RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 TNFSF12O43508 249 aa11.63□□□□□ -0.55
LDLRAD3-202ENST00000524419 NFYBP25208 207 aa11.63□□□□□ -0.55
LDLRAD3-202ENST00000524419 NKX2-1P43699 371 aaPredicted RBP11.63□□□□□ -0.55
LDLRAD3-202ENST00000524419 EWSR1Q01844 656 aaKnown RBP eCLIP11.63□□□□□ -0.55
LDLRAD3-202ENST00000524419 NHLH2Q02577 135 aa11.63□□□□□ -0.55
LDLRAD3-202ENST00000524419 C1orf185Q5T7R7 199 aa11.63□□□□□ -0.55
LDLRAD3-202ENST00000524419 MBNL2Q5VZF2 373 aaKnown RBP11.63□□□□□ -0.55
LDLRAD3-202ENST00000524419 OR2C3Q8N628 320 aa11.63□□□□□ -0.55
LDLRAD3-202ENST00000524419 LILRB1Q8NHL6 650 aaPredicted RBP11.63□□□□□ -0.55
LDLRAD3-202ENST00000524419 SNIP1Q8TAD8 396 aaKnown RBP11.63□□□□□ -0.55
LDLRAD3-202ENST00000524419 GPHA2Q96T91 129 aa11.63□□□□□ -0.55
LDLRAD3-202ENST00000524419 SMCO4Q9NRQ5 59 aa11.63□□□□□ -0.55
LDLRAD3-202ENST00000524419 FZR1Q9UM11 496 aa11.63□□□□□ -0.55
LDLRAD3-202ENST00000524419 SVILO95425 2214 aa11.62□□□□□ -0.55
LDLRAD3-202ENST00000524419 LOC400499M0QZD8 3231 aa11.62□□□□□ -0.55
LDLRAD3-202ENST00000524419 CLEC18AA5D8T8 446 aa11.62□□□□□ -0.55
LDLRAD3-202ENST00000524419 HSPA12AO43301 675 aa11.62□□□□□ -0.55
LDLRAD3-202ENST00000524419 ADAM20O43506 726 aa11.62□□□□□ -0.55
LDLRAD3-202ENST00000524419 LMO1P25800 156 aa11.62□□□□□ -0.55
LDLRAD3-202ENST00000524419 RAB13P51153 203 aa11.62□□□□□ -0.55
LDLRAD3-202ENST00000524419 FABP6P51161 128 aa11.62□□□□□ -0.55
LDLRAD3-202ENST00000524419 ZNF616Q08AN1 781 aa11.62□□□□□ -0.55
LDLRAD3-202ENST00000524419 GUK1Q16774 197 aa11.62□□□□□ -0.55
LDLRAD3-202ENST00000524419 AVPI1Q5T686 147 aa11.62□□□□□ -0.55
LDLRAD3-202ENST00000524419 LINC00518Q8N0U6 118 aa11.62□□□□□ -0.55
LDLRAD3-202ENST00000524419 PRR18Q8N4B5 295 aa11.62□□□□□ -0.55
LDLRAD3-202ENST00000524419 CLEC18CQ8NCF0 446 aa11.62□□□□□ -0.55
LDLRAD3-202ENST00000524419 AKR1E2Q96JD6 320 aa11.62□□□□□ -0.55
LDLRAD3-202ENST00000524419 SCRT1Q9BWW7 348 aa11.62□□□□□ -0.55
LDLRAD3-202ENST00000524419 WIPI2Q9Y4P8 454 aa11.62□□□□□ -0.55
LDLRAD3-202ENST00000524419 SLC25A15Q9Y619 301 aa11.62□□□□□ -0.55
LDLRAD3-202ENST00000524419 TMEM30CPA0ZSE6 113 aa11.61□□□□□ -0.55
LDLRAD3-202ENST00000524419 MMP9P14780 707 aa11.61□□□□□ -0.55
LDLRAD3-202ENST00000524419 VDAC1P21796 283 aa11.61□□□□□ -0.55
LDLRAD3-202ENST00000524419 F2RP25116 425 aa11.61□□□□□ -0.55
LDLRAD3-202ENST00000524419 MZT1Q08AG7 82 aa11.61□□□□□ -0.55
LDLRAD3-202ENST00000524419 ZNF266Q14584 549 aa11.61□□□□□ -0.55
LDLRAD3-202ENST00000524419 NMSQ5H8A3 153 aa11.61□□□□□ -0.55
LDLRAD3-202ENST00000524419 RXFP4Q8TDU9 374 aa11.61□□□□□ -0.55
LDLRAD3-202ENST00000524419 SLC25A31Q9H0C2 315 aa11.61□□□□□ -0.55
LDLRAD3-202ENST00000524419 PARP12Q9H0J9 701 aaKnown RBP11.61□□□□□ -0.55
LDLRAD3-202ENST00000524419 PLEKHF2Q9H8W4 249 aa11.61□□□□□ -0.55
LDLRAD3-202ENST00000524419 MBNL3Q9NUK0 354 aaKnown RBP11.61□□□□□ -0.55
LDLRAD3-202ENST00000524419 A0A1B0GW64 132 aa11.61□□□□□ -0.55
LDLRAD3-202ENST00000524419 PITX3O75364 302 aa11.61□□□□□ -0.55
LDLRAD3-202ENST00000524419 PRH1P02810 166 aa11.61□□□□□ -0.55
LDLRAD3-202ENST00000524419 HOXA1P49639 335 aaPredicted RBP11.61□□□□□ -0.55
LDLRAD3-202ENST00000524419 CEBPDP49716 269 aaPredicted RBP11.61□□□□□ -0.55
LDLRAD3-202ENST00000524419 PPT1P50897 306 aa11.61□□□□□ -0.55
LDLRAD3-202ENST00000524419 PRAMEF6Q5VXH4 476 aa11.61□□□□□ -0.55
LDLRAD3-202ENST00000524419 Q6ZR03 302 aa11.61□□□□□ -0.55
LDLRAD3-202ENST00000524419 ZNF826PQ6ZT77 177 aa11.61□□□□□ -0.55
LDLRAD3-202ENST00000524419 C11orf53Q8IXP5 236 aa11.61□□□□□ -0.55
LDLRAD3-202ENST00000524419 RBMXL3Q8N7X1 1067 aaKnown RBP11.61□□□□□ -0.55
LDLRAD3-202ENST00000524419 C15orf54Q8N8G6 183 aa11.61□□□□□ -0.55
LDLRAD3-202ENST00000524419 LFNGQ8NES3 379 aa11.61□□□□□ -0.55
LDLRAD3-202ENST00000524419 PBDC1Q9BVG4 233 aa11.61□□□□□ -0.55
LDLRAD3-202ENST00000524419 SH3BGRL3Q9H299 93 aa11.61□□□□□ -0.55
LDLRAD3-202ENST00000524419 BIN3Q9NQY0 253 aa11.61□□□□□ -0.55
LDLRAD3-202ENST00000524419 KCNIP1Q9NZI2 227 aa11.61□□□□□ -0.55
LDLRAD3-202ENST00000524419 KCNS2Q9ULS6 477 aa11.61□□□□□ -0.55
LDLRAD3-202ENST00000524419 FAM215AQ9Y5M1 114 aa11.61□□□□□ -0.55
LDLRAD3-202ENST00000524419 HEATR1Q9H583 2144 aaKnown RBP11.6□□□□□ -0.55
LDLRAD3-202ENST00000524419 MEX3AA1L020 520 aaKnown RBP11.6□□□□□ -0.55
LDLRAD3-202ENST00000524419 FAM24AA6NFZ4 105 aa11.6□□□□□ -0.55
LDLRAD3-202ENST00000524419 COLCA2A8K830 154 aa11.6□□□□□ -0.55
LDLRAD3-202ENST00000524419 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.6□□□□□ -0.55
LDLRAD3-202ENST00000524419 WNT9BO14905 357 aa11.6□□□□□ -0.55
LDLRAD3-202ENST00000524419 SSSCA1O60232 199 aa11.6□□□□□ -0.55
LDLRAD3-202ENST00000524419 CRYBA1P05813 215 aa11.6□□□□□ -0.55
LDLRAD3-202ENST00000524419 SERPINE2P07093 398 aa11.6□□□□□ -0.55
LDLRAD3-202ENST00000524419 WNT2P09544 360 aa11.6□□□□□ -0.55
LDLRAD3-202ENST00000524419 FOLR2P14207 255 aa11.6□□□□□ -0.55
LDLRAD3-202ENST00000524419 VAMP2P63027 116 aa11.6□□□□□ -0.55
LDLRAD3-202ENST00000524419 TESK1Q15569 626 aa11.6□□□□□ -0.55
LDLRAD3-202ENST00000524419 ACP7Q6ZNF0 438 aa11.6□□□□□ -0.55
LDLRAD3-202ENST00000524419 HSD17B11Q8NBQ5 300 aa11.6□□□□□ -0.55
LDLRAD3-202ENST00000524419 OR51H1Q8NH63 302 aa11.6□□□□□ -0.55
LDLRAD3-202ENST00000524419 MSL2Q9HCI7 577 aa11.6□□□□□ -0.55
LDLRAD3-202ENST00000524419 LYRM2Q9NU23 88 aaPredicted RBP11.6□□□□□ -0.55
LDLRAD3-202ENST00000524419 RBM7Q9Y580 266 aaKnown RBP11.6□□□□□ -0.55
LDLRAD3-202ENST00000524419 K7N7A8 449 aa11.59□□□□□ -0.55
LDLRAD3-202ENST00000524419 ZNF83P51522 516 aa11.59□□□□□ -0.55
LDLRAD3-202ENST00000524419 POLR2GP62487 172 aaKnown RBP eCLIP11.59□□□□□ -0.55
LDLRAD3-202ENST00000524419 SMIM21Q3B7S5 101 aa11.59□□□□□ -0.55
LDLRAD3-202ENST00000524419 WDR82Q6UXN9 313 aa11.59□□□□□ -0.55
LDLRAD3-202ENST00000524419 PRR7Q8TB68 274 aa11.59□□□□□ -0.55
LDLRAD3-202ENST00000524419 EGLN1Q9GZT9 426 aa11.59□□□□□ -0.55
LDLRAD3-202ENST00000524419 SMDT1Q9H4I9 107 aa11.59□□□□□ -0.55
LDLRAD3-202ENST00000524419 UFSP2Q9NUQ7 469 aa11.59□□□□□ -0.55
LDLRAD3-202ENST00000524419 PRR14LQ5THK1 2151 aa11.59□□□□□ -0.55
LDLRAD3-202ENST00000524419 AKAP13Q12802 2813 aa11.59□□□□□ -0.55
LDLRAD3-202ENST00000524419 IGSF23A1L1A6 192 aa11.59□□□□□ -0.55
LDLRAD3-202ENST00000524419 UMAD1C9J7I0 102 aa11.59□□□□□ -0.55
LDLRAD3-202ENST00000524419 ID3Q02535 119 aa11.59□□□□□ -0.55
LDLRAD3-202ENST00000524419 TIMM23BQ5SRD1 257 aa11.59□□□□□ -0.55
LDLRAD3-202ENST00000524419 SLC35E4Q6ICL7 350 aa11.59□□□□□ -0.55
LDLRAD3-202ENST00000524419 TMEM252Q8N6L7 170 aa11.59□□□□□ -0.55
LDLRAD3-202ENST00000524419 UBALD1Q8TB05 177 aa11.59□□□□□ -0.55
LDLRAD3-202ENST00000524419 S100PBPQ96BU1 408 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms