RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 KIR2DL5BA0A0G2JN68 375 aa12.52□□□□□ -0.4
CAPN1-214ENST00000528165 KIR2DL5BA0A0G2JPC4 375 aa12.52□□□□□ -0.4
CAPN1-214ENST00000528165 TYMSP04818 313 aa12.52□□□□□ -0.4
CAPN1-214ENST00000528165 RPL29P47914 159 aaKnown RBP12.52□□□□□ -0.4
CAPN1-214ENST00000528165 HNRNPKP61978 463 aaKnown RBP eCLIP12.52□□□□□ -0.4
CAPN1-214ENST00000528165 PRSS8Q16651 343 aa12.52□□□□□ -0.4
CAPN1-214ENST00000528165 DCAF10Q5QP82 559 aa12.52□□□□□ -0.4
CAPN1-214ENST00000528165 RAET1LQ5VY80 246 aa12.52□□□□□ -0.4
CAPN1-214ENST00000528165 Q6ZRM9 215 aa12.52□□□□□ -0.4
CAPN1-214ENST00000528165 HAPLN4Q86UW8 402 aa12.52□□□□□ -0.4
CAPN1-214ENST00000528165 KIR2DL5AQ8N109 375 aa12.52□□□□□ -0.4
CAPN1-214ENST00000528165 OR4F5Q8NH21 305 aa12.52□□□□□ -0.4
CAPN1-214ENST00000528165 OR4C12Q96R67 309 aa12.52□□□□□ -0.4
CAPN1-214ENST00000528165 OR4F4Q96R69 305 aa12.52□□□□□ -0.4
CAPN1-214ENST00000528165 NAGKQ9UJ70 344 aa12.52□□□□□ -0.4
CAPN1-214ENST00000528165 RANBP2P49792 3224 aaKnown RBP12.52□□□□□ -0.4
CAPN1-214ENST00000528165 UBE2L5PA0A1B0GUS4 154 aa12.52□□□□□ -0.41
CAPN1-214ENST00000528165 M0QZK8 103 aa12.52□□□□□ -0.41
CAPN1-214ENST00000528165 HMGB3O15347 200 aaKnown RBP12.52□□□□□ -0.41
CAPN1-214ENST00000528165 GYPAP02724 150 aa12.52□□□□□ -0.41
CAPN1-214ENST00000528165 B4GALT1P15291 398 aa12.52□□□□□ -0.41
CAPN1-214ENST00000528165 BCL3P20749 454 aa12.52□□□□□ -0.41
CAPN1-214ENST00000528165 Q6ZS52 159 aa12.52□□□□□ -0.41
CAPN1-214ENST00000528165 C7orf61Q8IZ16 206 aa12.52□□□□□ -0.41
CAPN1-214ENST00000528165 RPP25LQ8N5L8 163 aaKnown RBP12.52□□□□□ -0.41
CAPN1-214ENST00000528165 DEFB126Q9BYW3 111 aa12.52□□□□□ -0.41
CAPN1-214ENST00000528165 GOLT1BQ9Y3E0 138 aa12.52□□□□□ -0.41
CAPN1-214ENST00000528165 ATP23Q9Y6H3 246 aa12.52□□□□□ -0.41
CAPN1-214ENST00000528165 OR6C6A6NF89 314 aa12.52□□□□□ -0.41
CAPN1-214ENST00000528165 OR10J1P30954 320 aa12.52□□□□□ -0.41
CAPN1-214ENST00000528165 ZIC4Q8N9L1 334 aa12.52□□□□□ -0.41
CAPN1-214ENST00000528165 TAF15Q92804 592 aaKnown RBP eCLIP12.52□□□□□ -0.41
CAPN1-214ENST00000528165 IFNL4K9M1U5 179 aa12.51□□□□□ -0.41
CAPN1-214ENST00000528165 TP53I11O14683 189 aa12.51□□□□□ -0.41
CAPN1-214ENST00000528165 RPLP1P05386 114 aaKnown RBP12.51□□□□□ -0.41
CAPN1-214ENST00000528165 SPANXN5Q5MJ07 72 aa12.51□□□□□ -0.41
CAPN1-214ENST00000528165 ZNF705AQ6ZN79 300 aaPredicted RBP12.51□□□□□ -0.41
CAPN1-214ENST00000528165 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.51□□□□□ -0.41
CAPN1-214ENST00000528165 TMEM208Q9BTX3 173 aa12.51□□□□□ -0.41
CAPN1-214ENST00000528165 IL17BQ9UHF5 180 aa12.51□□□□□ -0.41
CAPN1-214ENST00000528165 CBY1Q9Y3M2 126 aa12.51□□□□□ -0.41
CAPN1-214ENST00000528165 A0A1W2PR77 199 aa12.51□□□□□ -0.41
CAPN1-214ENST00000528165 ZNF705FA8MVS1 300 aaPredicted RBP12.51□□□□□ -0.41
CAPN1-214ENST00000528165 DLEU1O43261 78 aa12.51□□□□□ -0.41
CAPN1-214ENST00000528165 IGKV1D-33P01593 117 aa12.51□□□□□ -0.41
CAPN1-214ENST00000528165 IGKV1-33P01594 117 aa12.51□□□□□ -0.41
CAPN1-214ENST00000528165 ZNF705DP0CH99 300 aaPredicted RBP12.51□□□□□ -0.41
CAPN1-214ENST00000528165 ZNF705BP0CI00 300 aaPredicted RBP12.51□□□□□ -0.41
CAPN1-214ENST00000528165 HYAL1Q12794 435 aa12.51□□□□□ -0.41
CAPN1-214ENST00000528165 KMT5CQ86Y97 462 aa12.51□□□□□ -0.41
CAPN1-214ENST00000528165 PARD6GQ9BYG4 376 aaPredicted RBP12.51□□□□□ -0.41
CAPN1-214ENST00000528165 SLC25A22Q9H936 323 aa12.51□□□□□ -0.41
CAPN1-214ENST00000528165 TMEM38BQ9NVV0 291 aa12.51□□□□□ -0.41
CAPN1-214ENST00000528165 CHCHD2Q9Y6H1 151 aaPredicted RBP12.51□□□□□ -0.41
CAPN1-214ENST00000528165 ASCC3Q8N3C0 2202 aaKnown RBP12.5□□□□□ -0.41
CAPN1-214ENST00000528165 CD27P26842 260 aa12.5□□□□□ -0.41
CAPN1-214ENST00000528165 OR3A1P47881 315 aa12.5□□□□□ -0.41
CAPN1-214ENST00000528165 PSG4Q00888 419 aa12.5□□□□□ -0.41
CAPN1-214ENST00000528165 BTNL3Q6UXE8 466 aa12.5□□□□□ -0.41
CAPN1-214ENST00000528165 RABEPKQ7Z6M1 372 aa12.5□□□□□ -0.41
CAPN1-214ENST00000528165 OR5T1Q8NG75 326 aa12.5□□□□□ -0.41
CAPN1-214ENST00000528165 MS4A10Q96PG2 267 aa12.5□□□□□ -0.41
CAPN1-214ENST00000528165 SEMA5BQ9P283 1151 aa12.5□□□□□ -0.41
CAPN1-214ENST00000528165 OR2W1Q9Y3N9 320 aa12.5□□□□□ -0.41
CAPN1-214ENST00000528165 MYF5P13349 255 aa12.5□□□□□ -0.41
CAPN1-214ENST00000528165 LCN2P80188 198 aa12.5□□□□□ -0.41
CAPN1-214ENST00000528165 SLC38A11Q08AI6 406 aa12.5□□□□□ -0.41
CAPN1-214ENST00000528165 LSM10Q969L4 123 aaKnown RBP12.5□□□□□ -0.41
CAPN1-214ENST00000528165 MANBALQ9NQG1 85 aa12.5□□□□□ -0.41
CAPN1-214ENST00000528165 TRAPPC1Q9Y5R8 145 aa12.5□□□□□ -0.41
CAPN1-214ENST00000528165 TNFSF11O14788 317 aa12.49□□□□□ -0.41
CAPN1-214ENST00000528165 FGF12P61328 243 aa12.49□□□□□ -0.41
CAPN1-214ENST00000528165 Q8NFD4 153 aa12.49□□□□□ -0.41
CAPN1-214ENST00000528165 OR1K1Q8NGR3 316 aa12.49□□□□□ -0.41
CAPN1-214ENST00000528165 OR10J5Q8NHC4 309 aa12.49□□□□□ -0.41
CAPN1-214ENST00000528165 VENTXO95231 258 aa12.49□□□□□ -0.41
CAPN1-214ENST00000528165 PDGFBP01127 241 aaPredicted RBP12.49□□□□□ -0.41
CAPN1-214ENST00000528165 CHRNA7P36544 502 aa12.49□□□□□ -0.41
CAPN1-214ENST00000528165 KRTAP27-1Q3LI81 207 aa12.49□□□□□ -0.41
CAPN1-214ENST00000528165 FAM78BQ5VT40 261 aa12.49□□□□□ -0.41
CAPN1-214ENST00000528165 OR8G2PQ6IF36 304 aa12.49□□□□□ -0.41
CAPN1-214ENST00000528165 PCSK4Q6UW60 755 aa12.49□□□□□ -0.41
CAPN1-214ENST00000528165 ZNF573Q86YE8 665 aa12.49□□□□□ -0.41
CAPN1-214ENST00000528165 CLDN23Q96B33 292 aa12.49□□□□□ -0.41
CAPN1-214ENST00000528165 ALKBH3Q96Q83 286 aaPredicted RBP12.49□□□□□ -0.41
CAPN1-214ENST00000528165 TBX15Q96SF7 602 aa12.49□□□□□ -0.41
CAPN1-214ENST00000528165 ERRFI1Q9UJM3 462 aaPredicted RBP12.49□□□□□ -0.41
CAPN1-214ENST00000528165 TIMM9Q9Y5J7 89 aa12.49□□□□□ -0.41
CAPN1-214ENST00000528165 CTXND1A0A1B0GTU2 59 aa12.48□□□□□ -0.41
CAPN1-214ENST00000528165 HPRT1P00492 218 aa12.48□□□□□ -0.41
CAPN1-214ENST00000528165 ZNF468Q5VIY5 522 aaPredicted RBP12.48□□□□□ -0.41
CAPN1-214ENST00000528165 TMEM256Q8N2U0 113 aa12.48□□□□□ -0.41
CAPN1-214ENST00000528165 GATAD1Q8WUU5 269 aa12.48□□□□□ -0.41
CAPN1-214ENST00000528165 HS3ST6Q96QI5 342 aa12.48□□□□□ -0.41
CAPN1-214ENST00000528165 OR2H1Q9GZK4 316 aa12.48□□□□□ -0.41
CAPN1-214ENST00000528165 IL36RNQ9UBH0 155 aa12.48□□□□□ -0.41
CAPN1-214ENST00000528165 DKK1O94907 266 aa12.48□□□□□ -0.41
CAPN1-214ENST00000528165 IL3RAP26951 378 aa12.48□□□□□ -0.41
CAPN1-214ENST00000528165 WNT5AP41221 380 aa12.48□□□□□ -0.41
CAPN1-214ENST00000528165 ZNF324BQ6AW86 544 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms