RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 HCP5Q6MZN7 132 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 LYPD4Q6UWN0 246 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 AHSA2Q719I0 299 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 ZNF771Q7L3S4 317 aaPredicted RBP2.3□□□□□ -2.04
MCF2-208ENST00000519895 FAM185AQ8N0U4 392 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 BCL6BQ8N143 479 aaPredicted RBP2.3□□□□□ -2.04
MCF2-208ENST00000519895 OR51L1Q8NGJ5 315 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 OR4A5Q8NH83 315 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 OR9G1Q8NH87 305 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 OR2AE1Q8NHA4 323 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 SSMEM1Q8WWF3 244 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 EMG1Q92979 244 aaKnown RBP2.3□□□□□ -2.04
MCF2-208ENST00000519895 FAM46BQ96A09 425 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 SLC25A46Q96AG3 418 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 ZNF486Q96H40 463 aaPredicted RBP2.3□□□□□ -2.04
MCF2-208ENST00000519895 AKR1E2Q96JD6 320 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 ZNF714Q96N38 554 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 B9D2Q9BPU9 175 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 C1QTNF6Q9BXI9 259 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 SLC25A32Q9H2D1 315 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 MSL2Q9HCI7 577 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 GPR173Q9NS66 373 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 NECAP2Q9NVZ3 263 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 ZNRD1Q9P1U0 126 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 ST3GAL6Q9Y274 331 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 MRPS28Q9Y2Q9 187 aaKnown RBP2.3□□□□□ -2.04
MCF2-208ENST00000519895 MAB21L2Q9Y586 359 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 SIRT4Q9Y6E7 314 aaPredicted RBP2.3□□□□□ -2.04
MCF2-208ENST00000519895 LOC102723971A0A1B0GUV8 181 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 ODAMA1E959 279 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 M0QYG6 137 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 MFNGO00587 321 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 CDIPTO14735 213 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 OR2H2O95918 312 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 APOA1P02647 267 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 MT-ND4P03905 459 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 RBMY1CP0DJD4 496 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 SMIM18P0DKX4 95 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 CCL2P13500 99 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 ZNF182P17025 639 aaPredicted RBP2.3□□□□□ -2.04
MCF2-208ENST00000519895 RAB3BP20337 219 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 GADD45AP24522 165 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 CD80P33681 288 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 MAS1LP35410 378 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 RND3P61587 244 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 CCL8P80075 99 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 RSU1Q15404 277 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 SURF2Q15527 256 aaPredicted RBP2.3□□□□□ -2.04
MCF2-208ENST00000519895 POU2AF1Q16633 256 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 LRRC36Q1X8D7 754 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 UBE2NLQ5JXB2 153 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 GPR107Q5VW38 600 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 SLC25A48Q6ZT89 311 aaKnown RBP2.3□□□□□ -2.04
MCF2-208ENST00000519895 KCTD9Q7L273 389 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 Q8N6K4 173 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 Q8N7P7 452 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 NPBQ8NG41 125 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 OR5AN1Q8NGI8 311 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 EDARADDQ8WWZ3 215 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 SLC7A6Q92536 515 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 S100A13Q99584 98 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 SOSTQ9BQB4 213 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 C7orf50Q9BRJ6 194 aaKnown RBP2.3□□□□□ -2.04
MCF2-208ENST00000519895 DPCDQ9BVM2 203 aaPredicted RBP2.3□□□□□ -2.04
MCF2-208ENST00000519895 GPR61Q9BZJ8 451 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 TMEM133Q9H2Q1 129 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 BATF3Q9NR55 127 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 TXNL4BQ9NX01 149 aaKnown RBP2.3□□□□□ -2.04
MCF2-208ENST00000519895 TAS2R4Q9NYW5 299 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 DNAJB11Q9UBS4 358 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 RSL24D1Q9UHA3 163 aaKnown RBP2.3□□□□□ -2.04
MCF2-208ENST00000519895 CLEC2DQ9UHP7 191 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 HEATR1Q9H583 2144 aaKnown RBP2.3□□□□□ -2.04
MCF2-208ENST00000519895 DNAH7Q8WXX0 4024 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 TRAV24A0A0B4J272 114 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 C5orf63A6NC05 138 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 A6NDX4 124 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 SH2D7A6NKC9 451 aaPredicted RBP2.3□□□□□ -2.04
MCF2-208ENST00000519895 ZNF785A8K8V0 405 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 LEUTXA8MZ59 168 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 TEX22C9J3V5 150 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 MCRIP1C9JLW8 97 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 PSMD9O00233 223 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 RHBDL1O75783 438 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 HCKP08631 526 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 FBP1P09467 338 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 BCL3P20749 454 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 ZFP36P26651 326 aaKnown RBP2.3□□□□□ -2.04
MCF2-208ENST00000519895 ATP5IP56385 69 aaPredicted RBP2.3□□□□□ -2.04
MCF2-208ENST00000519895 GRK1Q15835 563 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 C17orf58Q2M2W7 97 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 PRAMEF6Q5VXH4 476 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 TMEM200BQ69YZ2 307 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 CNIH2Q6PI25 160 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 ZNF833PQ6ZTB9 187 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 BCDIN3DQ7Z5W3 292 aaKnown RBP2.3□□□□□ -2.04
MCF2-208ENST00000519895 CEACAM19Q7Z692 300 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 ZNF565Q8N9K5 539 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 TNFAIP8L1Q8WVP5 186 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 CCL17Q92583 94 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms