RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 VSIG8P0DPA2 414 aa17.54■□□□□ 0.4
TRAPPC4-208ENST00000527680 SLC2A2P11168 524 aaPredicted RBP17.54■□□□□ 0.4
TRAPPC4-208ENST00000527680 MGMTP16455 207 aa17.54■□□□□ 0.4
TRAPPC4-208ENST00000527680 FUT3P21217 361 aa17.54■□□□□ 0.4
TRAPPC4-208ENST00000527680 VHLP40337 213 aa17.54■□□□□ 0.4
TRAPPC4-208ENST00000527680 ST3GAL4Q11206 333 aa17.54■□□□□ 0.4
TRAPPC4-208ENST00000527680 C9orf66Q5T8R8 295 aa17.54■□□□□ 0.4
TRAPPC4-208ENST00000527680 ZNF439Q8NDP4 499 aa17.54■□□□□ 0.4
TRAPPC4-208ENST00000527680 GGHQ92820 318 aa17.54■□□□□ 0.4
TRAPPC4-208ENST00000527680 PGLYRP3Q96LB9 341 aa17.54■□□□□ 0.4
TRAPPC4-208ENST00000527680 WWC2-AS2Q96NR7 200 aa17.54■□□□□ 0.4
TRAPPC4-208ENST00000527680 TAF9BQ9HBM6 251 aa17.54■□□□□ 0.4
TRAPPC4-208ENST00000527680 COL7A1Q02388 2944 aa17.54■□□□□ 0.4
TRAPPC4-208ENST00000527680 TRBV5-7A0A0A0MS05 114 aa17.53■□□□□ 0.4
TRAPPC4-208ENST00000527680 CA11O75493 328 aa17.53■□□□□ 0.4
TRAPPC4-208ENST00000527680 FSTP19883 344 aa17.53■□□□□ 0.4
TRAPPC4-208ENST00000527680 MYF6P23409 242 aa17.53■□□□□ 0.4
TRAPPC4-208ENST00000527680 LUMP51884 338 aaPredicted RBP17.53■□□□□ 0.4
TRAPPC4-208ENST00000527680 TAS2R43P59537 309 aa17.53■□□□□ 0.4
TRAPPC4-208ENST00000527680 STEAP3Q658P3 488 aa17.53■□□□□ 0.4
TRAPPC4-208ENST00000527680 CDH26Q8IXH8 852 aa17.53■□□□□ 0.4
TRAPPC4-208ENST00000527680 FAM71E2Q8N5Q1 922 aa17.53■□□□□ 0.4
TRAPPC4-208ENST00000527680 KCTD7Q96MP8 289 aa17.53■□□□□ 0.4
TRAPPC4-208ENST00000527680 ZNF107Q9UII5 783 aaPredicted RBP17.53■□□□□ 0.4
TRAPPC4-208ENST00000527680 FAM90A10PA6NDY2 464 aa17.52■□□□□ 0.4
TRAPPC4-208ENST00000527680 FAM90A7PA6NKC0 464 aa17.52■□□□□ 0.4
TRAPPC4-208ENST00000527680 FAM90A23PA8MXZ1 464 aa17.52■□□□□ 0.4
TRAPPC4-208ENST00000527680 EBAG9O00559 213 aa17.52■□□□□ 0.4
TRAPPC4-208ENST00000527680 IGHG4P01861 327 aa17.52■□□□□ 0.4
TRAPPC4-208ENST00000527680 OR5H8P0DN80 308 aa17.52■□□□□ 0.4
TRAPPC4-208ENST00000527680 ECI1P42126 302 aa17.52■□□□□ 0.4
TRAPPC4-208ENST00000527680 ZNF137PP52743 207 aa17.52■□□□□ 0.4
TRAPPC4-208ENST00000527680 ADARB1P78563 741 aaKnown RBP17.52■□□□□ 0.4
TRAPPC4-208ENST00000527680 MMDQ15546 238 aa17.52■□□□□ 0.4
TRAPPC4-208ENST00000527680 MORN2Q502X0 79 aa17.52■□□□□ 0.4
TRAPPC4-208ENST00000527680 TMEM65Q6PI78 240 aa17.52■□□□□ 0.4
TRAPPC4-208ENST00000527680 DHRSXQ8N5I4 330 aa17.52■□□□□ 0.4
TRAPPC4-208ENST00000527680 SEC14L6B5MCN3 397 aa17.51■□□□□ 0.39
TRAPPC4-208ENST00000527680 LANCL1O43813 399 aa17.51■□□□□ 0.39
TRAPPC4-208ENST00000527680 GLAP06280 429 aa17.51■□□□□ 0.39
TRAPPC4-208ENST00000527680 CELP19835 753 aa17.51■□□□□ 0.39
TRAPPC4-208ENST00000527680 LSAMPQ13449 338 aa17.51■□□□□ 0.39
TRAPPC4-208ENST00000527680 DOC2BQ14184 412 aa17.51■□□□□ 0.39
TRAPPC4-208ENST00000527680 RNF152Q8N8N0 203 aa17.51■□□□□ 0.39
TRAPPC4-208ENST00000527680 OR52L2PQ8NGH6 319 aa17.51■□□□□ 0.39
TRAPPC4-208ENST00000527680 FAM46BQ96A09 425 aa17.51■□□□□ 0.39
TRAPPC4-208ENST00000527680 DERL3Q96Q80 235 aa17.51■□□□□ 0.39
TRAPPC4-208ENST00000527680 WSB1Q9Y6I7 421 aa17.51■□□□□ 0.39
TRAPPC4-208ENST00000527680 EFCAB10A6NFE3 127 aa17.5■□□□□ 0.39
TRAPPC4-208ENST00000527680 IGF1P05019 195 aa17.5■□□□□ 0.39
TRAPPC4-208ENST00000527680 NKAPLQ5M9Q1 402 aa17.5■□□□□ 0.39
TRAPPC4-208ENST00000527680 GAPTQ8N292 157 aa17.5■□□□□ 0.39
TRAPPC4-208ENST00000527680 ZNF485Q8NCK3 441 aa17.5■□□□□ 0.39
TRAPPC4-208ENST00000527680 OR11H1Q8NG94 326 aa17.5■□□□□ 0.39
TRAPPC4-208ENST00000527680 C4orf3Q8WVX3 66 aa17.5■□□□□ 0.39
TRAPPC4-208ENST00000527680 PRR25Q96S07 402 aa17.5■□□□□ 0.39
TRAPPC4-208ENST00000527680 ZNF251Q9BRH9 671 aa17.5■□□□□ 0.39
TRAPPC4-208ENST00000527680 MYL12BO14950 172 aa17.49■□□□□ 0.39
TRAPPC4-208ENST00000527680 SC5DO75845 299 aa17.49■□□□□ 0.39
TRAPPC4-208ENST00000527680 NHLRC4P0CG21 123 aaPredicted RBP17.49■□□□□ 0.39
TRAPPC4-208ENST00000527680 PPP1CCP36873 323 aaKnown RBP17.49■□□□□ 0.39
TRAPPC4-208ENST00000527680 CFHR3Q02985 330 aa17.49■□□□□ 0.39
TRAPPC4-208ENST00000527680 GNMTQ14749 295 aa17.49■□□□□ 0.39
TRAPPC4-208ENST00000527680 C5orf24Q7Z6I8 188 aa17.49■□□□□ 0.39
TRAPPC4-208ENST00000527680 Q96M66 194 aa17.49■□□□□ 0.39
TRAPPC4-208ENST00000527680 CHCHD6Q9BRQ6 235 aa17.49■□□□□ 0.39
TRAPPC4-208ENST00000527680 ABHD14AQ9BUJ0 271 aa17.49■□□□□ 0.39
TRAPPC4-208ENST00000527680 PDCD6O75340 191 aa17.48■□□□□ 0.39
TRAPPC4-208ENST00000527680 RGS11O94810 467 aa17.48■□□□□ 0.39
TRAPPC4-208ENST00000527680 PSMB8P28062 276 aa17.48■□□□□ 0.39
TRAPPC4-208ENST00000527680 ACTBP60709 375 aa17.48■□□□□ 0.39
TRAPPC4-208ENST00000527680 ZNF260Q3ZCT1 412 aa17.48■□□□□ 0.39
TRAPPC4-208ENST00000527680 SIGIRRQ6IA17 410 aa17.48■□□□□ 0.39
TRAPPC4-208ENST00000527680 NKAIN3Q8N8D7 197 aa17.48■□□□□ 0.39
TRAPPC4-208ENST00000527680 GALMQ96C23 342 aa17.48■□□□□ 0.39
TRAPPC4-208ENST00000527680 NEDD4LQ96PU5 975 aa17.48■□□□□ 0.39
TRAPPC4-208ENST00000527680 UQCC2Q9BRT2 126 aa17.48■□□□□ 0.39
TRAPPC4-208ENST00000527680 CST11Q9H112 138 aa17.48■□□□□ 0.39
TRAPPC4-208ENST00000527680 MBNL3Q9NUK0 354 aaKnown RBP17.48■□□□□ 0.39
TRAPPC4-208ENST00000527680 JPT1Q9UK76 154 aa17.48■□□□□ 0.39
TRAPPC4-208ENST00000527680 NBEAL2Q6ZNJ1 2754 aa17.48■□□□□ 0.39
TRAPPC4-208ENST00000527680 MAPK3P27361 379 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC4-208ENST00000527680 WNT4P56705 351 aa17.47■□□□□ 0.39
TRAPPC4-208ENST00000527680 OR1N2Q8NGR9 330 aa17.47■□□□□ 0.39
TRAPPC4-208ENST00000527680 MRPL30Q8TCC3 161 aaKnown RBP17.47■□□□□ 0.39
TRAPPC4-208ENST00000527680 THRSPQ92748 146 aa17.47■□□□□ 0.39
TRAPPC4-208ENST00000527680 RITA1Q96K30 269 aa17.47■□□□□ 0.39
TRAPPC4-208ENST00000527680 OR5B12Q96R08 314 aa17.47■□□□□ 0.39
TRAPPC4-208ENST00000527680 MRPL20Q9BYC9 149 aaKnown RBP17.47■□□□□ 0.39
TRAPPC4-208ENST00000527680 C8orf4Q9NR00 106 aa17.47■□□□□ 0.39
TRAPPC4-208ENST00000527680 PARP11Q9NR21 331 aa17.47■□□□□ 0.39
TRAPPC4-208ENST00000527680 GHRLQ9UBU3 117 aa17.47■□□□□ 0.39
TRAPPC4-208ENST00000527680 SCOCQ9UIL1 159 aa17.47■□□□□ 0.39
TRAPPC4-208ENST00000527680 LRRC42Q9Y546 428 aa17.47■□□□□ 0.39
TRAPPC4-208ENST00000527680 DNAH9Q9NYC9 4486 aa17.46■□□□□ 0.39
TRAPPC4-208ENST00000527680 G3V318 75 aa17.46■□□□□ 0.39
TRAPPC4-208ENST00000527680 CNTFRP26992 372 aa17.46■□□□□ 0.39
TRAPPC4-208ENST00000527680 HTD2P86397 168 aa17.46■□□□□ 0.39
TRAPPC4-208ENST00000527680 LIN54Q6MZP7 749 aa17.46■□□□□ 0.39
TRAPPC4-208ENST00000527680 AHSA2Q719I0 299 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms