RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 MMP9P14780 707 aa6.31□□□□□ -1.4
CTNND1-218ENST00000528232 AREGP15514 252 aa6.31□□□□□ -1.4
CTNND1-218ENST00000528232 MUC1P15941 1255 aaPredicted RBP6.31□□□□□ -1.4
CTNND1-218ENST00000528232 CXCL3P19876 107 aa6.31□□□□□ -1.4
CTNND1-218ENST00000528232 CEACAM6P40199 344 aa6.31□□□□□ -1.4
CTNND1-218ENST00000528232 TMEM33P57088 247 aa6.31□□□□□ -1.4
CTNND1-218ENST00000528232 CD200R1LQ6Q8B3 271 aa6.31□□□□□ -1.4
CTNND1-218ENST00000528232 WDFY1Q8IWB7 410 aa6.31□□□□□ -1.4
CTNND1-218ENST00000528232 DEFB108BQ8NET1 73 aa6.31□□□□□ -1.4
CTNND1-218ENST00000528232 OR13C6PQ8NH95 151 aa6.31□□□□□ -1.4
CTNND1-218ENST00000528232 GTF3AQ92664 365 aaKnown RBP6.31□□□□□ -1.4
CTNND1-218ENST00000528232 PPP1R3EQ9H7J1 279 aa6.31□□□□□ -1.4
CTNND1-218ENST00000528232 SRD5A3Q9H8P0 318 aa6.31□□□□□ -1.4
CTNND1-218ENST00000528232 TMEM38BQ9NVV0 291 aa6.31□□□□□ -1.4
CTNND1-218ENST00000528232 TRBV5-5A0A0J9YX44 114 aa6.31□□□□□ -1.4
CTNND1-218ENST00000528232 COMPP49747 757 aaPredicted RBP6.31□□□□□ -1.4
CTNND1-218ENST00000528232 DEFB124Q8NES8 71 aa6.31□□□□□ -1.4
CTNND1-218ENST00000528232 OR2Z1Q8NG97 314 aa6.31□□□□□ -1.4
CTNND1-218ENST00000528232 SFRP2Q96HF1 295 aa6.31□□□□□ -1.4
CTNND1-218ENST00000528232 HSPB9Q9BQS6 159 aa6.31□□□□□ -1.4
CTNND1-218ENST00000528232 AAMDCQ9H7C9 122 aa6.31□□□□□ -1.4
CTNND1-218ENST00000528232 HLA-DQA1P01909 254 aa6.31□□□□□ -1.4
CTNND1-218ENST00000528232 NANOS3P60323 173 aaKnown RBP6.31□□□□□ -1.4
CTNND1-218ENST00000528232 IFITM3Q01628 133 aa6.31□□□□□ -1.4
CTNND1-218ENST00000528232 SP6Q3SY56 376 aa6.31□□□□□ -1.4
CTNND1-218ENST00000528232 LINC00596Q86U02 117 aa6.31□□□□□ -1.4
CTNND1-218ENST00000528232 RAB37Q96AX2 223 aa6.31□□□□□ -1.4
CTNND1-218ENST00000528232 CTHRC1Q96CG8 243 aa6.31□□□□□ -1.4
CTNND1-218ENST00000528232 ABHD14BQ96IU4 210 aa6.31□□□□□ -1.4
CTNND1-218ENST00000528232 WFDC6Q9BQY6 131 aa6.31□□□□□ -1.4
CTNND1-218ENST00000528232 LIPGQ9Y5X9 500 aa6.31□□□□□ -1.4
CTNND1-218ENST00000528232 DNASE2O00115 360 aaPredicted RBP6.3□□□□□ -1.4
CTNND1-218ENST00000528232 SOCS1O15524 211 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 HBZP02008 142 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 TRGC2P03986 189 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 BCL3P20749 454 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 S100A4P26447 101 aaKnown RBP6.3□□□□□ -1.4
CTNND1-218ENST00000528232 STARD6P59095 220 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 PDCD1Q15116 288 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 GFRALQ6UXV0 394 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 TGIF2LYQ8IUE0 185 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 OR10AC1Q8NH08 325 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 ADAT3Q96EY9 351 aaPredicted RBP6.3□□□□□ -1.4
CTNND1-218ENST00000528232 POM121L2Q96KW2 1035 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 CHST5Q9GZS9 411 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 SAP30LQ9HAJ7 183 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 ANXA10Q9UJ72 324 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 CHD5Q8TDI0 1954 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 IGHV1-45A0A0A0MS14 117 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 M0QZ24 198 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 ALKBH6Q3KRA9 238 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 RFLNBQ8N5W9 214 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 FAM181AQ8N9Y4 354 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 ERRFI1Q9UJM3 462 aaPredicted RBP6.3□□□□□ -1.4
CTNND1-218ENST00000528232 TRAV9-1A0A075B6T8 112 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 LMX1BO60663 402 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 CXCL2P19875 107 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 OR2V2Q96R30 315 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 MRPL13Q9BYD1 178 aaKnown RBP6.3□□□□□ -1.4
CTNND1-218ENST00000528232 SMOC1Q9H4F8 434 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 R4GN57 208 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 ZNF646O15015 1829 aaPredicted RBP6.3□□□□□ -1.4
CTNND1-218ENST00000528232 SPRY3O43610 288 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 LANCL1O43813 399 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 ONECUT2O95948 504 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 APCSP02743 223 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 PATE4P0C8F1 98 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 MAGEA5P43359 124 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 GLIPR1P48060 266 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 RHOBP62745 196 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 LCN2P80188 198 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 LRRC10Q5BKY1 277 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 LAIR2Q6ISS4 152 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 TUSC5Q8IXB3 177 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 MRGPRDQ8TDS7 321 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 PGLYRP3Q96LB9 341 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 ZNF48Q96MX3 618 aaPredicted RBP6.3□□□□□ -1.4
CTNND1-218ENST00000528232 TMEM147Q9BVK8 224 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 TINAGQ9UJW2 476 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 SCN3AQ9NY46 2000 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 MEX3AA1L020 520 aaKnown RBP6.3□□□□□ -1.4
CTNND1-218ENST00000528232 VSIG8P0DPA2 414 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 PRRX1P54821 245 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 FBLN7Q53RD9 439 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 CRIPAKQ8N1N5 446 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 POC1AQ8NBT0 407 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 OR5D13Q8NGL4 314 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 OR4C12Q96R67 309 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 ANAPC13Q9BS18 74 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 OR2D2Q9H210 308 aa6.3□□□□□ -1.4
CTNND1-218ENST00000528232 A0A1W2PPC1 479 aa6.29□□□□□ -1.4
CTNND1-218ENST00000528232 OR2T8A6NH00 312 aa6.29□□□□□ -1.4
CTNND1-218ENST00000528232 ZNF785A8K8V0 405 aa6.29□□□□□ -1.4
CTNND1-218ENST00000528232 NEURL1O76050 574 aa6.29□□□□□ -1.4
CTNND1-218ENST00000528232 LPAR6P43657 344 aa6.29□□□□□ -1.4
CTNND1-218ENST00000528232 MGAT2Q10469 447 aa6.29□□□□□ -1.4
CTNND1-218ENST00000528232 MRPL54Q6P161 138 aaKnown RBP6.29□□□□□ -1.4
CTNND1-218ENST00000528232 OR10S1Q8NGN2 331 aa6.29□□□□□ -1.4
CTNND1-218ENST00000528232 DERL1Q9BUN8 251 aa6.29□□□□□ -1.4
CTNND1-218ENST00000528232 CHRNA10Q9GZZ6 450 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms