RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 OR52E6Q96RD3 313 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 KLF6Q99612 283 aaPredicted RBP2.34□□□□□ -2.03
VPS13B-207ENST00000518569 PITX2Q99697 317 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 GABRG3Q99928 467 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 CWH43Q9H720 699 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 DUX4Q9UBX2 424 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 NUFIP1Q9UHK0 495 aaKnown RBP2.34□□□□□ -2.03
VPS13B-207ENST00000518569 VPREB3Q9UKI3 123 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 PYCARDQ9ULZ3 195 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 SLC35A3Q9Y2D2 325 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 SIGLEC9Q9Y336 463 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 SBF1O95248 1867 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 CACNA1SQ13698 1873 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 AK9Q5TCS8 1911 aa2.34□□□□□ -2.04
VPS13B-207ENST00000518569 ALS2Q96Q42 1657 aa2.34□□□□□ -2.04
VPS13B-207ENST00000518569 A0A1W2PP64 1363 aa2.34□□□□□ -2.04
VPS13B-207ENST00000518569 CNTNAP1P78357 1384 aa2.34□□□□□ -2.04
VPS13B-207ENST00000518569 KIF15Q9NS87 1388 aa2.34□□□□□ -2.04
VPS13B-207ENST00000518569 ARHGAP31Q2M1Z3 1444 aa2.34□□□□□ -2.04
VPS13B-207ENST00000518569 VIRMAQ69YN4 1812 aaKnown RBP2.33□□□□□ -2.04
VPS13B-207ENST00000518569 TRBV6-6A0A0A6YYG2 114 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 BORCS7-ASMTA0A0B4J1R7 106 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 IGHV2OR16-5A0A0B4J2B6 119 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 FAM240AA0A1B0GVK7 77 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 IGSF23A1L1A6 192 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 SMKR1H3BMG3 65 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 K7ERU9 68 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 M0R1B8 84 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 NME4O00746 187 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 CCDC22O60826 627 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 FOXH1O75593 365 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 OR2J2O76002 312 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 TDGF1P13385 188 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 TAC1P20366 129 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 MYL9P24844 172 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 CXCR1P25024 350 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 GRPRP30550 384 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 AKR1C3P42330 323 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 RPS10P46783 165 aaKnown RBP2.33□□□□□ -2.04
VPS13B-207ENST00000518569 PSMD8P48556 350 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 TDGF1P3P51864 188 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 SUB1P53999 127 aaKnown RBP eCLIP2.33□□□□□ -2.04
VPS13B-207ENST00000518569 PIGPP57054 158 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 ZNF121P58317 390 aaPredicted RBP2.33□□□□□ -2.04
VPS13B-207ENST00000518569 RAB5BP61020 215 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 NUTF2P61970 127 aaKnown RBP2.33□□□□□ -2.04
VPS13B-207ENST00000518569 PPP1CBP62140 327 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 PPP1R1AQ13522 171 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 GGTLC2Q14390 218 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 CDK10Q15131 360 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 IRF4Q15306 451 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 RSU1Q15404 277 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 LRRC75BQ2VPJ9 315 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 TRMT12Q53H54 448 aaKnown RBP2.33□□□□□ -2.04
VPS13B-207ENST00000518569 TMEM128Q5BJH2 165 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 CARD16Q5EG05 197 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 RNASE10Q5GAN6 216 aaKnown RBP2.33□□□□□ -2.04
VPS13B-207ENST00000518569 C9orf64Q5T6V5 341 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 TEX36Q5VZQ5 186 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 TBPL2Q6SJ96 375 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 UGT2A3Q6UWM9 527 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 CASP12Q6UXS9 341 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 ACP7Q6ZNF0 438 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 ZNF571Q7Z3V5 609 aaPredicted RBP2.33□□□□□ -2.04
VPS13B-207ENST00000518569 FAM19A1Q7Z5A9 133 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 ZADH2Q8N4Q0 377 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 OR8J3Q8NGG0 315 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 OR9Q1Q8NGQ5 310 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 OR2A1Q8NGT9 310 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 OR1P1Q8NH06 330 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 ASB13Q8WXK3 278 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 FGF11Q92914 225 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 PYURFQ96I23 114 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 PPP3R2Q96LZ3 170 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 ZNF488Q96MN9 340 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 OXGR1Q96P68 337 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 OR2M4Q96R27 311 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 GINS3Q9BRX5 216 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 PDCD10Q9BUL8 212 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 CCDC32Q9BV29 185 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 CHRNA10Q9GZZ6 450 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 DCSTAMPQ9H295 470 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 NEUROG2Q9H2A3 272 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 MS4A6AQ9H2W1 248 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 VCXQ9H320 206 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 RASL12Q9NYN1 266 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 KCNIP1Q9NZI2 227 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 GNPTGQ9UJJ9 305 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 POLR1DQ9Y2S0 133 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 KNDC1Q76NI1 1749 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 TIAM2Q8IVF5 1701 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 TONSLQ96HA7 1378 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 TECPR2O15040 1411 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 ABCC5O15440 1437 aa2.33□□□□□ -2.04
VPS13B-207ENST00000518569 BRCA1P38398 1863 aaKnown RBP2.33□□□□□ -2.04
VPS13B-207ENST00000518569 TULP4Q9NRJ4 1543 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 CLTCL1P53675 1640 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 PAPPAQ13219 1627 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 NHSQ6T4R5 1651 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 A0A0G2JN53 185 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms