RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 HLA-DRB5Q30154 266 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 SLC22A6Q4U2R8 563 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 ACSM3Q53FZ2 586 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 FBLN7Q53RD9 439 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 OR4C13Q8NGP0 309 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 OR2T6Q8NHC8 308 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 ZNF596Q8TC21 504 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 MRGPRDQ8TDS7 321 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 KIRREL1Q96J84 757 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 DERL3Q96Q80 235 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 OR5M11Q96RB7 305 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 NEU1Q99519 415 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 OCSTAMPQ9BR26 566 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 SEC22CQ9BRL7 303 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 DPCDQ9BVM2 203 aaPredicted RBP7.49□□□□□ -1.21
HDAC3-215ENST00000519474 NPFFR1Q9GZQ6 430 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 PCDHB16Q9NRJ7 776 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 PAK1IP1Q9NWT1 392 aaPredicted RBP7.49□□□□□ -1.21
HDAC3-215ENST00000519474 CALYQ9NYX4 217 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 IDI2-AS1Q9NZ38 188 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 PITPNC1Q9UKF7 332 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 PSG11Q9UQ72 335 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 FAM90A18PA6NE21 464 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 FAM90A16PA6NEW6 464 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 FAM90A20PA6NIJ5 464 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 FAM90A9PA6NNJ1 464 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 FAM90A12PA8MX19 464 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 FAM90A5PA8MXJ8 464 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 C15orf65H3BRN8 121 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 J3QR06 171 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 CCRL2O00421 344 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 ZNF780AO75290 641 aaPredicted RBP7.48□□□□□ -1.21
HDAC3-215ENST00000519474 NDUFS6O75380 124 aaKnown RBP7.48□□□□□ -1.21
HDAC3-215ENST00000519474 OR7C1O76099 320 aaPredicted RBP7.48□□□□□ -1.21
HDAC3-215ENST00000519474 IGHV3-7P01780 117 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 FAM90A15PP0C7V4 464 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 FAM90A13PP0C7W8 464 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 FAM90A14PP0C7W9 464 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 FAM90A24PP0C7X0 464 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 VSIG10L2P0DP72 767 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 PF4V1P10720 104 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 GTF2F2P13984 249 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 SERPINA2P20848 420 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 NFYBP25208 207 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 OR3A3P47888 321 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 AQP4P55087 323 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 GPR176Q14439 515 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 IRF3Q14653 427 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 SPHARQ15513 63 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 KCTD21Q4G0X4 260 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 TPTE2P1Q5T6R2 138 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 GLIPR1L1Q6UWM5 242 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 SLC16A12Q6ZSM3 486 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 KLHDC1Q8N7A1 406 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 C11orf44Q8N8P7 122 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 OR10A7Q8NGE5 316 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 OR9G1Q8NH87 305 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 WIPF2Q8TF74 440 aaPredicted RBP7.48□□□□□ -1.21
HDAC3-215ENST00000519474 LEAP2Q969E1 77 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 MUL1Q969V5 352 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 CYYR1Q96J86 154 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 S100A13Q99584 98 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 C12orf57Q99622 126 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 PRSS22Q9GZN4 317 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 WNT10AQ9GZT5 417 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 DUSP21Q9H596 190 aa7.48□□□□□ -1.21
HDAC3-215ENST00000519474 MRPS28Q9Y2Q9 187 aaKnown RBP7.48□□□□□ -1.21
HDAC3-215ENST00000519474 LSM2Q9Y333 95 aaKnown RBP7.48□□□□□ -1.21
HDAC3-215ENST00000519474 C5orf51A6NDU8 294 aa7.47□□□□□ -1.21
HDAC3-215ENST00000519474 MYL12BO14950 172 aa7.47□□□□□ -1.21
HDAC3-215ENST00000519474 TSPAN15O95858 294 aa7.47□□□□□ -1.21
HDAC3-215ENST00000519474 IL1AP01583 271 aa7.47□□□□□ -1.21
HDAC3-215ENST00000519474 AMY1AP04745 511 aa7.47□□□□□ -1.21
HDAC3-215ENST00000519474 AMY2AP04746 511 aa7.47□□□□□ -1.21
HDAC3-215ENST00000519474 BRS3P32247 399 aa7.47□□□□□ -1.21
HDAC3-215ENST00000519474 TAS2R60P59551 318 aa7.47□□□□□ -1.21
HDAC3-215ENST00000519474 VAMP2P63027 116 aa7.47□□□□□ -1.21
HDAC3-215ENST00000519474 SLC35A2P78381 396 aa7.47□□□□□ -1.21
HDAC3-215ENST00000519474 DEFA6Q01524 100 aa7.47□□□□□ -1.21
HDAC3-215ENST00000519474 GPR50Q13585 617 aa7.47□□□□□ -1.21
HDAC3-215ENST00000519474 DIAPH2-AS1Q14236 149 aa7.47□□□□□ -1.21
HDAC3-215ENST00000519474 LTC4SQ16873 150 aa7.47□□□□□ -1.21
HDAC3-215ENST00000519474 MPV17LQ2QL34 196 aa7.47□□□□□ -1.21
HDAC3-215ENST00000519474 ATAD3CQ5T2N8 411 aa7.47□□□□□ -1.21
HDAC3-215ENST00000519474 FAM27D1Q5T7N8 215 aa7.47□□□□□ -1.21
HDAC3-215ENST00000519474 STEAP3Q658P3 488 aa7.47□□□□□ -1.21
HDAC3-215ENST00000519474 FAM53AQ6NSI3 398 aaPredicted RBP7.47□□□□□ -1.21
HDAC3-215ENST00000519474 Q6ZTK2 550 aa7.47□□□□□ -1.21
HDAC3-215ENST00000519474 LINC00596Q86U02 117 aa7.47□□□□□ -1.21
HDAC3-215ENST00000519474 LRRTM1Q86UE6 522 aa7.47□□□□□ -1.21
HDAC3-215ENST00000519474 JAGN1Q8N5M9 183 aa7.47□□□□□ -1.21
HDAC3-215ENST00000519474 MS4A15Q8N5U1 240 aa7.47□□□□□ -1.21
HDAC3-215ENST00000519474 TMEM104Q8NE00 496 aa7.47□□□□□ -1.21
HDAC3-215ENST00000519474 FAM110DQ8TAY7 271 aaPredicted RBP7.47□□□□□ -1.21
HDAC3-215ENST00000519474 CCDC107Q8WV48 283 aa7.47□□□□□ -1.21
HDAC3-215ENST00000519474 CREB3L1Q96BA8 519 aa7.47□□□□□ -1.21
HDAC3-215ENST00000519474 MRPS24Q96EL2 167 aaKnown RBP7.47□□□□□ -1.21
HDAC3-215ENST00000519474 MMP28Q9H239 520 aa7.47□□□□□ -1.21
HDAC3-215ENST00000519474 MMP27Q9H306 513 aa7.47□□□□□ -1.21
HDAC3-215ENST00000519474 BANF2Q9H503 90 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms