RNA–Protein interactions for RNA: ENST00000526313.5

USH1C-204, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best)

Gene USH1C, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-204ENST00000526313 MST1LQ2TV78 715 aa13.35□□□□□ -0.27
USH1C-204ENST00000526313 PRR18Q8N4B5 295 aa13.35□□□□□ -0.27
USH1C-204ENST00000526313 OR1L1Q8NH94 360 aa13.35□□□□□ -0.27
USH1C-204ENST00000526313 GALMQ96C23 342 aa13.35□□□□□ -0.27
USH1C-204ENST00000526313 SMIM8Q96KF7 97 aa13.35□□□□□ -0.27
USH1C-204ENST00000526313 LURAP1Q96LR2 239 aa13.35□□□□□ -0.27
USH1C-204ENST00000526313 NARFLQ9H6Q4 476 aa13.35□□□□□ -0.27
USH1C-204ENST00000526313 LPAR3Q9UBY5 353 aa13.35□□□□□ -0.27
USH1C-204ENST00000526313 CUL9Q8IWT3 2517 aa13.35□□□□□ -0.27
USH1C-204ENST00000526313 PSG2P11465 335 aa13.34□□□□□ -0.27
USH1C-204ENST00000526313 CD40P25942 277 aa13.34□□□□□ -0.27
USH1C-204ENST00000526313 PRDX2P32119 198 aa13.34□□□□□ -0.27
USH1C-204ENST00000526313 GATA4P43694 442 aa13.34□□□□□ -0.27
USH1C-204ENST00000526313 RPS23P62266 143 aaKnown RBP13.34□□□□□ -0.27
USH1C-204ENST00000526313 CXorf66Q5JRM2 361 aaPredicted RBP13.34□□□□□ -0.27
USH1C-204ENST00000526313 UBALD1Q8TB05 177 aa13.34□□□□□ -0.27
USH1C-204ENST00000526313 LSM10Q969L4 123 aaKnown RBP13.34□□□□□ -0.27
USH1C-204ENST00000526313 MEGF10Q96KG7 1140 aa13.34□□□□□ -0.27
USH1C-204ENST00000526313 WFDC1Q9HC57 220 aa13.34□□□□□ -0.27
USH1C-204ENST00000526313 TAS2R3Q9NYW6 316 aa13.34□□□□□ -0.27
USH1C-204ENST00000526313 PLA2G2EQ9NZK7 142 aa13.34□□□□□ -0.27
USH1C-204ENST00000526313 DCHS1Q96JQ0 3298 aa13.34□□□□□ -0.27
USH1C-204ENST00000526313 DMXL2Q8TDJ6 3036 aa13.34□□□□□ -0.27
USH1C-204ENST00000526313 NUDT19A8MXV4 375 aa13.34□□□□□ -0.27
USH1C-204ENST00000526313 ATP6V1G2-DDX39BF2Z307 99 aa13.34□□□□□ -0.27
USH1C-204ENST00000526313 HBZP02008 142 aa13.34□□□□□ -0.27
USH1C-204ENST00000526313 TFF1P04155 84 aa13.34□□□□□ -0.27
USH1C-204ENST00000526313 OR8U9P0C7N5 309 aa13.34□□□□□ -0.27
USH1C-204ENST00000526313 SULT1A2P50226 295 aa13.34□□□□□ -0.27
USH1C-204ENST00000526313 MSMO1Q15800 293 aa13.34□□□□□ -0.27
USH1C-204ENST00000526313 SPRNQ5BIV9 151 aa13.34□□□□□ -0.27
USH1C-204ENST00000526313 KIAA2026Q5HYC2 2103 aa13.34□□□□□ -0.27
USH1C-204ENST00000526313 UQCC3Q6UW78 93 aa13.34□□□□□ -0.27
USH1C-204ENST00000526313 STPG2Q8N412 459 aa13.34□□□□□ -0.27
USH1C-204ENST00000526313 DRAM1Q8N682 238 aa13.34□□□□□ -0.27
USH1C-204ENST00000526313 GCSAMQ8N6F7 178 aa13.34□□□□□ -0.27
USH1C-204ENST00000526313 ZBTB34Q8NCN2 500 aa13.34□□□□□ -0.27
USH1C-204ENST00000526313 OR8U1Q8NH10 309 aa13.34□□□□□ -0.27
USH1C-204ENST00000526313 IGKV1D-17A0A075B6S4 117 aa13.33□□□□□ -0.28
USH1C-204ENST00000526313 A0A0G2JRQ6 117 aa13.33□□□□□ -0.28
USH1C-204ENST00000526313 A0A1B0GU03 582 aa13.33□□□□□ -0.28
USH1C-204ENST00000526313 IGKV1-39P01597 117 aa13.33□□□□□ -0.28
USH1C-204ENST00000526313 IGKV1D-39P04432 117 aa13.33□□□□□ -0.28
USH1C-204ENST00000526313 POLR2GP62487 172 aaKnown RBP eCLIP13.33□□□□□ -0.28
USH1C-204ENST00000526313 EIF4EBP1Q13541 118 aaPredicted RBP13.33□□□□□ -0.28
USH1C-204ENST00000526313 ZNF585BQ52M93 769 aa13.33□□□□□ -0.28
USH1C-204ENST00000526313 KRBOX4Q5JUW0 171 aa13.33□□□□□ -0.28
USH1C-204ENST00000526313 ALKBH2Q6NS38 261 aa13.33□□□□□ -0.28
USH1C-204ENST00000526313 GFRALQ6UXV0 394 aa13.33□□□□□ -0.28
USH1C-204ENST00000526313 OR2C3Q8N628 320 aa13.33□□□□□ -0.28
USH1C-204ENST00000526313 NUP37Q8NFH4 326 aa13.33□□□□□ -0.28
USH1C-204ENST00000526313 OR51H1Q8NH63 302 aa13.33□□□□□ -0.28
USH1C-204ENST00000526313 GPR146Q96CH1 333 aa13.33□□□□□ -0.28
USH1C-204ENST00000526313 OR2V2Q96R30 315 aa13.33□□□□□ -0.28
USH1C-204ENST00000526313 SPTBN2O15020 2390 aa13.33□□□□□ -0.28
USH1C-204ENST00000526313 KIAA1324LA8MWY0 1029 aaPredicted RBP13.33□□□□□ -0.28
USH1C-204ENST00000526313 SERPINE2P07093 398 aa13.33□□□□□ -0.28
USH1C-204ENST00000526313 GLIPR1P48060 266 aa13.33□□□□□ -0.28
USH1C-204ENST00000526313 NHLH1Q02575 133 aa13.33□□□□□ -0.28
USH1C-204ENST00000526313 NHLH2Q02577 135 aa13.33□□□□□ -0.28
USH1C-204ENST00000526313 CR1LQ2VPA4 569 aa13.33□□□□□ -0.28
USH1C-204ENST00000526313 SNRNP40Q96DI7 357 aaKnown RBP13.33□□□□□ -0.28
USH1C-204ENST00000526313 GINS3Q9BRX5 216 aa13.33□□□□□ -0.28
USH1C-204ENST00000526313 MRPL37Q9BZE1 423 aaKnown RBP13.33□□□□□ -0.28
USH1C-204ENST00000526313 SMIM3Q9BZL3 60 aa13.33□□□□□ -0.28
USH1C-204ENST00000526313 ASF1BQ9NVP2 202 aa13.33□□□□□ -0.28
USH1C-204ENST00000526313 PPP1R3CQ9UQK1 317 aa13.33□□□□□ -0.28
USH1C-204ENST00000526313 RNF115Q9Y4L5 304 aa13.33□□□□□ -0.28
USH1C-204ENST00000526313 C16orf97H3BN30 126 aa13.32□□□□□ -0.28
USH1C-204ENST00000526313 PVALBP20472 110 aaPredicted RBP13.32□□□□□ -0.28
USH1C-204ENST00000526313 M6PRP20645 277 aa13.32□□□□□ -0.28
USH1C-204ENST00000526313 IL2RGP31785 369 aa13.32□□□□□ -0.28
USH1C-204ENST00000526313 EWSR1Q01844 656 aaKnown RBP eCLIP13.32□□□□□ -0.28
USH1C-204ENST00000526313 CLEC9AQ6UXN8 241 aa13.32□□□□□ -0.28
USH1C-204ENST00000526313 ZNF645Q8N7E2 425 aa13.32□□□□□ -0.28
USH1C-204ENST00000526313 PLEKHF2Q9H8W4 249 aa13.32□□□□□ -0.28
USH1C-204ENST00000526313 LYRM2Q9NU23 88 aaPredicted RBP13.32□□□□□ -0.28
USH1C-204ENST00000526313 C15orf65H3BRN8 121 aa13.31□□□□□ -0.28
USH1C-204ENST00000526313 GABRA2P47869 451 aa13.31□□□□□ -0.28
USH1C-204ENST00000526313 TRAT1Q6PIZ9 186 aa13.31□□□□□ -0.28
USH1C-204ENST00000526313 OR52L2PQ8NGH6 319 aa13.31□□□□□ -0.28
USH1C-204ENST00000526313 OR13A1Q8NGR1 328 aa13.31□□□□□ -0.28
USH1C-204ENST00000526313 MRGPRDQ8TDS7 321 aa13.31□□□□□ -0.28
USH1C-204ENST00000526313 LIN7CQ9NUP9 197 aaKnown RBP13.31□□□□□ -0.28
USH1C-204ENST00000526313 ZGRF1Q86YA3 2104 aa13.31□□□□□ -0.28
USH1C-204ENST00000526313 ATMQ13315 3056 aa13.31□□□□□ -0.28
USH1C-204ENST00000526313 BORCS7-ASMTA0A0B4J1R7 106 aa13.31□□□□□ -0.28
USH1C-204ENST00000526313 ZNF705EA8MWA4 302 aaPredicted RBP13.31□□□□□ -0.28
USH1C-204ENST00000526313 SCO1O75880 301 aa13.31□□□□□ -0.28
USH1C-204ENST00000526313 TMEM50AO95807 157 aa13.31□□□□□ -0.28
USH1C-204ENST00000526313 SEC11BP0C7V7 166 aa13.31□□□□□ -0.28
USH1C-204ENST00000526313 HTD2P86397 168 aa13.31□□□□□ -0.28
USH1C-204ENST00000526313 VHLLQ6RSH7 139 aa13.31□□□□□ -0.28
USH1C-204ENST00000526313 SSX8Q7RTT4 187 aa13.31□□□□□ -0.28
USH1C-204ENST00000526313 ODF3L1Q8IXM7 274 aa13.31□□□□□ -0.28
USH1C-204ENST00000526313 FAM222BQ8WU58 562 aa13.31□□□□□ -0.28
USH1C-204ENST00000526313 ARL11Q969Q4 196 aa13.31□□□□□ -0.28
USH1C-204ENST00000526313 SNX22Q96L94 193 aa13.31□□□□□ -0.28
USH1C-204ENST00000526313 MMP26Q9NRE1 261 aa13.31□□□□□ -0.28
USH1C-204ENST00000526313 RBM7Q9Y580 266 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms