RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 TMEM80Q96HE8 168 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 CNBD2Q96M20 576 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 C8orf49Q96NF6 230 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 SLC30A2Q9BRI3 323 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 ADAT1Q9BUB4 502 aaKnown RBP2.29□□□□□ -2.04
SKP1-204ENST00000517691 PAPOLGQ9BWT3 736 aaKnown RBP2.29□□□□□ -2.04
SKP1-204ENST00000517691 REG4Q9BYZ8 158 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 SRRQ9GZT4 340 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 NAA50Q9GZZ1 169 aaKnown RBP2.29□□□□□ -2.04
SKP1-204ENST00000517691 SLC22A4Q9H015 551 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 ISG20L2Q9H9L3 353 aaKnown RBP2.29□□□□□ -2.04
SKP1-204ENST00000517691 BEX1Q9HBH7 125 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 GPR84Q9NQS5 396 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 FAM206AQ9NX38 181 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 SCN3BQ9NY72 215 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 ZNF319Q9P2F9 582 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 PPP1R3CQ9UQK1 317 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 SLC22A13Q9Y226 551 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 MMP24Q9Y5R2 645 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 CACNG2Q9Y698 323 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 R4GMQ9 66 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 ABCA4P78363 2273 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 MYO9AB2RTY4 2548 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 ROS1P08922 2347 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 CACNA1DQ01668 2161 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 CREBBPQ92793 2442 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 A0A0G2JK05 382 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 KBTBD11-OT1A0A1B0GTJ5 212 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 hCG_38984A0A1B0GV85 526 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 A0A1B0GVI7 797 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 A6NIN4 97 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 CLDN25C9JDP6 229 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 RNASEK-C17orf49H0YIS7 233 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 H3BTX0 84 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 J3QRE1 110 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 XPNPEP2O43895 674 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 CSF3P09919 207 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 NPSP0C0P6 89 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 CTXN2P0C2S0 81 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 OCM2P0CE71 109 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 OCMP0CE72 109 aaPredicted RBP2.28□□□□□ -2.04
SKP1-204ENST00000517691 ANXA3P12429 323 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 NDUFB7P17568 137 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 USF1P22415 310 aaPredicted RBP2.28□□□□□ -2.04
SKP1-204ENST00000517691 RBMXP38159 391 aaKnown RBP2.28□□□□□ -2.04
SKP1-204ENST00000517691 DDOSTP39656 456 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 NR4A2P43354 598 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 GPR6P46095 362 aaPredicted RBP2.28□□□□□ -2.04
SKP1-204ENST00000517691 EFNB2P52799 333 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 TMEM33P57088 247 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 UBE2KP61086 200 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 RIPPLY1Q0D2K3 151 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 ST3GAL4Q11206 333 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 FOXI1Q12951 378 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 PRDX4Q13162 271 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 SPRNQ5BIV9 151 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 DMRTC1Q5HYR2 192 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 PAPPA-AS1Q5QFB9 102 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 AVPI1Q5T686 147 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 ASPHD1Q5U4P2 390 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 DMKNQ6E0U4 476 aaPredicted RBP2.28□□□□□ -2.04
SKP1-204ENST00000517691 OR4A47Q6IF82 309 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 ZNF562Q6V9R5 426 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 AHSA2Q719I0 299 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 Q71RC1 249 aaPredicted RBP2.28□□□□□ -2.04
SKP1-204ENST00000517691 Q75L30 129 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 CIARTQ8N365 385 aaPredicted RBP2.28□□□□□ -2.04
SKP1-204ENST00000517691 ZNF676Q8N7Q3 588 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 OR5D18Q8NGL1 313 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 OR4A4PQ8NGN8 299 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 OR1B1Q8NGR6 318 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 OR11L1Q8NGX0 322 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 ZNF420Q8TAQ5 688 aaPredicted RBP2.28□□□□□ -2.04
SKP1-204ENST00000517691 C10orf105Q8TEF2 133 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 RORBQ92753 470 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 MYDGFQ969H8 173 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 YIPF5Q969M3 257 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 UPRTQ96BW1 309 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 RNF170Q96K19 258 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 C18orf12Q96KH6 178 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 LYZL4Q96KX0 146 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 OR2V2Q96R30 315 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 SMR3AQ99954 134 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 MICU1Q9BPX6 476 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 BPESC1Q9GZL8 116 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 CCDC90BQ9GZT6 254 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 Q9H521 79 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 AAMDCQ9H7C9 122 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 MOB1AQ9H8S9 216 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 PLEKHA1Q9HB21 404 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 MYOZ1Q9NP98 299 aaPredicted RBP2.28□□□□□ -2.04
SKP1-204ENST00000517691 TMEM106BQ9NUM4 274 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 NECAP2Q9NVZ3 263 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 BABAM2Q9NXR7 383 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 SIGLEC8Q9NYZ4 499 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 CLN8Q9UBY8 286 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 NUFIP1Q9UHK0 495 aaKnown RBP2.28□□□□□ -2.04
SKP1-204ENST00000517691 ZNF391Q9UJN7 358 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 EXOSC1Q9Y3B2 195 aaKnown RBP2.28□□□□□ -2.04
SKP1-204ENST00000517691 NOP16Q9Y3C1 178 aaKnown RBP2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms