	DAO	P14920	347 aa		12.3	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms