RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 DERL3Q96Q80 235 aa3.84□□□□□ -1.79
USP47-204ENST00000525078 PLEKHF2Q9H8W4 249 aa3.84□□□□□ -1.79
USP47-204ENST00000525078 HMG20AQ9NP66 347 aa3.84□□□□□ -1.79
USP47-204ENST00000525078 CA10Q9NS85 328 aa3.84□□□□□ -1.79
USP47-204ENST00000525078 NEU3Q9UQ49 428 aa3.84□□□□□ -1.79
USP47-204ENST00000525078 ANGPT4Q9Y264 503 aa3.84□□□□□ -1.79
USP47-204ENST00000525078 WASHC3Q9Y3C0 194 aa3.84□□□□□ -1.79
USP47-204ENST00000525078 UFC1Q9Y3C8 167 aa3.84□□□□□ -1.79
USP47-204ENST00000525078 KIF15Q9NS87 1388 aa3.84□□□□□ -1.79
USP47-204ENST00000525078 VPS37CA5D8V6 355 aaPredicted RBP3.83□□□□□ -1.8
USP47-204ENST00000525078 A6NDX4 124 aa3.83□□□□□ -1.8
USP47-204ENST00000525078 PRSS44E7EML9 344 aa3.83□□□□□ -1.8
USP47-204ENST00000525078 TSTD3H0UI37 97 aa3.83□□□□□ -1.8
USP47-204ENST00000525078 TMEM250H0YL14 139 aa3.83□□□□□ -1.8
USP47-204ENST00000525078 ISLRO14498 428 aa3.83□□□□□ -1.8
USP47-204ENST00000525078 MRASO14807 208 aa3.83□□□□□ -1.8
USP47-204ENST00000525078 LINC01565O15544 149 aa3.83□□□□□ -1.8
USP47-204ENST00000525078 PDE6DO43924 150 aa3.83□□□□□ -1.8
USP47-204ENST00000525078 TTRP02766 147 aa3.83□□□□□ -1.8
USP47-204ENST00000525078 IGHV1-8P0DP01 117 aa3.83□□□□□ -1.8
USP47-204ENST00000525078 HIST1H1TP22492 207 aaPredicted RBP3.83□□□□□ -1.8
USP47-204ENST00000525078 CD34P28906 385 aa3.83□□□□□ -1.8
USP47-204ENST00000525078 PSMB3P49720 205 aa3.83□□□□□ -1.8
USP47-204ENST00000525078 ATP5G2Q06055 141 aa3.83□□□□□ -1.8
USP47-204ENST00000525078 HNRNPA0Q13151 305 aaKnown RBP3.83□□□□□ -1.8
USP47-204ENST00000525078 C9orf129Q5T035 196 aaKnown RBP3.83□□□□□ -1.8
USP47-204ENST00000525078 SLC16A13Q7RTY0 426 aa3.83□□□□□ -1.8
USP47-204ENST00000525078 ORMDL3Q8N138 153 aa3.83□□□□□ -1.8
USP47-204ENST00000525078 ZNF567Q8N184 647 aa3.83□□□□□ -1.8
USP47-204ENST00000525078 Q8N9W7 124 aa3.83□□□□□ -1.8
USP47-204ENST00000525078 ZNF555Q8NEP9 628 aa3.83□□□□□ -1.8
USP47-204ENST00000525078 OR51A2Q8NGJ7 313 aa3.83□□□□□ -1.8
USP47-204ENST00000525078 GALMQ96C23 342 aa3.83□□□□□ -1.8
USP47-204ENST00000525078 SLC25A44Q96H78 314 aaPredicted RBP3.83□□□□□ -1.8
USP47-204ENST00000525078 OR2A5Q96R48 311 aa3.83□□□□□ -1.8
USP47-204ENST00000525078 C6orf62Q9GZU0 229 aaPredicted RBP3.83□□□□□ -1.8
USP47-204ENST00000525078 NANOGQ9H9S0 305 aa3.83□□□□□ -1.8
USP47-204ENST00000525078 PCYT1BQ9Y5K3 369 aaPredicted RBP3.83□□□□□ -1.8
USP47-204ENST00000525078 MTUS2Q5JR59 1369 aa3.83□□□□□ -1.8
USP47-204ENST00000525078 NPATQ14207 1427 aa3.83□□□□□ -1.8
USP47-204ENST00000525078 CEP164Q9UPV0 1460 aa3.83□□□□□ -1.8
USP47-204ENST00000525078 SCRIBQ14160 1630 aa3.83□□□□□ -1.8
USP47-204ENST00000525078 PCNX3Q9H6A9 2034 aa3.82□□□□□ -1.8
USP47-204ENST00000525078 MIA3Q5JRA6 1907 aa3.82□□□□□ -1.8
USP47-204ENST00000525078 VPS8Q8N3P4 1428 aa3.82□□□□□ -1.8
USP47-204ENST00000525078 A0A1W2PP18 115 aa3.82□□□□□ -1.8
USP47-204ENST00000525078 FAM168BA1KXE4 195 aa3.82□□□□□ -1.8
USP47-204ENST00000525078 PPP5D1E7EU14 171 aa3.82□□□□□ -1.8
USP47-204ENST00000525078 S1PR2O95136 353 aa3.82□□□□□ -1.8
USP47-204ENST00000525078 CXorf1O96002 111 aa3.82□□□□□ -1.8
USP47-204ENST00000525078 CRHP06850 196 aa3.82□□□□□ -1.8
USP47-204ENST00000525078 ADRB3P13945 408 aa3.82□□□□□ -1.8
USP47-204ENST00000525078 NUDT2P50583 147 aa3.82□□□□□ -1.8
USP47-204ENST00000525078 DAZ2Q13117 558 aaKnown RBP3.82□□□□□ -1.8
USP47-204ENST00000525078 C1orf194Q5T5A4 169 aa3.82□□□□□ -1.8
USP47-204ENST00000525078 TEX36Q5VZQ5 186 aa3.82□□□□□ -1.8
USP47-204ENST00000525078 LPCAT3Q6P1A2 487 aa3.82□□□□□ -1.8
USP47-204ENST00000525078 ALKAL1Q6UXT8 129 aa3.82□□□□□ -1.8
USP47-204ENST00000525078 MARCH3Q86UD3 253 aa3.82□□□□□ -1.8
USP47-204ENST00000525078 PCP2Q8IVA1 136 aa3.82□□□□□ -1.8
USP47-204ENST00000525078 C20orf196Q8IYI0 205 aa3.82□□□□□ -1.8
USP47-204ENST00000525078 DEFB125Q8N687 156 aa3.82□□□□□ -1.8
USP47-204ENST00000525078 C12orf29Q8N999 325 aa3.82□□□□□ -1.8
USP47-204ENST00000525078 OR4K5Q8NGD3 323 aa3.82□□□□□ -1.8
USP47-204ENST00000525078 OR2K2Q8NGT1 345 aa3.82□□□□□ -1.8
USP47-204ENST00000525078 OR2T4Q8NH00 348 aa3.82□□□□□ -1.8
USP47-204ENST00000525078 C2orf15Q8WU43 125 aaKnown RBP3.82□□□□□ -1.8
USP47-204ENST00000525078 LINC00477Q96M19 166 aa3.82□□□□□ -1.8
USP47-204ENST00000525078 FAM107BQ9H098 131 aa3.82□□□□□ -1.8
USP47-204ENST00000525078 C12orf10Q9HB07 376 aa3.82□□□□□ -1.8
USP47-204ENST00000525078 DAZ3Q9NR90 486 aaKnown RBP3.82□□□□□ -1.8
USP47-204ENST00000525078 C8orf17Q9NRJ1 99 aa3.82□□□□□ -1.8
USP47-204ENST00000525078 TAS2R1Q9NYW7 299 aa3.82□□□□□ -1.8
USP47-204ENST00000525078 FIS1Q9Y3D6 152 aa3.82□□□□□ -1.8
USP47-204ENST00000525078 SIGLEC1Q9BZZ2 1709 aa3.81□□□□□ -1.8
USP47-204ENST00000525078 WIZO95785 1651 aa3.81□□□□□ -1.8
USP47-204ENST00000525078 MROH2BQ7Z745 1585 aa3.81□□□□□ -1.8
USP47-204ENST00000525078 ERICH3Q5RHP9 1530 aa3.81□□□□□ -1.8
USP47-204ENST00000525078 GRIN2BQ13224 1484 aa3.81□□□□□ -1.8
USP47-204ENST00000525078 PIK3C2GO75747 1445 aa3.81□□□□□ -1.8
USP47-204ENST00000525078 ADAMTS13Q76LX8 1427 aa3.81□□□□□ -1.8
USP47-204ENST00000525078 CARMIL3Q8ND23 1372 aa3.81□□□□□ -1.8
USP47-204ENST00000525078 IGHV3-72A0A0B4J1Y9 119 aa3.81□□□□□ -1.8
USP47-204ENST00000525078 OR11H12B2RN74 326 aa3.81□□□□□ -1.8
USP47-204ENST00000525078 FAAHO00519 579 aa3.81□□□□□ -1.8
USP47-204ENST00000525078 APCSP02743 223 aa3.81□□□□□ -1.8
USP47-204ENST00000525078 SERPINA7P05543 415 aa3.81□□□□□ -1.8
USP47-204ENST00000525078 OR56A5P0C7T3 313 aa3.81□□□□□ -1.8
USP47-204ENST00000525078 IDO1P14902 403 aa3.81□□□□□ -1.8
USP47-204ENST00000525078 GATA2P23769 480 aaPredicted RBP3.81□□□□□ -1.8
USP47-204ENST00000525078 HSPA9P38646 679 aaKnown RBP3.81□□□□□ -1.8
USP47-204ENST00000525078 INPP1P49441 399 aa3.81□□□□□ -1.8
USP47-204ENST00000525078 HERVK_113P63121 156 aa3.81□□□□□ -1.8
USP47-204ENST00000525078 RUNX1Q01196 453 aa3.81□□□□□ -1.8
USP47-204ENST00000525078 CYHR1Q6ZMK1 362 aa3.81□□□□□ -1.8
USP47-204ENST00000525078 TMPPEQ6ZT21 453 aa3.81□□□□□ -1.8
USP47-204ENST00000525078 STX19Q8N4C7 294 aa3.81□□□□□ -1.8
USP47-204ENST00000525078 LINC01555Q8NAE3 123 aa3.81□□□□□ -1.8
USP47-204ENST00000525078 OR2M3Q8NG83 312 aa3.81□□□□□ -1.8
USP47-204ENST00000525078 OR11H1Q8NG94 326 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms