RNA–Protein interactions for RNA: ENST00000520177.5

G3BP1-208, Transcript of G3BP stress granule assembly factor 1, humanhuman

TSL 1 (best)

Gene G3BP1, Length 2,700 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
G3BP1-208ENST00000520177 TMEM41BQ5BJD5 291 aa12.7□□□□□ -0.38
G3BP1-208ENST00000520177 COA6Q5JTJ3 125 aaKnown RBP12.7□□□□□ -0.38
G3BP1-208ENST00000520177 AAED1Q7RTV5 226 aa12.7□□□□□ -0.38
G3BP1-208ENST00000520177 OR56B2PQ8NGI1 322 aa12.7□□□□□ -0.38
G3BP1-208ENST00000520177 OR4C12Q96R67 309 aa12.7□□□□□ -0.38
G3BP1-208ENST00000520177 SLC39A9Q9NUM3 307 aa12.7□□□□□ -0.38
G3BP1-208ENST00000520177 CACNA1EQ15878 2313 aa12.7□□□□□ -0.38
G3BP1-208ENST00000520177 FRYQ5TBA9 3013 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 FREM2Q5SZK8 3169 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 GCGP01275 180 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 IGKV1-39P01597 117 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 IGKV1D-39P04432 117 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 NUBP1P53384 320 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 FGF12P61328 243 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 NUTF2P61970 127 aaKnown RBP12.69□□□□□ -0.38
G3BP1-208ENST00000520177 SERF2P84101 59 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 MEF2BQ02080 365 aaPredicted RBP12.69□□□□□ -0.38
G3BP1-208ENST00000520177 PMS2P11Q13670 270 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 TESK1Q15569 626 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 Q8NFD4 153 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 OR5B12Q96R08 314 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 MRPL37Q9BZE1 423 aaKnown RBP12.69□□□□□ -0.38
G3BP1-208ENST00000520177 MTCH1Q9NZJ7 389 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 FUT9Q9Y231 359 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 PI4KAP42356 2102 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 FAM90A10PA6NDY2 464 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 FAM90A18PA6NE21 464 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 FAM90A16PA6NEW6 464 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 FAM90A20PA6NIJ5 464 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 FAM90A8PA6NJQ4 464 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 FAM90A7PA6NKC0 464 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 CD300LBA8K4G0 201 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 FAM90A22PA8MWA6 464 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 FAM90A12PA8MX19 464 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 FAM90A5PA8MXJ8 464 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 FAM90A23PA8MXZ1 464 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 IGKV1D-33P01593 117 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 IGKV1-33P01594 117 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 OR4A8P0C604 315 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 FAM90A15PP0C7V4 464 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 FAM90A13PP0C7W8 464 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 FAM90A14PP0C7W9 464 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 FAM90A24PP0C7X0 464 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 CCNOP22674 350 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 S100GP29377 79 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 CASP6P55212 293 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 PCOLCEQ15113 449 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 SRSF7Q16629 238 aaKnown RBP eCLIP12.69□□□□□ -0.38
G3BP1-208ENST00000520177 SPANXN5Q5MJ07 72 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 YRDCQ86U90 279 aaKnown RBP12.69□□□□□ -0.38
G3BP1-208ENST00000520177 MYPOPQ86VE0 399 aaPredicted RBP12.69□□□□□ -0.38
G3BP1-208ENST00000520177 RPP25LQ8N5L8 163 aaKnown RBP12.69□□□□□ -0.38
G3BP1-208ENST00000520177 BEND2Q8NDZ0 799 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 CPEB3Q8NE35 698 aaKnown RBP12.69□□□□□ -0.38
G3BP1-208ENST00000520177 TECTBQ96PL2 329 aa12.69□□□□□ -0.38
G3BP1-208ENST00000520177 UBE2L5PA0A1B0GUS4 154 aa12.68□□□□□ -0.38
G3BP1-208ENST00000520177 IFNL4K9M1U5 179 aa12.68□□□□□ -0.38
G3BP1-208ENST00000520177 GDF9O60383 454 aa12.68□□□□□ -0.38
G3BP1-208ENST00000520177 KBTBD11O94819 623 aa12.68□□□□□ -0.38
G3BP1-208ENST00000520177 IGHV3-9P01782 118 aa12.68□□□□□ -0.38
G3BP1-208ENST00000520177 MMP7P09237 267 aaPredicted RBP12.68□□□□□ -0.38
G3BP1-208ENST00000520177 CTXN2P0C2S0 81 aa12.68□□□□□ -0.38
G3BP1-208ENST00000520177 PRDX4Q13162 271 aa12.68□□□□□ -0.38
G3BP1-208ENST00000520177 SLC23A3Q6PIS1 610 aa12.68□□□□□ -0.38
G3BP1-208ENST00000520177 IL1F10Q8WWZ1 152 aa12.68□□□□□ -0.38
G3BP1-208ENST00000520177 ZNF845Q96IR2 970 aaPredicted RBP12.68□□□□□ -0.38
G3BP1-208ENST00000520177 WFIKKN1Q96NZ8 548 aa12.68□□□□□ -0.38
G3BP1-208ENST00000520177 IER2Q9BTL4 223 aa12.68□□□□□ -0.38
G3BP1-208ENST00000520177 WDR61Q9GZS3 305 aaKnown RBP12.68□□□□□ -0.38
G3BP1-208ENST00000520177 OR2W1Q9Y3N9 320 aa12.68□□□□□ -0.38
G3BP1-208ENST00000520177 FAM186AA6NE01 2351 aa12.68□□□□□ -0.38
G3BP1-208ENST00000520177 USF3Q68DE3 2245 aa12.68□□□□□ -0.38
G3BP1-208ENST00000520177 HS3ST1O14792 307 aa12.68□□□□□ -0.38
G3BP1-208ENST00000520177 RAC3P60763 192 aa12.68□□□□□ -0.38
G3BP1-208ENST00000520177 HBG1P69891 147 aa12.68□□□□□ -0.38
G3BP1-208ENST00000520177 HBG2P69892 147 aa12.68□□□□□ -0.38
G3BP1-208ENST00000520177 ZNF324BQ6AW86 544 aaPredicted RBP12.68□□□□□ -0.38
G3BP1-208ENST00000520177 TGIF2LYQ8IUE0 185 aa12.68□□□□□ -0.38
G3BP1-208ENST00000520177 OR10J5Q8NHC4 309 aa12.68□□□□□ -0.38
G3BP1-208ENST00000520177 RDH5Q92781 318 aa12.68□□□□□ -0.38
G3BP1-208ENST00000520177 ADGRG7Q96K78 797 aa12.68□□□□□ -0.38
G3BP1-208ENST00000520177 AGMATQ9BSE5 352 aa12.68□□□□□ -0.38
G3BP1-208ENST00000520177 SF3B5Q9BWJ5 86 aaKnown RBP12.68□□□□□ -0.38
G3BP1-208ENST00000520177 SLC25A6P12236 298 aa12.68□□□□□ -0.38
G3BP1-208ENST00000520177 CCL2P13500 99 aa12.68□□□□□ -0.38
G3BP1-208ENST00000520177 ZNF16P17020 682 aaPredicted RBP12.68□□□□□ -0.38
G3BP1-208ENST00000520177 CARD18P57730 90 aa12.68□□□□□ -0.38
G3BP1-208ENST00000520177 GNB2P62879 340 aa12.68□□□□□ -0.38
G3BP1-208ENST00000520177 MRPL41Q8IXM3 137 aaKnown RBP12.68□□□□□ -0.38
G3BP1-208ENST00000520177 SMRP1Q8NCR6 262 aa12.68□□□□□ -0.38
G3BP1-208ENST00000520177 CADM4Q8NFZ8 388 aa12.68□□□□□ -0.38
G3BP1-208ENST00000520177 MRPL30Q8TCC3 161 aaKnown RBP12.68□□□□□ -0.38
G3BP1-208ENST00000520177 GATAD1Q8WUU5 269 aa12.68□□□□□ -0.38
G3BP1-208ENST00000520177 TMEM170AQ8WVE7 144 aa12.68□□□□□ -0.38
G3BP1-208ENST00000520177 CLDN23Q96B33 292 aa12.68□□□□□ -0.38
G3BP1-208ENST00000520177 A0A1W2PR80 420 aa12.67□□□□□ -0.38
G3BP1-208ENST00000520177 ZNF716A6NP11 495 aa12.67□□□□□ -0.38
G3BP1-208ENST00000520177 CXCL13O43927 109 aa12.67□□□□□ -0.38
G3BP1-208ENST00000520177 IGKV1-5P01602 117 aa12.67□□□□□ -0.38
G3BP1-208ENST00000520177 OR8G2PQ6IF36 304 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms