RNA–Protein interactions for RNA: ENST00000522515.5

LSM1-204, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 1,568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-204ENST00000522515 PPP5CP53041 499 aa13.29□□□□□ -0.28
LSM1-204ENST00000522515 ARPC4P59998 168 aa13.29□□□□□ -0.28
LSM1-204ENST00000522515 KLRD1Q13241 179 aa13.29□□□□□ -0.28
LSM1-204ENST00000522515 CHRFAM7AQ494W8 412 aa13.29□□□□□ -0.28
LSM1-204ENST00000522515 OR10V1Q8NGI7 309 aa13.29□□□□□ -0.28
LSM1-204ENST00000522515 OR52M1Q8NGK5 317 aa13.29□□□□□ -0.28
LSM1-204ENST00000522515 UPRTQ96BW1 309 aa13.29□□□□□ -0.28
LSM1-204ENST00000522515 WDR12Q9GZL7 423 aaKnown RBP13.29□□□□□ -0.28
LSM1-204ENST00000522515 TMEM133Q9H2Q1 129 aa13.29□□□□□ -0.28
LSM1-204ENST00000522515 GFOD1Q9NXC2 390 aa13.29□□□□□ -0.28
LSM1-204ENST00000522515 GNG12Q9UBI6 72 aa13.29□□□□□ -0.28
LSM1-204ENST00000522515 TRBV6-7A0A0A0MS04 114 aa13.28□□□□□ -0.28
LSM1-204ENST00000522515 RNASEK-C17orf49H0YIS7 233 aa13.28□□□□□ -0.28
LSM1-204ENST00000522515 PMP2P02689 132 aa13.28□□□□□ -0.28
LSM1-204ENST00000522515 HOXB4P17483 251 aaPredicted RBP13.28□□□□□ -0.28
LSM1-204ENST00000522515 PPP1CCP36873 323 aaKnown RBP13.28□□□□□ -0.28
LSM1-204ENST00000522515 RFX2P48378 723 aa13.28□□□□□ -0.28
LSM1-204ENST00000522515 HCP5Q6MZN7 132 aa13.28□□□□□ -0.28
LSM1-204ENST00000522515 PDZD9Q8IXQ8 264 aa13.28□□□□□ -0.28
LSM1-204ENST00000522515 TSC22D3Q99576 134 aa13.28□□□□□ -0.28
LSM1-204ENST00000522515 YAE1D1Q9NRH1 226 aa13.28□□□□□ -0.28
LSM1-204ENST00000522515 JPT1Q9UK76 154 aa13.28□□□□□ -0.28
LSM1-204ENST00000522515 A0A087X0M5 115 aa13.28□□□□□ -0.28
LSM1-204ENST00000522515 A0A1B0GX30 115 aa13.28□□□□□ -0.28
LSM1-204ENST00000522515 ANKRD20A5PA0PJZ0 165 aa13.28□□□□□ -0.28
LSM1-204ENST00000522515 ZNF736B4DX44 427 aaPredicted RBP13.28□□□□□ -0.28
LSM1-204ENST00000522515 HSPA12AO43301 675 aa13.28□□□□□ -0.28
LSM1-204ENST00000522515 CD3DP04234 171 aa13.28□□□□□ -0.28
LSM1-204ENST00000522515 ZBTB25P24278 435 aa13.28□□□□□ -0.28
LSM1-204ENST00000522515 COX7A1P24310 79 aa13.28□□□□□ -0.28
LSM1-204ENST00000522515 CD40LGP29965 261 aa13.28□□□□□ -0.28
LSM1-204ENST00000522515 HRH1P35367 487 aa13.28□□□□□ -0.28
LSM1-204ENST00000522515 CEACAM6P40199 344 aa13.28□□□□□ -0.28
LSM1-204ENST00000522515 TMEM30BQ3MIR4 351 aa13.28□□□□□ -0.28
LSM1-204ENST00000522515 MORN2Q502X0 79 aa13.28□□□□□ -0.28
LSM1-204ENST00000522515 STEAP3Q658P3 488 aa13.28□□□□□ -0.28
LSM1-204ENST00000522515 PNKDQ8N490 385 aa13.28□□□□□ -0.28
LSM1-204ENST00000522515 TMEM229BQ8NBD8 167 aa13.28□□□□□ -0.28
LSM1-204ENST00000522515 OR10J5Q8NHC4 309 aa13.28□□□□□ -0.28
LSM1-204ENST00000522515 LHX4Q969G2 390 aa13.28□□□□□ -0.28
LSM1-204ENST00000522515 HEXA-AS1Q9H8Q6 139 aa13.28□□□□□ -0.28
LSM1-204ENST00000522515 NECAP2Q9NVZ3 263 aa13.28□□□□□ -0.28
LSM1-204ENST00000522515 TAS2R8Q9NYW2 309 aa13.28□□□□□ -0.28
LSM1-204ENST00000522515 IGHV2-26A0A0B4J1V2 119 aa13.27□□□□□ -0.29
LSM1-204ENST00000522515 CENPVL3A0A0U1RRI6 287 aa13.27□□□□□ -0.29
LSM1-204ENST00000522515 A8MV72 311 aaPredicted RBP13.27□□□□□ -0.29
LSM1-204ENST00000522515 M0QYG6 137 aa13.27□□□□□ -0.29
LSM1-204ENST00000522515 DIRAS3O95661 229 aa13.27□□□□□ -0.29
LSM1-204ENST00000522515 CSF1P09603 554 aa13.27□□□□□ -0.29
LSM1-204ENST00000522515 CTXN2P0C2S0 81 aa13.27□□□□□ -0.29
LSM1-204ENST00000522515 IL7P13232 177 aa13.27□□□□□ -0.29
LSM1-204ENST00000522515 OR3A3P47888 321 aa13.27□□□□□ -0.29
LSM1-204ENST00000522515 TAS2R46P59540 309 aa13.27□□□□□ -0.29
LSM1-204ENST00000522515 TAS2R19P59542 299 aa13.27□□□□□ -0.29
LSM1-204ENST00000522515 CDK10Q15131 360 aa13.27□□□□□ -0.29
LSM1-204ENST00000522515 OVCH2Q7RTZ1 564 aa13.27□□□□□ -0.29
LSM1-204ENST00000522515 ABHD12Q8N2K0 398 aa13.27□□□□□ -0.29
LSM1-204ENST00000522515 OR13D1Q8NGV5 346 aa13.27□□□□□ -0.29
LSM1-204ENST00000522515 OR5H2Q8NGV7 314 aa13.27□□□□□ -0.29
LSM1-204ENST00000522515 CCDC32Q9BV29 185 aa13.27□□□□□ -0.29
LSM1-204ENST00000522515 PARP12Q9H0J9 701 aaKnown RBP13.27□□□□□ -0.29
LSM1-204ENST00000522515 ZNF107Q9UII5 783 aaPredicted RBP13.27□□□□□ -0.29
LSM1-204ENST00000522515 PSG11Q9UQ72 335 aa13.27□□□□□ -0.29
LSM1-204ENST00000522515 TLN2Q9Y4G6 2542 aa13.26□□□□□ -0.29
LSM1-204ENST00000522515 TRAV40A0A0B4J280 105 aa13.26□□□□□ -0.29
LSM1-204ENST00000522515 A0A1W2PPE3 182 aa13.26□□□□□ -0.29
LSM1-204ENST00000522515 YPEL1O60688 119 aa13.26□□□□□ -0.29
LSM1-204ENST00000522515 OR5H8P0DN80 308 aa13.26□□□□□ -0.29
LSM1-204ENST00000522515 CD34P28906 385 aa13.26□□□□□ -0.29
LSM1-204ENST00000522515 GNG10P50151 68 aa13.26□□□□□ -0.29
LSM1-204ENST00000522515 ZNF134P52741 427 aa13.26□□□□□ -0.29
LSM1-204ENST00000522515 KLF17Q5JT82 389 aaPredicted RBP13.26□□□□□ -0.29
LSM1-204ENST00000522515 TRIQKQ629K1 86 aa13.26□□□□□ -0.29
LSM1-204ENST00000522515 NCR3LG1Q68D85 454 aa13.26□□□□□ -0.29
LSM1-204ENST00000522515 STEAP1BQ6NZ63 245 aa13.26□□□□□ -0.29
LSM1-204ENST00000522515 CLEC9AQ6UXN8 241 aa13.26□□□□□ -0.29
LSM1-204ENST00000522515 ZNF439Q8NDP4 499 aa13.26□□□□□ -0.29
LSM1-204ENST00000522515 OR4D10Q8NGI6 311 aa13.26□□□□□ -0.29
LSM1-204ENST00000522515 YPEL2Q96QA6 119 aa13.26□□□□□ -0.29
LSM1-204ENST00000522515 GINS4Q9BRT9 223 aa13.26□□□□□ -0.29
LSM1-204ENST00000522515 CLEC7AQ9BXN2 247 aa13.26□□□□□ -0.29
LSM1-204ENST00000522515 TINAGL1Q9GZM7 467 aaPredicted RBP13.26□□□□□ -0.29
LSM1-204ENST00000522515 GSX1Q9H4S2 264 aaPredicted RBP13.26□□□□□ -0.29
LSM1-204ENST00000522515 EHFQ9NZC4 300 aa13.26□□□□□ -0.29
LSM1-204ENST00000522515 MAST4O15021 2626 aa13.26□□□□□ -0.29
LSM1-204ENST00000522515 IGHV3OR16-10A0A075B7F0 116 aa13.25□□□□□ -0.29
LSM1-204ENST00000522515 A0A1W2PRD5 423 aa13.25□□□□□ -0.29
LSM1-204ENST00000522515 A0A1W2PRF3 423 aa13.25□□□□□ -0.29
LSM1-204ENST00000522515 A0A1W2PRM7 423 aa13.25□□□□□ -0.29
LSM1-204ENST00000522515 CD74P04233 296 aa13.25□□□□□ -0.29
LSM1-204ENST00000522515 IGHV4-38-2P0DP08 117 aa13.25□□□□□ -0.29
LSM1-204ENST00000522515 NFYAP23511 347 aaPredicted RBP13.25□□□□□ -0.29
LSM1-204ENST00000522515 DYRK1AQ13627 763 aa13.25□□□□□ -0.29
LSM1-204ENST00000522515 KLF9Q13886 244 aaPredicted RBP13.25□□□□□ -0.29
LSM1-204ENST00000522515 RNASE10Q5GAN6 216 aaKnown RBP13.25□□□□□ -0.29
LSM1-204ENST00000522515 FAAP20Q6NZ36 180 aa13.25□□□□□ -0.29
LSM1-204ENST00000522515 H1FOOQ8IZA3 346 aaPredicted RBP13.25□□□□□ -0.29
LSM1-204ENST00000522515 TOMM5Q8N4H5 51 aa13.25□□□□□ -0.29
LSM1-204ENST00000522515 OR11H6Q8NGC7 330 aa13.25□□□□□ -0.29
LSM1-204ENST00000522515 TOLLIPQ9H0E2 274 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms