RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 SNX22Q96L94 193 aa11.99□□□□□ -0.49
SYNPO-205ENST00000522122 RNF122Q9H9V4 155 aa11.99□□□□□ -0.49
SYNPO-205ENST00000522122 TMEM167BQ9NRX6 74 aa11.99□□□□□ -0.49
SYNPO-205ENST00000522122 TMEM14DPA8MWL7 114 aa11.99□□□□□ -0.49
SYNPO-205ENST00000522122 FBXW9Q5XUX1 488 aa11.99□□□□□ -0.49
SYNPO-205ENST00000522122 ATRAIDQ6UW56 229 aa11.99□□□□□ -0.49
SYNPO-205ENST00000522122 YTHDF2Q9Y5A9 579 aaKnown RBP11.99□□□□□ -0.49
SYNPO-205ENST00000522122 TMEM265A0A087WTH1 108 aa11.99□□□□□ -0.49
SYNPO-205ENST00000522122 RBP4P02753 201 aa11.99□□□□□ -0.49
SYNPO-205ENST00000522122 PRF1P14222 555 aa11.99□□□□□ -0.49
SYNPO-205ENST00000522122 FCER1GP30273 86 aa11.99□□□□□ -0.49
SYNPO-205ENST00000522122 SPEM2Q0P670 501 aa11.99□□□□□ -0.49
SYNPO-205ENST00000522122 HSD17B10Q99714 261 aaKnown RBP11.99□□□□□ -0.49
SYNPO-205ENST00000522122 MIOXQ9UGB7 285 aa11.99□□□□□ -0.49
SYNPO-205ENST00000522122 PLXNA4Q9HCM2 1894 aa11.98□□□□□ -0.49
SYNPO-205ENST00000522122 A0A087WV48 116 aa11.98□□□□□ -0.49
SYNPO-205ENST00000522122 OR5H1A6NKK0 313 aa11.98□□□□□ -0.49
SYNPO-205ENST00000522122 PITX3O75364 302 aa11.98□□□□□ -0.49
SYNPO-205ENST00000522122 RPL29P47914 159 aaKnown RBP11.98□□□□□ -0.49
SYNPO-205ENST00000522122 ZNF880Q6PDB4 577 aa11.98□□□□□ -0.49
SYNPO-205ENST00000522122 SLC25A28Q96A46 364 aa11.98□□□□□ -0.49
SYNPO-205ENST00000522122 RPEQ96AT9 228 aa11.98□□□□□ -0.49
SYNPO-205ENST00000522122 CLEC1BQ9P126 229 aa11.98□□□□□ -0.49
SYNPO-205ENST00000522122 CTXND1A0A1B0GTU2 59 aa11.98□□□□□ -0.49
SYNPO-205ENST00000522122 PAGE4O60829 102 aa11.98□□□□□ -0.49
SYNPO-205ENST00000522122 RPEL1Q2QD12 228 aa11.98□□□□□ -0.49
SYNPO-205ENST00000522122 WDR73Q6P4I2 378 aa11.98□□□□□ -0.49
SYNPO-205ENST00000522122 SLC25A40Q8TBP6 338 aa11.98□□□□□ -0.49
SYNPO-205ENST00000522122 IL22RA2Q969J5 263 aa11.98□□□□□ -0.49
SYNPO-205ENST00000522122 WDR61Q9GZS3 305 aaKnown RBP11.98□□□□□ -0.49
SYNPO-205ENST00000522122 RNF24Q9Y225 148 aa11.98□□□□□ -0.49
SYNPO-205ENST00000522122 PATE3B3GLJ2 98 aa11.98□□□□□ -0.49
SYNPO-205ENST00000522122 CRISP2P16562 243 aa11.98□□□□□ -0.49
SYNPO-205ENST00000522122 FA2HQ7L5A8 372 aa11.98□□□□□ -0.49
SYNPO-205ENST00000522122 POC1AQ8NBT0 407 aa11.98□□□□□ -0.49
SYNPO-205ENST00000522122 ANGPTL4Q9BY76 406 aa11.98□□□□□ -0.49
SYNPO-205ENST00000522122 AAMDCQ9H7C9 122 aa11.98□□□□□ -0.49
SYNPO-205ENST00000522122 G6PCP35575 357 aa11.98□□□□□ -0.49
SYNPO-205ENST00000522122 IGSF11Q5DX21 431 aa11.98□□□□□ -0.49
SYNPO-205ENST00000522122 OR1L4Q8NGR5 311 aa11.98□□□□□ -0.49
SYNPO-205ENST00000522122 VSTM2AQ8TAG5 236 aa11.98□□□□□ -0.49
SYNPO-205ENST00000522122 OR10C1Q96KK4 312 aa11.98□□□□□ -0.49
SYNPO-205ENST00000522122 TECRQ9NZ01 308 aaKnown RBP11.98□□□□□ -0.49
SYNPO-205ENST00000522122 NPIPB13A6NJU9 1138 aa11.97□□□□□ -0.49
SYNPO-205ENST00000522122 NPIPB4C9JG80 1138 aa11.97□□□□□ -0.49
SYNPO-205ENST00000522122 TOX4O94842 621 aa11.97□□□□□ -0.49
SYNPO-205ENST00000522122 MPZP25189 248 aa11.97□□□□□ -0.49
SYNPO-205ENST00000522122 SERF2P84101 59 aa11.97□□□□□ -0.49
SYNPO-205ENST00000522122 RUNX1Q01196 453 aa11.97□□□□□ -0.49
SYNPO-205ENST00000522122 TMEM183BQ1AE95 376 aa11.97□□□□□ -0.49
SYNPO-205ENST00000522122 DCAF10Q5QP82 559 aa11.97□□□□□ -0.49
SYNPO-205ENST00000522122 H1FOOQ8IZA3 346 aaPredicted RBP11.97□□□□□ -0.49
SYNPO-205ENST00000522122 MRPL30Q8TCC3 161 aaKnown RBP11.97□□□□□ -0.49
SYNPO-205ENST00000522122 DOK5Q9P104 306 aa11.97□□□□□ -0.49
SYNPO-205ENST00000522122 AMTP48728 403 aa11.97□□□□□ -0.49
SYNPO-205ENST00000522122 RNF151Q2KHN1 245 aa11.97□□□□□ -0.49
SYNPO-205ENST00000522122 SSMEM1Q8WWF3 244 aa11.97□□□□□ -0.49
SYNPO-205ENST00000522122 VOPP1Q96AW1 172 aa11.97□□□□□ -0.49
SYNPO-205ENST00000522122 PACRGQ96M98 296 aaPredicted RBP11.97□□□□□ -0.49
SYNPO-205ENST00000522122 C1QL1O75973 258 aa11.97□□□□□ -0.49
SYNPO-205ENST00000522122 CELA2AP08217 269 aa11.97□□□□□ -0.49
SYNPO-205ENST00000522122 FGF12P61328 243 aa11.97□□□□□ -0.49
SYNPO-205ENST00000522122 UBE2L3P68036 154 aaKnown RBP11.97□□□□□ -0.49
SYNPO-205ENST00000522122 TRIP6Q15654 476 aaKnown RBP11.97□□□□□ -0.49
SYNPO-205ENST00000522122 RNASEKQ6P5S7 137 aaKnown RBP11.97□□□□□ -0.49
SYNPO-205ENST00000522122 OR1K1Q8NGR3 316 aa11.97□□□□□ -0.49
SYNPO-205ENST00000522122 ZNF488Q96MN9 340 aa11.97□□□□□ -0.49
SYNPO-205ENST00000522122 TIMP4Q99727 224 aa11.97□□□□□ -0.49
SYNPO-205ENST00000522122 LYRM2Q9NU23 88 aaPredicted RBP11.97□□□□□ -0.49
SYNPO-205ENST00000522122 UNC119Q13432 240 aa11.97□□□□□ -0.49
SYNPO-205ENST00000522122 CEACAM21Q3KPI0 293 aa11.97□□□□□ -0.49
SYNPO-205ENST00000522122 DPPA3Q6W0C5 159 aa11.97□□□□□ -0.49
SYNPO-205ENST00000522122 SLC25A45Q8N413 288 aa11.97□□□□□ -0.49
SYNPO-205ENST00000522122 DEFB124Q8NES8 71 aa11.97□□□□□ -0.49
SYNPO-205ENST00000522122 OR4F17Q8NGA8 305 aa11.97□□□□□ -0.49
SYNPO-205ENST00000522122 SEBOXQ9HB31 216 aaPredicted RBP11.97□□□□□ -0.49
SYNPO-205ENST00000522122 R4GN57 208 aa11.97□□□□□ -0.49
SYNPO-205ENST00000522122 CCKARP32238 428 aa11.96□□□□□ -0.49
SYNPO-205ENST00000522122 INO80CQ6PI98 192 aaPredicted RBP11.96□□□□□ -0.49
SYNPO-205ENST00000522122 TCTEX1D1Q8N7M0 179 aa11.96□□□□□ -0.49
SYNPO-205ENST00000522122 TMEM222Q9H0R3 208 aa11.96□□□□□ -0.49
SYNPO-205ENST00000522122 LOC101059948A0A1B0GTJ6 334 aa11.96□□□□□ -0.49
SYNPO-205ENST00000522122 IGKV3-11P04433 115 aa11.96□□□□□ -0.49
SYNPO-205ENST00000522122 UBE2V2Q15819 145 aa11.96□□□□□ -0.49
SYNPO-205ENST00000522122 WNT2BQ93097 391 aa11.96□□□□□ -0.49
SYNPO-205ENST00000522122 RNF2Q99496 336 aa11.96□□□□□ -0.49
SYNPO-205ENST00000522122 SDK2Q58EX2 2172 aa11.96□□□□□ -0.49
SYNPO-205ENST00000522122 ZNF735P0CB33 412 aa11.96□□□□□ -0.5
SYNPO-205ENST00000522122 MMP9P14780 707 aa11.96□□□□□ -0.5
SYNPO-205ENST00000522122 SPCS3P61009 180 aa11.96□□□□□ -0.5
SYNPO-205ENST00000522122 GNB2P62879 340 aa11.96□□□□□ -0.5
SYNPO-205ENST00000522122 SLC23A3Q6PIS1 610 aa11.96□□□□□ -0.5
SYNPO-205ENST00000522122 MDP1Q86V88 176 aa11.96□□□□□ -0.5
SYNPO-205ENST00000522122 OR4P4Q8NGL7 312 aa11.96□□□□□ -0.5
SYNPO-205ENST00000522122 BLNKQ8WV28 456 aa11.96□□□□□ -0.5
SYNPO-205ENST00000522122 OR2J1Q9GZK6 312 aa11.96□□□□□ -0.5
SYNPO-205ENST00000522122 A0A087X0M5 115 aa11.96□□□□□ -0.5
SYNPO-205ENST00000522122 A0A1B0GX30 115 aa11.96□□□□□ -0.5
SYNPO-205ENST00000522122 PTBP3O95758 552 aaKnown RBP11.96□□□□□ -0.5
SYNPO-205ENST00000522122 G0S2P27469 103 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms