RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 TPRKBQ9Y3C4 175 aa10.82□□□□□ -0.68
TCOF1-215ENST00000515516 LRRC42Q9Y546 428 aa10.82□□□□□ -0.68
TCOF1-215ENST00000515516 AP4M1O00189 453 aa10.81□□□□□ -0.68
TCOF1-215ENST00000515516 SLC31A2O15432 143 aa10.81□□□□□ -0.68
TCOF1-215ENST00000515516 RGS11O94810 467 aa10.81□□□□□ -0.68
TCOF1-215ENST00000515516 RPL23AP62750 156 aaKnown RBP10.81□□□□□ -0.68
TCOF1-215ENST00000515516 CT45A1Q5HYN5 189 aa10.81□□□□□ -0.68
TCOF1-215ENST00000515516 FOXB2Q5VYV0 432 aa10.81□□□□□ -0.68
TCOF1-215ENST00000515516 FAM53AQ6NSI3 398 aaPredicted RBP10.81□□□□□ -0.68
TCOF1-215ENST00000515516 LYPD6Q86Y78 171 aa10.81□□□□□ -0.68
TCOF1-215ENST00000515516 STPG2Q8N412 459 aa10.81□□□□□ -0.68
TCOF1-215ENST00000515516 CT45A3Q8NHU0 189 aa10.81□□□□□ -0.68
TCOF1-215ENST00000515516 KCNG3Q8TAE7 436 aa10.81□□□□□ -0.68
TCOF1-215ENST00000515516 ST6GALNAC6Q969X2 333 aa10.81□□□□□ -0.68
TCOF1-215ENST00000515516 GPR61Q9BZJ8 451 aa10.81□□□□□ -0.68
TCOF1-215ENST00000515516 ABCG5Q9H222 651 aa10.81□□□□□ -0.68
TCOF1-215ENST00000515516 LIN7CQ9NUP9 197 aaKnown RBP10.81□□□□□ -0.68
TCOF1-215ENST00000515516 ABRACLQ9P1F3 81 aa10.81□□□□□ -0.68
TCOF1-215ENST00000515516 KIAA2026Q5HYC2 2103 aa10.81□□□□□ -0.68
TCOF1-215ENST00000515516 RRP9O43818 475 aaKnown RBP10.8□□□□□ -0.68
TCOF1-215ENST00000515516 HSMCR30P0CW71 290 aa10.8□□□□□ -0.68
TCOF1-215ENST00000515516 SRMP19623 302 aa10.8□□□□□ -0.68
TCOF1-215ENST00000515516 HTR2CP28335 458 aa10.8□□□□□ -0.68
TCOF1-215ENST00000515516 SLC6A1P30531 599 aa10.8□□□□□ -0.68
TCOF1-215ENST00000515516 GPR12P47775 334 aa10.8□□□□□ -0.68
TCOF1-215ENST00000515516 ZNF137PP52743 207 aa10.8□□□□□ -0.68
TCOF1-215ENST00000515516 INSL4Q14641 139 aa10.8□□□□□ -0.68
TCOF1-215ENST00000515516 MORN2Q502X0 79 aa10.8□□□□□ -0.68
TCOF1-215ENST00000515516 SIGIRRQ6IA17 410 aa10.8□□□□□ -0.68
TCOF1-215ENST00000515516 TEX38Q6PEX7 206 aa10.8□□□□□ -0.68
TCOF1-215ENST00000515516 Q6ZPA2 131 aa10.8□□□□□ -0.68
TCOF1-215ENST00000515516 LRRTM1Q86UE6 522 aa10.8□□□□□ -0.68
TCOF1-215ENST00000515516 Q8N6K4 173 aa10.8□□□□□ -0.68
TCOF1-215ENST00000515516 ZNF439Q8NDP4 499 aa10.8□□□□□ -0.68
TCOF1-215ENST00000515516 DPF1Q92782 380 aa10.8□□□□□ -0.68
TCOF1-215ENST00000515516 GALMQ96C23 342 aa10.8□□□□□ -0.68
TCOF1-215ENST00000515516 S1PR3Q99500 378 aa10.8□□□□□ -0.68
TCOF1-215ENST00000515516 ABHD14AQ9BUJ0 271 aa10.8□□□□□ -0.68
TCOF1-215ENST00000515516 TMEM59Q9BXS4 323 aa10.8□□□□□ -0.68
TCOF1-215ENST00000515516 CHMP1AQ9HD42 196 aaPredicted RBP10.8□□□□□ -0.68
TCOF1-215ENST00000515516 MBNL3Q9NUK0 354 aaKnown RBP10.8□□□□□ -0.68
TCOF1-215ENST00000515516 AURKAIP1Q9NWT8 199 aaPredicted RBP10.8□□□□□ -0.68
TCOF1-215ENST00000515516 JPT1Q9UK76 154 aa10.8□□□□□ -0.68
TCOF1-215ENST00000515516 LANCL1O43813 399 aa10.79□□□□□ -0.68
TCOF1-215ENST00000515516 RANBP1P43487 201 aa10.79□□□□□ -0.68
TCOF1-215ENST00000515516 ZNF134P52741 427 aa10.79□□□□□ -0.68
TCOF1-215ENST00000515516 HTD2P86397 168 aa10.79□□□□□ -0.68
TCOF1-215ENST00000515516 TRAM1Q15629 374 aa10.79□□□□□ -0.68
TCOF1-215ENST00000515516 PNLIPRP3Q17RR3 467 aa10.79□□□□□ -0.68
TCOF1-215ENST00000515516 C1orf100Q5SVJ3 147 aa10.79□□□□□ -0.68
TCOF1-215ENST00000515516 FAM27D1Q5T7N8 215 aa10.79□□□□□ -0.68
TCOF1-215ENST00000515516 LIPKQ5VXJ0 399 aa10.79□□□□□ -0.68
TCOF1-215ENST00000515516 OR10K2Q6IF99 312 aa10.79□□□□□ -0.68
TCOF1-215ENST00000515516 OR2W3Q7Z3T1 314 aa10.79□□□□□ -0.68
TCOF1-215ENST00000515516 Q8N9W7 124 aa10.79□□□□□ -0.68
TCOF1-215ENST00000515516 OR52L2PQ8NGH6 319 aa10.79□□□□□ -0.68
TCOF1-215ENST00000515516 MRPL30Q8TCC3 161 aaKnown RBP10.79□□□□□ -0.68
TCOF1-215ENST00000515516 FAAP24Q9BTP7 215 aa10.79□□□□□ -0.68
TCOF1-215ENST00000515516 MCRIP2Q9BUT9 160 aaKnown RBP10.79□□□□□ -0.68
TCOF1-215ENST00000515516 CCDC90BQ9GZT6 254 aa10.79□□□□□ -0.68
TCOF1-215ENST00000515516 VCX3BQ9H321 246 aa10.79□□□□□ -0.68
TCOF1-215ENST00000515516 NKX1-2Q9UD57 310 aaPredicted RBP10.79□□□□□ -0.68
TCOF1-215ENST00000515516 STEAP1Q9UHE8 339 aa10.79□□□□□ -0.68
TCOF1-215ENST00000515516 ZNF736B4DX44 427 aaPredicted RBP10.78□□□□□ -0.68
TCOF1-215ENST00000515516 RGS10O43665 173 aa10.78□□□□□ -0.68
TCOF1-215ENST00000515516 YPEL1O60688 119 aa10.78□□□□□ -0.68
TCOF1-215ENST00000515516 BPNT1O95861 308 aa10.78□□□□□ -0.68
TCOF1-215ENST00000515516 VSIG8P0DPA2 414 aa10.78□□□□□ -0.68
TCOF1-215ENST00000515516 VDAC1P21796 283 aa10.78□□□□□ -0.68
TCOF1-215ENST00000515516 CHATP28329 748 aa10.78□□□□□ -0.68
TCOF1-215ENST00000515516 SOX6P35712 828 aa10.78□□□□□ -0.68
TCOF1-215ENST00000515516 PPP1CCP36873 323 aaKnown RBP10.78□□□□□ -0.68
TCOF1-215ENST00000515516 MYCNOSP40205 109 aa10.78□□□□□ -0.68
TCOF1-215ENST00000515516 AQP4P55087 323 aa10.78□□□□□ -0.68
TCOF1-215ENST00000515516 GP2P55259 537 aaKnown RBP10.78□□□□□ -0.68
TCOF1-215ENST00000515516 RPS27AP62979 156 aaKnown RBP10.78□□□□□ -0.68
TCOF1-215ENST00000515516 CXorf66Q5JRM2 361 aaPredicted RBP10.78□□□□□ -0.68
TCOF1-215ENST00000515516 C6orf201Q7Z4U5 140 aa10.78□□□□□ -0.68
TCOF1-215ENST00000515516 KLHL30-AS1Q8NEE0 82 aa10.78□□□□□ -0.68
TCOF1-215ENST00000515516 OR2AK2Q8NG84 335 aa10.78□□□□□ -0.68
TCOF1-215ENST00000515516 OR6M1Q8NGM8 313 aa10.78□□□□□ -0.68
TCOF1-215ENST00000515516 SETD6Q8TBK2 473 aa10.78□□□□□ -0.68
TCOF1-215ENST00000515516 TMEM203Q969S6 136 aa10.78□□□□□ -0.68
TCOF1-215ENST00000515516 YPEL2Q96QA6 119 aa10.78□□□□□ -0.68
TCOF1-215ENST00000515516 SULT4A1Q9BR01 284 aa10.78□□□□□ -0.68
TCOF1-215ENST00000515516 URM1Q9BTM9 101 aaKnown RBP10.78□□□□□ -0.68
TCOF1-215ENST00000515516 PLGRKTQ9HBL7 147 aa10.78□□□□□ -0.68
TCOF1-215ENST00000515516 PLEKHJ1Q9NW61 149 aa10.78□□□□□ -0.68
TCOF1-215ENST00000515516 LSM2Q9Y333 95 aaKnown RBP10.78□□□□□ -0.68
TCOF1-215ENST00000515516 LINC01548A6NM66 108 aa10.77□□□□□ -0.69
TCOF1-215ENST00000515516 SLC22A1O15245 554 aa10.77□□□□□ -0.69
TCOF1-215ENST00000515516 ARL6IP5O75915 188 aa10.77□□□□□ -0.69
TCOF1-215ENST00000515516 UCHL1P09936 223 aa10.77□□□□□ -0.69
TCOF1-215ENST00000515516 ARSBP15848 533 aa10.77□□□□□ -0.69
TCOF1-215ENST00000515516 PSMA1P25786 263 aaKnown RBP10.77□□□□□ -0.69
TCOF1-215ENST00000515516 BLVRBP30043 206 aaPredicted RBP10.77□□□□□ -0.69
TCOF1-215ENST00000515516 THBS3P49746 956 aa10.77□□□□□ -0.69
TCOF1-215ENST00000515516 GNMTQ14749 295 aa10.77□□□□□ -0.69
TCOF1-215ENST00000515516 C8orf86Q6ZUL3 223 aa10.77□□□□□ -0.69
TCOF1-215ENST00000515516 ZNF695Q8IW36 515 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms