RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 TMX2-CTNND1H3BSU7 103 aa3.23□□□□□ -1.89
USP47-206ENST00000525367 CHP2O43745 196 aa3.23□□□□□ -1.89
USP47-206ENST00000525367 NOS1APO75052 506 aaPredicted RBP3.23□□□□□ -1.89
USP47-206ENST00000525367 POP7O75817 140 aaKnown RBP3.23□□□□□ -1.89
USP47-206ENST00000525367 CDRT1O95170 752 aa3.23□□□□□ -1.89
USP47-206ENST00000525367 HAND1O96004 215 aa3.23□□□□□ -1.89
USP47-206ENST00000525367 IGKV1-39P01597 117 aa3.23□□□□□ -1.89
USP47-206ENST00000525367 HLA-DQB1P01920 261 aa3.23□□□□□ -1.89
USP47-206ENST00000525367 IGKV1D-39P04432 117 aa3.23□□□□□ -1.89
USP47-206ENST00000525367 RPSAP08865 295 aaKnown RBP3.23□□□□□ -1.89
USP47-206ENST00000525367 FBP1P09467 338 aa3.23□□□□□ -1.89
USP47-206ENST00000525367 KRTAP1-4P0C5Y4 121 aa3.23□□□□□ -1.89
USP47-206ENST00000525367 OR5G3P0C626 314 aa3.23□□□□□ -1.89
USP47-206ENST00000525367 CD36P16671 472 aa3.23□□□□□ -1.89
USP47-206ENST00000525367 OPRK1P41145 380 aa3.23□□□□□ -1.89
USP47-206ENST00000525367 PSMB3P49720 205 aa3.23□□□□□ -1.89
USP47-206ENST00000525367 RPS24P62847 133 aaKnown RBP3.23□□□□□ -1.89
USP47-206ENST00000525367 HLA-DRB3P79483 266 aa3.23□□□□□ -1.89
USP47-206ENST00000525367 KRR1Q13601 381 aaKnown RBP3.23□□□□□ -1.89
USP47-206ENST00000525367 NPATQ14207 1427 aa3.23□□□□□ -1.89
USP47-206ENST00000525367 LUZP6Q538Z0 58 aa3.23□□□□□ -1.89
USP47-206ENST00000525367 ZFP1Q6P2D0 407 aa3.23□□□□□ -1.89
USP47-206ENST00000525367 NEGR1Q7Z3B1 354 aa3.23□□□□□ -1.89
USP47-206ENST00000525367 ATP5L2Q7Z4Y8 100 aa3.23□□□□□ -1.89
USP47-206ENST00000525367 CALHM3Q86XJ0 350 aa3.23□□□□□ -1.89
USP47-206ENST00000525367 OR1L8Q8NGR8 309 aa3.23□□□□□ -1.89
USP47-206ENST00000525367 LINC01560Q8TB33 94 aa3.23□□□□□ -1.89
USP47-206ENST00000525367 FAM172AQ8WUF8 416 aa3.23□□□□□ -1.89
USP47-206ENST00000525367 SLC35B4Q969S0 331 aa3.23□□□□□ -1.89
USP47-206ENST00000525367 ACY3Q96HD9 319 aa3.23□□□□□ -1.89
USP47-206ENST00000525367 ANKRD36BP1Q96IX9 119 aa3.23□□□□□ -1.89
USP47-206ENST00000525367 GPR82Q96P67 336 aa3.23□□□□□ -1.89
USP47-206ENST00000525367 GNB1LQ9BYB4 327 aa3.23□□□□□ -1.89
USP47-206ENST00000525367 TRIM4Q9C037 500 aa3.23□□□□□ -1.89
USP47-206ENST00000525367 NMNAT1Q9HAN9 279 aaPredicted RBP3.23□□□□□ -1.89
USP47-206ENST00000525367 ZNF355PQ9NSJ1 428 aa3.23□□□□□ -1.89
USP47-206ENST00000525367 ZNF391Q9UJN7 358 aa3.23□□□□□ -1.89
USP47-206ENST00000525367 EIF3AQ14152 1382 aaKnown RBP3.23□□□□□ -1.89
USP47-206ENST00000525367 SCN2AQ99250 2005 aa3.22□□□□□ -1.89
USP47-206ENST00000525367 A0A096LNJ9 63 aa3.22□□□□□ -1.89
USP47-206ENST00000525367 IGHV1-3A0A0C4DH29 117 aa3.22□□□□□ -1.89
USP47-206ENST00000525367 H0YJX3 145 aa3.22□□□□□ -1.89
USP47-206ENST00000525367 CST2P09228 141 aa3.22□□□□□ -1.89
USP47-206ENST00000525367 FAM228BP0C875 321 aa3.22□□□□□ -1.89
USP47-206ENST00000525367 OR13C7P0DN81 318 aa3.22□□□□□ -1.89
USP47-206ENST00000525367 ZNF823P16415 610 aa3.22□□□□□ -1.89
USP47-206ENST00000525367 S100A2P29034 98 aa3.22□□□□□ -1.89
USP47-206ENST00000525367 MARCKSL1P49006 195 aa3.22□□□□□ -1.89
USP47-206ENST00000525367 CMC4P56277 68 aaPredicted RBP3.22□□□□□ -1.89
USP47-206ENST00000525367 TMEM267Q0VDI3 215 aaPredicted RBP3.22□□□□□ -1.89
USP47-206ENST00000525367 POU6F1Q14863 301 aa3.22□□□□□ -1.89
USP47-206ENST00000525367 JOSD1Q15040 202 aaPredicted RBP3.22□□□□□ -1.89
USP47-206ENST00000525367 LIN52Q52LA3 116 aa3.22□□□□□ -1.89
USP47-206ENST00000525367 MRPL2Q5T653 305 aaKnown RBP3.22□□□□□ -1.89
USP47-206ENST00000525367 TMEM42Q69YG0 159 aa3.22□□□□□ -1.89
USP47-206ENST00000525367 WDR86Q86TI4 376 aa3.22□□□□□ -1.89
USP47-206ENST00000525367 TMEM75Q8N9X5 138 aa3.22□□□□□ -1.89
USP47-206ENST00000525367 OR2K2Q8NGT1 345 aa3.22□□□□□ -1.89
USP47-206ENST00000525367 OR52N1Q8NH53 320 aa3.22□□□□□ -1.89
USP47-206ENST00000525367 OR2V1Q8NHB1 315 aa3.22□□□□□ -1.89
USP47-206ENST00000525367 NEK7Q8TDX7 302 aa3.22□□□□□ -1.89
USP47-206ENST00000525367 SLC25A46Q96AG3 418 aa3.22□□□□□ -1.89
USP47-206ENST00000525367 REEP6Q96HR9 211 aa3.22□□□□□ -1.89
USP47-206ENST00000525367 TRIB3Q96RU7 358 aa3.22□□□□□ -1.89
USP47-206ENST00000525367 SIGMAR1Q99720 223 aa3.22□□□□□ -1.89
USP47-206ENST00000525367 KIFC1Q9BW19 673 aa3.22□□□□□ -1.89
USP47-206ENST00000525367 MS4A8Q9BY19 250 aa3.22□□□□□ -1.89
USP47-206ENST00000525367 GTSF1LQ9H1H1 148 aa3.22□□□□□ -1.89
USP47-206ENST00000525367 FAM96AQ9H5X1 160 aa3.22□□□□□ -1.89
USP47-206ENST00000525367 DOK5Q9P104 306 aa3.22□□□□□ -1.89
USP47-206ENST00000525367 FIS1Q9Y3D6 152 aa3.22□□□□□ -1.89
USP47-206ENST00000525367 ZNF318Q5VUA4 2279 aa3.22□□□□□ -1.89
USP47-206ENST00000525367 PIKFYVEQ9Y2I7 2098 aa3.21□□□□□ -1.89
USP47-206ENST00000525367 ATRNO75882 1429 aa3.21□□□□□ -1.9
USP47-206ENST00000525367 DISC1C4P0D8 188 aa3.21□□□□□ -1.9
USP47-206ENST00000525367 RBFOX2O43251 390 aaKnown RBP eCLIP3.21□□□□□ -1.9
USP47-206ENST00000525367 ZNF861PO60384 105 aa3.21□□□□□ -1.9
USP47-206ENST00000525367 ORM2P19652 201 aa3.21□□□□□ -1.9
USP47-206ENST00000525367 OR1E2P47887 323 aa3.21□□□□□ -1.9
USP47-206ENST00000525367 PSME3P61289 254 aa3.21□□□□□ -1.9
USP47-206ENST00000525367 HIST1H3AP68431 136 aa3.21□□□□□ -1.9
USP47-206ENST00000525367 H3F3AP84243 136 aa3.21□□□□□ -1.9
USP47-206ENST00000525367 IFITM2Q01629 132 aa3.21□□□□□ -1.9
USP47-206ENST00000525367 PRDX4Q13162 271 aa3.21□□□□□ -1.9
USP47-206ENST00000525367 PMAIP1Q13794 54 aa3.21□□□□□ -1.9
USP47-206ENST00000525367 DEFB116Q30KQ4 102 aa3.21□□□□□ -1.9
USP47-206ENST00000525367 ACOT6Q3I5F7 207 aaPredicted RBP3.21□□□□□ -1.9
USP47-206ENST00000525367 KLHL12Q53G59 568 aa3.21□□□□□ -1.9
USP47-206ENST00000525367 DHRS4L2Q6PKH6 230 aa3.21□□□□□ -1.9
USP47-206ENST00000525367 LINC01551Q86U37 167 aa3.21□□□□□ -1.9
USP47-206ENST00000525367 MARCH3Q86UD3 253 aa3.21□□□□□ -1.9
USP47-206ENST00000525367 TMEM86BQ8N661 226 aa3.21□□□□□ -1.9
USP47-206ENST00000525367 UBL4BQ8N7F7 174 aa3.21□□□□□ -1.9
USP47-206ENST00000525367 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.21□□□□□ -1.9
USP47-206ENST00000525367 OR52B2Q96RD2 323 aa3.21□□□□□ -1.9
USP47-206ENST00000525367 NIPSNAP1Q9BPW8 284 aa3.21□□□□□ -1.9
USP47-206ENST00000525367 CMSS1Q9BQ75 279 aaKnown RBP3.21□□□□□ -1.9
USP47-206ENST00000525367 MED18Q9BUE0 208 aa3.21□□□□□ -1.9
USP47-206ENST00000525367 ULBP3Q9BZM4 244 aa3.21□□□□□ -1.9
USP47-206ENST00000525367 DCSTAMPQ9H295 470 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms