RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 OR4A15Q8NGL6 344 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 ENKURQ8TC29 256 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 ABHD3Q8WU67 409 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 SRSF12Q8WXF0 261 aaKnown RBP3.73□□□□□ -1.81
SKP1-213ENST00000524288 NAT6Q93015 286 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 MRGPRFQ96AM1 343 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 GALNT14Q96FL9 552 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 PDXPQ96GD0 296 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 HYLS1Q96M11 299 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 ZNF681Q96N22 645 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 OR2A5Q96R48 311 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 KCNS3Q9BQ31 491 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 TSSK6Q9BXA6 273 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 SAV1Q9H4B6 383 aaPredicted RBP3.73□□□□□ -1.81
SKP1-213ENST00000524288 ABCB9Q9NP78 766 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 EMC3Q9P0I2 261 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 VPS29Q9UBQ0 182 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 CTSFQ9UBX1 484 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 KPTNQ9Y664 436 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 ALG5Q9Y673 324 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 HEATR5BQ9P2D3 2071 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 TICRRQ7Z2Z1 1910 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 A0A1B0GVX0 72 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 A0A1W2PQ67 120 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 A0A1W2PQL4 384 aaPredicted RBP3.72□□□□□ -1.81
SKP1-213ENST00000524288 OR6C74A6NCV1 312 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 LEUTXA8MZ59 168 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 M0R129 80 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 FFAR1O14842 300 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 MYL12BO14950 172 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 LYRM1O43325 122 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 ORC5O43913 435 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 NOS1APO75052 506 aaPredicted RBP3.72□□□□□ -1.81
SKP1-213ENST00000524288 OR2B3O76000 313 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 CPSF4O95639 269 aaKnown RBP3.72□□□□□ -1.81
SKP1-213ENST00000524288 HPRT1P00492 218 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 OR56A5P0C7T3 313 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 PGA4P0DJD7 388 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 PGA3P0DJD8 388 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 PGA5P0DJD9 388 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 PRKACAP17612 351 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 MYL12AP19105 171 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 MAGP20916 626 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 MSR1P21757 451 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 CCR7P32248 378 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 EVX1P49640 407 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 CLDN18P56856 261 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 CARD18P57730 90 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 PRR3P79522 188 aaKnown RBP3.72□□□□□ -1.81
SKP1-213ENST00000524288 HOXC5Q00444 222 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 CDK6Q00534 326 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 C2orf80Q0P641 193 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 DMC1Q14565 340 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 SHHQ15465 462 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 DEFB116Q30KQ4 102 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 CLLU1OSQ5K130 101 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 ULK3Q6PHR2 472 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 FAM131AQ6UXB0 335 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 ZFP2Q6ZN57 461 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 IQCF2Q8IXL9 164 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 CYB561D1Q8N8Q1 229 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 COX18Q8N8Q8 333 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 C11orf72Q8NBR9 251 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 TMEM104Q8NE00 496 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 OR4M2Q8NGB6 313 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 OR11H7Q8NGC8 314 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 OR5H6Q8NGV6 325 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 OR5W2Q8NH69 310 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 DEDD2Q8WXF8 326 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 ACOT12Q8WYK0 555 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 NEURL3Q96EH8 262 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 KCTD7Q96MP8 289 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 ZNF285Q96NJ3 590 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 C7orf50Q9BRJ6 194 aaKnown RBP3.72□□□□□ -1.81
SKP1-213ENST00000524288 TMEM175Q9BSA9 504 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 EBPLQ9BY08 206 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 ZNF717Q9BY31 904 aaPredicted RBP3.72□□□□□ -1.81
SKP1-213ENST00000524288 MED9Q9NWA0 146 aa3.72□□□□□ -1.81
SKP1-213ENST00000524288 NDRG2Q9UN36 371 aaKnown RBP3.72□□□□□ -1.81
SKP1-213ENST00000524288 SMIM26A0A096LP01 95 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 FABP12A6NFH5 140 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 OR6C70A6NIJ9 312 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 E7EQ34 232 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 RGS5O15539 181 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 COCHO43405 550 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 XRCC2O43543 280 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 CHP2O43745 196 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 CDC40O60508 579 aaKnown RBP eCLIP3.71□□□□□ -1.82
SKP1-213ENST00000524288 SLC22A5O76082 557 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 CDRT1O95170 752 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 ETHE1O95571 254 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 SOD1P00441 154 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 OPN1SWP03999 348 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 HOXC4P09017 264 aaPredicted RBP3.71□□□□□ -1.82
SKP1-213ENST00000524288 TSPAN19P0C672 248 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 HMGA1P17096 107 aaKnown RBP3.71□□□□□ -1.82
SKP1-213ENST00000524288 RAB3AP20336 220 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 SLC6A1P30531 599 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 SSTR5P35346 364 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 CFHR2P36980 270 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms