RNA–Protein interactions for RNA: ENST00000526570.5

FGFR1-227, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 5,528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-227ENST00000526570 GJC3Q8NFK1 279 aa10.85□□□□□ -0.67
FGFR1-227ENST00000526570 OR8B2Q96RD0 313 aa10.85□□□□□ -0.67
FGFR1-227ENST00000526570 A0A1W2PP11 408 aa10.85□□□□□ -0.67
FGFR1-227ENST00000526570 NUBP1P53384 320 aa10.85□□□□□ -0.67
FGFR1-227ENST00000526570 RPS16P62249 146 aaKnown RBP10.85□□□□□ -0.67
FGFR1-227ENST00000526570 FMODQ06828 376 aa10.85□□□□□ -0.67
FGFR1-227ENST00000526570 TWIST1Q15672 202 aa10.85□□□□□ -0.67
FGFR1-227ENST00000526570 TIMM23BQ5SRD1 257 aa10.85□□□□□ -0.67
FGFR1-227ENST00000526570 LHFPL2Q6ZUX7 228 aa10.85□□□□□ -0.67
FGFR1-227ENST00000526570 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.84□□□□□ -0.67
FGFR1-227ENST00000526570 CELA2BP08218 269 aaPredicted RBP10.84□□□□□ -0.67
FGFR1-227ENST00000526570 CD22P20273 847 aa10.84□□□□□ -0.67
FGFR1-227ENST00000526570 RND3P61587 244 aa10.84□□□□□ -0.67
FGFR1-227ENST00000526570 MEF2BQ02080 365 aaPredicted RBP10.84□□□□□ -0.67
FGFR1-227ENST00000526570 MVB12AQ96EY5 273 aa10.84□□□□□ -0.67
FGFR1-227ENST00000526570 SDF2Q99470 211 aa10.84□□□□□ -0.67
FGFR1-227ENST00000526570 AAMDCQ9H7C9 122 aa10.84□□□□□ -0.67
FGFR1-227ENST00000526570 HEXA-AS1Q9H8Q6 139 aa10.84□□□□□ -0.67
FGFR1-227ENST00000526570 C20orf141Q9NUB4 165 aa10.84□□□□□ -0.67
FGFR1-227ENST00000526570 ZNF346Q9UL40 294 aaKnown RBP10.84□□□□□ -0.67
FGFR1-227ENST00000526570 FER1L6Q2WGJ9 1857 aa10.84□□□□□ -0.67
FGFR1-227ENST00000526570 PITX3O75364 302 aa10.84□□□□□ -0.67
FGFR1-227ENST00000526570 TNFSF13O75888 250 aa10.84□□□□□ -0.67
FGFR1-227ENST00000526570 COL8A1P27658 744 aa10.84□□□□□ -0.67
FGFR1-227ENST00000526570 C1orf140Q5VVS0 124 aa10.84□□□□□ -0.67
FGFR1-227ENST00000526570 ASB5Q8WWX0 329 aa10.84□□□□□ -0.67
FGFR1-227ENST00000526570 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.84□□□□□ -0.67
FGFR1-227ENST00000526570 NXPH1P58417 271 aa10.84□□□□□ -0.67
FGFR1-227ENST00000526570 WDR38Q5JTN6 314 aa10.84□□□□□ -0.67
FGFR1-227ENST00000526570 C1orf194Q5T5A4 169 aa10.84□□□□□ -0.67
FGFR1-227ENST00000526570 S1PR3Q99500 378 aa10.84□□□□□ -0.67
FGFR1-227ENST00000526570 GPR84Q9NQS5 396 aa10.84□□□□□ -0.67
FGFR1-227ENST00000526570 CACNG5Q9UF02 275 aa10.84□□□□□ -0.67
FGFR1-227ENST00000526570 TUBGCP6Q96RT7 1819 aa10.84□□□□□ -0.67
FGFR1-227ENST00000526570 ARFGEF1Q9Y6D6 1849 aa10.84□□□□□ -0.67
FGFR1-227ENST00000526570 SCN1AP35498 2009 aa10.84□□□□□ -0.67
FGFR1-227ENST00000526570 PPIAL4EA0A075B759 164 aa10.84□□□□□ -0.67
FGFR1-227ENST00000526570 GREM1O60565 184 aa10.84□□□□□ -0.67
FGFR1-227ENST00000526570 C1QL1O75973 258 aa10.84□□□□□ -0.67
FGFR1-227ENST00000526570 PPIAL4FP0DN26 164 aa10.84□□□□□ -0.67
FGFR1-227ENST00000526570 CLDN18P56856 261 aa10.84□□□□□ -0.67
FGFR1-227ENST00000526570 SRSF3P84103 164 aaKnown RBP10.84□□□□□ -0.67
FGFR1-227ENST00000526570 HIST1H2BLQ99880 126 aa10.84□□□□□ -0.67
FGFR1-227ENST00000526570 PPIAL4AQ9Y536 164 aa10.84□□□□□ -0.67
FGFR1-227ENST00000526570 TRBV5-3A0A0A0MS03 114 aa10.83□□□□□ -0.67
FGFR1-227ENST00000526570 COLCA2A8K830 154 aa10.83□□□□□ -0.67
FGFR1-227ENST00000526570 ARHGAP5-AS1Q96IT6 56 aa10.83□□□□□ -0.67
FGFR1-227ENST00000526570 ZNF816Q0VGE8 651 aaPredicted RBP10.83□□□□□ -0.68
FGFR1-227ENST00000526570 ACSF3Q4G176 576 aaPredicted RBP10.83□□□□□ -0.68
FGFR1-227ENST00000526570 NT5CQ8TCD5 201 aa10.83□□□□□ -0.68
FGFR1-227ENST00000526570 LRRC29Q8WV35 223 aa10.83□□□□□ -0.68
FGFR1-227ENST00000526570 COMMD5Q9GZQ3 224 aa10.83□□□□□ -0.68
FGFR1-227ENST00000526570 CST9LQ9H4G1 147 aa10.83□□□□□ -0.68
FGFR1-227ENST00000526570 MRPS18AQ9NVS2 196 aaKnown RBP10.83□□□□□ -0.68
FGFR1-227ENST00000526570 A0A087WWC5 75 aa10.83□□□□□ -0.68
FGFR1-227ENST00000526570 GAGE12BA1L429 117 aa10.83□□□□□ -0.68
FGFR1-227ENST00000526570 FFAR1O14842 300 aa10.83□□□□□ -0.68
FGFR1-227ENST00000526570 GZMMP51124 257 aa10.83□□□□□ -0.68
FGFR1-227ENST00000526570 FAM53BQ14153 422 aa10.83□□□□□ -0.68
FGFR1-227ENST00000526570 SHBQ15464 509 aa10.83□□□□□ -0.68
FGFR1-227ENST00000526570 UNQ5815/PRO19632Q6UWF5 114 aa10.83□□□□□ -0.68
FGFR1-227ENST00000526570 SLC25A26Q70HW3 274 aa10.83□□□□□ -0.68
FGFR1-227ENST00000526570 NR2C2APQ86WQ0 139 aa10.83□□□□□ -0.68
FGFR1-227ENST00000526570 LOXL4Q96JB6 756 aa10.83□□□□□ -0.68
FGFR1-227ENST00000526570 TMEM204Q9BSN7 226 aa10.83□□□□□ -0.68
FGFR1-227ENST00000526570 NGBQ9NPG2 151 aa10.83□□□□□ -0.68
FGFR1-227ENST00000526570 TMEM106BQ9NUM4 274 aa10.83□□□□□ -0.68
FGFR1-227ENST00000526570 CHST1O43916 411 aa10.83□□□□□ -0.68
FGFR1-227ENST00000526570 IGHV2-70P01814 119 aa10.83□□□□□ -0.68
FGFR1-227ENST00000526570 PF4V1P10720 104 aa10.83□□□□□ -0.68
FGFR1-227ENST00000526570 PSG1P11464 419 aa10.83□□□□□ -0.68
FGFR1-227ENST00000526570 UCP3P55916 312 aa10.83□□□□□ -0.68
FGFR1-227ENST00000526570 UBE2L3P68036 154 aaKnown RBP10.83□□□□□ -0.68
FGFR1-227ENST00000526570 LCN2P80188 198 aa10.83□□□□□ -0.68
FGFR1-227ENST00000526570 C16orf52Q8NHV5 167 aa10.83□□□□□ -0.68
FGFR1-227ENST00000526570 CISD1Q9NZ45 108 aaKnown RBP10.83□□□□□ -0.68
FGFR1-227ENST00000526570 HILPDAQ9Y5L2 63 aa10.83□□□□□ -0.68
FGFR1-227ENST00000526570 TMEM238C9JI98 176 aa10.83□□□□□ -0.68
FGFR1-227ENST00000526570 SEC11AP67812 179 aa10.83□□□□□ -0.68
FGFR1-227ENST00000526570 HIKESHIQ53FT3 197 aa10.83□□□□□ -0.68
FGFR1-227ENST00000526570 PYY3Q5JQD4 70 aa10.83□□□□□ -0.68
FGFR1-227ENST00000526570 MRPL24Q96A35 216 aaKnown RBP10.83□□□□□ -0.68
FGFR1-227ENST00000526570 LHX9Q9NQ69 397 aa10.83□□□□□ -0.68
FGFR1-227ENST00000526570 F5P12259 2224 aa10.83□□□□□ -0.68
FGFR1-227ENST00000526570 KBTBD11-OT1A0A1B0GTJ5 212 aa10.82□□□□□ -0.68
FGFR1-227ENST00000526570 FCGR3AP08637 254 aa10.82□□□□□ -0.68
FGFR1-227ENST00000526570 RAE1P78406 368 aaKnown RBP10.82□□□□□ -0.68
FGFR1-227ENST00000526570 DOLPP1Q86YN1 238 aa10.82□□□□□ -0.68
FGFR1-227ENST00000526570 HIST3H2BBQ8N257 126 aa10.82□□□□□ -0.68
FGFR1-227ENST00000526570 OR8G5Q8NG78 346 aa10.82□□□□□ -0.68
FGFR1-227ENST00000526570 GPBAR1Q8TDU6 330 aa10.82□□□□□ -0.68
FGFR1-227ENST00000526570 PBOV1Q9GZY1 135 aa10.82□□□□□ -0.68
FGFR1-227ENST00000526570 TRAV8-4A0A0B4J246 113 aa10.82□□□□□ -0.68
FGFR1-227ENST00000526570 A0A1B0GTH9 108 aa10.82□□□□□ -0.68
FGFR1-227ENST00000526570 LOC389332A0A1B0GUA5 103 aa10.82□□□□□ -0.68
FGFR1-227ENST00000526570 SYNGR2O43760 224 aa10.82□□□□□ -0.68
FGFR1-227ENST00000526570 HIST1H2BKO60814 126 aa10.82□□□□□ -0.68
FGFR1-227ENST00000526570 CXorf1O96002 111 aa10.82□□□□□ -0.68
FGFR1-227ENST00000526570 HIST1H2BJP06899 126 aa10.82□□□□□ -0.68
FGFR1-227ENST00000526570 SELLP14151 372 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms