RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 TRAPPC2LH3BP13 241 aa8.76□□□□□ -1.01
SPIDR-225ENST00000524141 CBR3O75828 277 aa8.76□□□□□ -1.01
SPIDR-225ENST00000524141 CCL3P10147 92 aa8.76□□□□□ -1.01
SPIDR-225ENST00000524141 NUBP1P53384 320 aa8.76□□□□□ -1.01
SPIDR-225ENST00000524141 RPL23P62829 140 aaKnown RBP8.76□□□□□ -1.01
SPIDR-225ENST00000524141 PCSK4Q6UW60 755 aa8.76□□□□□ -1.01
SPIDR-225ENST00000524141 C5orf24Q7Z6I8 188 aa8.76□□□□□ -1.01
SPIDR-225ENST00000524141 MKXQ8IYA7 352 aa8.76□□□□□ -1.01
SPIDR-225ENST00000524141 BATF2Q8N1L9 274 aa8.76□□□□□ -1.01
SPIDR-225ENST00000524141 SMRP1Q8NCR6 262 aa8.76□□□□□ -1.01
SPIDR-225ENST00000524141 TAF15Q92804 592 aaKnown RBP eCLIP8.76□□□□□ -1.01
SPIDR-225ENST00000524141 MANBALQ9NQG1 85 aa8.76□□□□□ -1.01
SPIDR-225ENST00000524141 TNRC6BQ9UPQ9 1833 aaKnown RBP8.75□□□□□ -1.01
SPIDR-225ENST00000524141 IL18BPO95998 194 aa8.75□□□□□ -1.01
SPIDR-225ENST00000524141 TYMSP04818 313 aa8.75□□□□□ -1.01
SPIDR-225ENST00000524141 SNRPCP09234 159 aaKnown RBP8.75□□□□□ -1.01
SPIDR-225ENST00000524141 IAPPP10997 89 aa8.75□□□□□ -1.01
SPIDR-225ENST00000524141 HOXA6P31267 233 aa8.75□□□□□ -1.01
SPIDR-225ENST00000524141 SRP14P37108 136 aaKnown RBP8.75□□□□□ -1.01
SPIDR-225ENST00000524141 ERVS71-1P61550 626 aa8.75□□□□□ -1.01
SPIDR-225ENST00000524141 P2RY6Q15077 328 aa8.75□□□□□ -1.01
SPIDR-225ENST00000524141 PCOLCEQ15113 449 aa8.75□□□□□ -1.01
SPIDR-225ENST00000524141 CEACAM16Q2WEN9 425 aa8.75□□□□□ -1.01
SPIDR-225ENST00000524141 KIAA2026Q5HYC2 2103 aa8.75□□□□□ -1.01
SPIDR-225ENST00000524141 ACTL10Q5JWF8 245 aa8.75□□□□□ -1.01
SPIDR-225ENST00000524141 ZNF324BQ6AW86 544 aaPredicted RBP8.75□□□□□ -1.01
SPIDR-225ENST00000524141 FAM180AQ6UWF9 173 aa8.75□□□□□ -1.01
SPIDR-225ENST00000524141 CISD2Q8N5K1 135 aaKnown RBP8.75□□□□□ -1.01
SPIDR-225ENST00000524141 NECAP1Q8NC96 275 aa8.75□□□□□ -1.01
SPIDR-225ENST00000524141 WASF3Q9UPY6 502 aa8.75□□□□□ -1.01
SPIDR-225ENST00000524141 SZT2Q5T011 3432 aa8.75□□□□□ -1.01
SPIDR-225ENST00000524141 DEGS1O15121 323 aa8.75□□□□□ -1.01
SPIDR-225ENST00000524141 GGCTO75223 188 aaKnown RBP8.75□□□□□ -1.01
SPIDR-225ENST00000524141 VENTXO95231 258 aa8.75□□□□□ -1.01
SPIDR-225ENST00000524141 MBP02144 154 aa8.75□□□□□ -1.01
SPIDR-225ENST00000524141 SSR4P51571 173 aa8.75□□□□□ -1.01
SPIDR-225ENST00000524141 ELLP55199 621 aaPredicted RBP8.75□□□□□ -1.01
SPIDR-225ENST00000524141 ARL16Q0P5N6 197 aa8.75□□□□□ -1.01
SPIDR-225ENST00000524141 PRDX4Q13162 271 aa8.75□□□□□ -1.01
SPIDR-225ENST00000524141 KCNIP4Q6PIL6 250 aa8.75□□□□□ -1.01
SPIDR-225ENST00000524141 MRPL41Q8IXM3 137 aaKnown RBP8.75□□□□□ -1.01
SPIDR-225ENST00000524141 OR56B2PQ8NGI1 322 aa8.75□□□□□ -1.01
SPIDR-225ENST00000524141 OR2T10Q8NGZ9 312 aa8.75□□□□□ -1.01
SPIDR-225ENST00000524141 MRPL30Q8TCC3 161 aaKnown RBP8.75□□□□□ -1.01
SPIDR-225ENST00000524141 KCNE4Q8WWG9 221 aa8.75□□□□□ -1.01
SPIDR-225ENST00000524141 RPUSD4Q96CM3 377 aaKnown RBP8.75□□□□□ -1.01
SPIDR-225ENST00000524141 STRADBQ9C0K7 418 aa8.75□□□□□ -1.01
SPIDR-225ENST00000524141 WDR54Q9H977 334 aa8.75□□□□□ -1.01
SPIDR-225ENST00000524141 LIN7CQ9NUP9 197 aaKnown RBP8.75□□□□□ -1.01
SPIDR-225ENST00000524141 RANBP2P49792 3224 aaKnown RBP8.75□□□□□ -1.01
SPIDR-225ENST00000524141 LOC102723996A0A087X1L8 192 aa8.74□□□□□ -1.01
SPIDR-225ENST00000524141 CTXND1A0A1B0GTU2 59 aa8.74□□□□□ -1.01
SPIDR-225ENST00000524141 A0A1W2PPQ1 181 aa8.74□□□□□ -1.01
SPIDR-225ENST00000524141 LRRC3CA6NJW4 275 aa8.74□□□□□ -1.01
SPIDR-225ENST00000524141 ZNF716A6NP11 495 aa8.74□□□□□ -1.01
SPIDR-225ENST00000524141 B4E171 279 aa8.74□□□□□ -1.01
SPIDR-225ENST00000524141 FAM90A26D6RGX4 464 aa8.74□□□□□ -1.01
SPIDR-225ENST00000524141 HSPB6O14558 160 aa8.74□□□□□ -1.01
SPIDR-225ENST00000524141 TSPAN7P41732 249 aa8.74□□□□□ -1.01
SPIDR-225ENST00000524141 CARD18P57730 90 aa8.74□□□□□ -1.01
SPIDR-225ENST00000524141 LCN2P80188 198 aa8.74□□□□□ -1.01
SPIDR-225ENST00000524141 PAX5Q02548 391 aa8.74□□□□□ -1.01
SPIDR-225ENST00000524141 CEACAM21Q3KPI0 293 aa8.74□□□□□ -1.01
SPIDR-225ENST00000524141 NRN1LQ496H8 165 aa8.74□□□□□ -1.01
SPIDR-225ENST00000524141 MRPL14Q6P1L8 145 aaKnown RBP8.74□□□□□ -1.01
SPIDR-225ENST00000524141 Q6ZRM9 215 aa8.74□□□□□ -1.01
SPIDR-225ENST00000524141 COLCA1Q6ZS62 124 aa8.74□□□□□ -1.01
SPIDR-225ENST00000524141 HAPLN4Q86UW8 402 aa8.74□□□□□ -1.01
SPIDR-225ENST00000524141 ZDHHC23Q8IYP9 409 aa8.74□□□□□ -1.01
SPIDR-225ENST00000524141 OR10V1Q8NGI7 309 aa8.74□□□□□ -1.01
SPIDR-225ENST00000524141 PSMF1Q92530 271 aa8.74□□□□□ -1.01
SPIDR-225ENST00000524141 OR4C12Q96R67 309 aa8.74□□□□□ -1.01
SPIDR-225ENST00000524141 PCGF1Q9BSM1 259 aa8.74□□□□□ -1.01
SPIDR-225ENST00000524141 PARLQ9H300 379 aa8.74□□□□□ -1.01
SPIDR-225ENST00000524141 PROK2Q9HC23 129 aa8.74□□□□□ -1.01
SPIDR-225ENST00000524141 BRWD1Q9NSI6 2320 aa8.74□□□□□ -1.01
SPIDR-225ENST00000524141 CEP192Q8TEP8 1941 aa8.74□□□□□ -1.01
SPIDR-225ENST00000524141 NPIPB11E5RHQ5 1161 aa8.74□□□□□ -1.01
SPIDR-225ENST00000524141 GZMHP20718 246 aa8.74□□□□□ -1.01
SPIDR-225ENST00000524141 APLNRP35414 380 aa8.74□□□□□ -1.01
SPIDR-225ENST00000524141 GPM6AP51674 278 aa8.74□□□□□ -1.01
SPIDR-225ENST00000524141 SLC38A11Q08AI6 406 aa8.74□□□□□ -1.01
SPIDR-225ENST00000524141 RPP25LQ8N5L8 163 aaKnown RBP8.74□□□□□ -1.01
SPIDR-225ENST00000524141 GPR35Q9HC97 309 aa8.74□□□□□ -1.01
SPIDR-225ENST00000524141 TMEM9BQ9NQ34 198 aa8.74□□□□□ -1.01
SPIDR-225ENST00000524141 OR6C3Q9NZP0 311 aa8.74□□□□□ -1.01
SPIDR-225ENST00000524141 ERRFI1Q9UJM3 462 aaPredicted RBP8.74□□□□□ -1.01
SPIDR-225ENST00000524141 FUT9Q9Y231 359 aa8.74□□□□□ -1.01
SPIDR-225ENST00000524141 UBE2L5PA0A1B0GUS4 154 aa8.73□□□□□ -1.01
SPIDR-225ENST00000524141 MMP7P09237 267 aaPredicted RBP8.73□□□□□ -1.01
SPIDR-225ENST00000524141 NTF4P34130 210 aa8.73□□□□□ -1.01
SPIDR-225ENST00000524141 LTBRP36941 435 aa8.73□□□□□ -1.01
SPIDR-225ENST00000524141 SPANXN5Q5MJ07 72 aa8.73□□□□□ -1.01
SPIDR-225ENST00000524141 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.73□□□□□ -1.01
SPIDR-225ENST00000524141 REPIN1Q9BWE0 567 aaKnown RBP8.73□□□□□ -1.01
SPIDR-225ENST00000524141 SH2D2AQ9NP31 389 aa8.73□□□□□ -1.01
SPIDR-225ENST00000524141 IGHV1-45A0A0A0MS14 117 aa8.73□□□□□ -1.01
SPIDR-225ENST00000524141 IGKV1-39P01597 117 aa8.73□□□□□ -1.01
SPIDR-225ENST00000524141 IGKV1D-39P04432 117 aa8.73□□□□□ -1.01
SPIDR-225ENST00000524141 FGF5P12034 268 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms