RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 MGMTP16455 207 aa10.21□□□□□ -0.77
CPSF1-204ENST00000529288 CELP19835 753 aa10.21□□□□□ -0.77
CPSF1-204ENST00000529288 SLC6A1P30531 599 aa10.21□□□□□ -0.77
CPSF1-204ENST00000529288 SOX6P35712 828 aa10.21□□□□□ -0.77
CPSF1-204ENST00000529288 DOC2BQ14184 412 aa10.21□□□□□ -0.77
CPSF1-204ENST00000529288 NKAPLQ5M9Q1 402 aa10.21□□□□□ -0.77
CPSF1-204ENST00000529288 C8orf31Q8N9H6 132 aa10.21□□□□□ -0.77
CPSF1-204ENST00000529288 ZNF485Q8NCK3 441 aa10.21□□□□□ -0.77
CPSF1-204ENST00000529288 TMEM104Q8NE00 496 aa10.21□□□□□ -0.77
CPSF1-204ENST00000529288 ST6GALNAC6Q969X2 333 aa10.21□□□□□ -0.77
CPSF1-204ENST00000529288 CYYR1Q96J86 154 aa10.21□□□□□ -0.77
CPSF1-204ENST00000529288 PGLYRP3Q96LB9 341 aa10.21□□□□□ -0.77
CPSF1-204ENST00000529288 TAF9BQ9HBM6 251 aa10.21□□□□□ -0.77
CPSF1-204ENST00000529288 OR2S2Q9NQN1 319 aa10.21□□□□□ -0.77
CPSF1-204ENST00000529288 PLSCR3Q9NRY6 295 aa10.21□□□□□ -0.77
CPSF1-204ENST00000529288 RCC2Q9P258 522 aaKnown RBP10.21□□□□□ -0.77
CPSF1-204ENST00000529288 EFCAB10A6NFE3 127 aa10.2□□□□□ -0.78
CPSF1-204ENST00000529288 TXNL1O43396 289 aa10.2□□□□□ -0.78
CPSF1-204ENST00000529288 FSTP19883 344 aa10.2□□□□□ -0.78
CPSF1-204ENST00000529288 FUT3P21217 361 aa10.2□□□□□ -0.78
CPSF1-204ENST00000529288 LUMP51884 338 aaPredicted RBP10.2□□□□□ -0.78
CPSF1-204ENST00000529288 AQP4P55087 323 aa10.2□□□□□ -0.78
CPSF1-204ENST00000529288 TAS2R43P59537 309 aa10.2□□□□□ -0.78
CPSF1-204ENST00000529288 FOXE3Q13461 319 aa10.2□□□□□ -0.78
CPSF1-204ENST00000529288 GNMTQ14749 295 aa10.2□□□□□ -0.78
CPSF1-204ENST00000529288 AHSA2Q719I0 299 aa10.2□□□□□ -0.78
CPSF1-204ENST00000529288 ZNF439Q8NDP4 499 aa10.2□□□□□ -0.78
CPSF1-204ENST00000529288 BPIFB6Q8NFQ5 453 aa10.2□□□□□ -0.78
CPSF1-204ENST00000529288 OR8H1Q8NGG4 311 aa10.2□□□□□ -0.78
CPSF1-204ENST00000529288 OR5M8Q8NGP6 311 aa10.2□□□□□ -0.78
CPSF1-204ENST00000529288 MRPS24Q96EL2 167 aaKnown RBP10.2□□□□□ -0.78
CPSF1-204ENST00000529288 ZMAT5Q9UDW3 170 aaKnown RBP10.2□□□□□ -0.78
CPSF1-204ENST00000529288 ZNF107Q9UII5 783 aaPredicted RBP10.2□□□□□ -0.78
CPSF1-204ENST00000529288 WSB1Q9Y6I7 421 aa10.2□□□□□ -0.78
CPSF1-204ENST00000529288 ELANEP08246 267 aa10.19□□□□□ -0.78
CPSF1-204ENST00000529288 PPP1CCP36873 323 aaKnown RBP10.19□□□□□ -0.78
CPSF1-204ENST00000529288 ECI1P42126 302 aa10.19□□□□□ -0.78
CPSF1-204ENST00000529288 KIR2DS1Q14954 304 aa10.19□□□□□ -0.78
CPSF1-204ENST00000529288 MMDQ15546 238 aa10.19□□□□□ -0.78
CPSF1-204ENST00000529288 Q3ZCU0 254 aa10.19□□□□□ -0.78
CPSF1-204ENST00000529288 TRAT1Q6PIZ9 186 aa10.19□□□□□ -0.78
CPSF1-204ENST00000529288 C8orf59Q8N0T1 100 aaPredicted RBP10.19□□□□□ -0.78
CPSF1-204ENST00000529288 OR8U1Q8NH10 309 aa10.19□□□□□ -0.78
CPSF1-204ENST00000529288 SETD6Q8TBK2 473 aa10.19□□□□□ -0.78
CPSF1-204ENST00000529288 KCTD7Q96MP8 289 aa10.19□□□□□ -0.78
CPSF1-204ENST00000529288 DERL3Q96Q80 235 aa10.19□□□□□ -0.78
CPSF1-204ENST00000529288 OR5B12Q96R08 314 aa10.19□□□□□ -0.78
CPSF1-204ENST00000529288 PRR25Q96S07 402 aa10.19□□□□□ -0.78
CPSF1-204ENST00000529288 B9D2Q9BPU9 175 aa10.19□□□□□ -0.78
CPSF1-204ENST00000529288 PLCXD1Q9NUJ7 323 aa10.19□□□□□ -0.78
CPSF1-204ENST00000529288 FKBP14Q9NWM8 211 aa10.19□□□□□ -0.78
CPSF1-204ENST00000529288 PSORS1C1Q9UIG5 152 aa10.19□□□□□ -0.78
CPSF1-204ENST00000529288 SEC14L6B5MCN3 397 aa10.18□□□□□ -0.78
CPSF1-204ENST00000529288 H0YHG0 523 aa10.18□□□□□ -0.78
CPSF1-204ENST00000529288 LANCL1O43813 399 aa10.18□□□□□ -0.78
CPSF1-204ENST00000529288 PDCD6O75340 191 aa10.18□□□□□ -0.78
CPSF1-204ENST00000529288 VSIG8P0DPA2 414 aa10.18□□□□□ -0.78
CPSF1-204ENST00000529288 CDX1P47902 265 aaPredicted RBP10.18□□□□□ -0.78
CPSF1-204ENST00000529288 GP2P55259 537 aaKnown RBP10.18□□□□□ -0.78
CPSF1-204ENST00000529288 LSAMPQ13449 338 aa10.18□□□□□ -0.78
CPSF1-204ENST00000529288 TMEM30BQ3MIR4 351 aa10.18□□□□□ -0.78
CPSF1-204ENST00000529288 MORN2Q502X0 79 aa10.18□□□□□ -0.78
CPSF1-204ENST00000529288 OR10K2Q6IF99 312 aa10.18□□□□□ -0.78
CPSF1-204ENST00000529288 TMEM65Q6PI78 240 aa10.18□□□□□ -0.78
CPSF1-204ENST00000529288 CDH26Q8IXH8 852 aa10.18□□□□□ -0.78
CPSF1-204ENST00000529288 Q96M66 194 aa10.18□□□□□ -0.78
CPSF1-204ENST00000529288 NEDD4LQ96PU5 975 aa10.18□□□□□ -0.78
CPSF1-204ENST00000529288 ZNF251Q9BRH9 671 aa10.18□□□□□ -0.78
CPSF1-204ENST00000529288 ABHD14AQ9BUJ0 271 aa10.18□□□□□ -0.78
CPSF1-204ENST00000529288 MRPL20Q9BYC9 149 aaKnown RBP10.18□□□□□ -0.78
CPSF1-204ENST00000529288 CHMP1AQ9HD42 196 aaPredicted RBP10.18□□□□□ -0.78
CPSF1-204ENST00000529288 PARP11Q9NR21 331 aa10.18□□□□□ -0.78
CPSF1-204ENST00000529288 FAM90A10PA6NDY2 464 aa10.17□□□□□ -0.78
CPSF1-204ENST00000529288 FAM90A7PA6NKC0 464 aa10.17□□□□□ -0.78
CPSF1-204ENST00000529288 FAM90A23PA8MXZ1 464 aa10.17□□□□□ -0.78
CPSF1-204ENST00000529288 CA11O75493 328 aa10.17□□□□□ -0.78
CPSF1-204ENST00000529288 LY86O95711 162 aa10.17□□□□□ -0.78
CPSF1-204ENST00000529288 CNTFRP26992 372 aa10.17□□□□□ -0.78
CPSF1-204ENST00000529288 MAPK3P27361 379 aaPredicted RBP10.17□□□□□ -0.78
CPSF1-204ENST00000529288 OR3A3P47888 321 aa10.17□□□□□ -0.78
CPSF1-204ENST00000529288 WNT4P56705 351 aa10.17□□□□□ -0.78
CPSF1-204ENST00000529288 ACTBP60709 375 aa10.17□□□□□ -0.78
CPSF1-204ENST00000529288 DCTN2Q13561 401 aaKnown RBP10.17□□□□□ -0.78
CPSF1-204ENST00000529288 INSL4Q14641 139 aa10.17□□□□□ -0.78
CPSF1-204ENST00000529288 C9orf66Q5T8R8 295 aa10.17□□□□□ -0.78
CPSF1-204ENST00000529288 SIGIRRQ6IA17 410 aa10.17□□□□□ -0.78
CPSF1-204ENST00000529288 FAM71E2Q8N5Q1 922 aa10.17□□□□□ -0.78
CPSF1-204ENST00000529288 NKAIN3Q8N8D7 197 aa10.17□□□□□ -0.78
CPSF1-204ENST00000529288 OR11H1Q8NG94 326 aa10.17□□□□□ -0.78
CPSF1-204ENST00000529288 MRPL30Q8TCC3 161 aaKnown RBP10.17□□□□□ -0.78
CPSF1-204ENST00000529288 IL1F10Q8WWZ1 152 aa10.17□□□□□ -0.78
CPSF1-204ENST00000529288 RITA1Q96K30 269 aa10.17□□□□□ -0.78
CPSF1-204ENST00000529288 FAAP24Q9BTP7 215 aa10.17□□□□□ -0.78
CPSF1-204ENST00000529288 TMED9Q9BVK6 235 aa10.17□□□□□ -0.78
CPSF1-204ENST00000529288 CST11Q9H112 138 aa10.17□□□□□ -0.78
CPSF1-204ENST00000529288 VCXQ9H320 206 aa10.17□□□□□ -0.78
CPSF1-204ENST00000529288 CNOT2Q9NZN8 540 aaKnown RBP10.17□□□□□ -0.78
CPSF1-204ENST00000529288 ERGIC3Q9Y282 383 aa10.17□□□□□ -0.78
CPSF1-204ENST00000529288 DNAH9Q9NYC9 4486 aa10.16□□□□□ -0.78
CPSF1-204ENST00000529288 G3V318 75 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms