RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 RAB33BQ9H082 229 aa12.47□□□□□ -0.41
TRIO-222ENST00000515144 SYNGR1O43759 233 aa12.47□□□□□ -0.41
TRIO-222ENST00000515144 PTBP1P26599 531 aaKnown RBP eCLIP12.47□□□□□ -0.413e-8■■■■□ 26.1
TRIO-222ENST00000515144 CAMPP49913 170 aa12.47□□□□□ -0.41
TRIO-222ENST00000515144 NUBP1P53384 320 aa12.47□□□□□ -0.41
TRIO-222ENST00000515144 TEX30Q5JUR7 227 aa12.47□□□□□ -0.41
TRIO-222ENST00000515144 GPR137Q96N19 417 aa12.47□□□□□ -0.41
TRIO-222ENST00000515144 RNF2Q99496 336 aa12.47□□□□□ -0.41
TRIO-222ENST00000515144 WDR61Q9GZS3 305 aaKnown RBP12.47□□□□□ -0.41
TRIO-222ENST00000515144 USF3Q68DE3 2245 aa12.47□□□□□ -0.41
TRIO-222ENST00000515144 FAM181BA6NEQ2 426 aa12.47□□□□□ -0.41
TRIO-222ENST00000515144 GON7Q9BXV9 100 aa12.47□□□□□ -0.41
TRIO-222ENST00000515144 CHST1O43916 411 aa12.47□□□□□ -0.41
TRIO-222ENST00000515144 C11orf87Q6NUJ2 197 aa12.47□□□□□ -0.41
TRIO-222ENST00000515144 ZNF737O75373 536 aa12.47□□□□□ -0.41
TRIO-222ENST00000515144 ADAP1O75689 374 aa12.47□□□□□ -0.41
TRIO-222ENST00000515144 CADM3Q8N126 398 aa12.47□□□□□ -0.41
TRIO-222ENST00000515144 ARRDC1Q8N5I2 433 aa12.47□□□□□ -0.41
TRIO-222ENST00000515144 SFXN3Q9BWM7 321 aa12.47□□□□□ -0.41
TRIO-222ENST00000515144 J3QT63 122 aa12.46□□□□□ -0.41
TRIO-222ENST00000515144 NEURL1O76050 574 aa12.46□□□□□ -0.41
TRIO-222ENST00000515144 HBZP02008 142 aa12.46□□□□□ -0.41
TRIO-222ENST00000515144 VSIG10L2P0DP72 767 aa12.46□□□□□ -0.41
TRIO-222ENST00000515144 VKORC1L1Q8N0U8 176 aa12.46□□□□□ -0.41
TRIO-222ENST00000515144 VSTM2AQ8TAG5 236 aa12.46□□□□□ -0.41
TRIO-222ENST00000515144 J3QR06 171 aa12.46□□□□□ -0.41
TRIO-222ENST00000515144 GSTZ1O43708 216 aaPredicted RBP12.46□□□□□ -0.41
TRIO-222ENST00000515144 G0S2P27469 103 aa12.46□□□□□ -0.41
TRIO-222ENST00000515144 ERVS71-1P61550 626 aa12.46□□□□□ -0.41
TRIO-222ENST00000515144 OR4P4Q8NGL7 312 aa12.46□□□□□ -0.41
TRIO-222ENST00000515144 ZNF154Q13106 437 aa12.46□□□□□ -0.41
TRIO-222ENST00000515144 LIAT1Q6ZQX7 453 aa12.46□□□□□ -0.41
TRIO-222ENST00000515144 DOLPP1Q86YN1 238 aa12.46□□□□□ -0.41
TRIO-222ENST00000515144 DGAT2L7PQ6IED9 249 aa12.46□□□□□ -0.42
TRIO-222ENST00000515144 PRNTQ86SH4 94 aa12.46□□□□□ -0.42
TRIO-222ENST00000515144 HLA-GP17693 338 aa12.46□□□□□ -0.42
TRIO-222ENST00000515144 UBE2L3P68036 154 aaKnown RBP12.46□□□□□ -0.42
TRIO-222ENST00000515144 TM4SF20Q53R12 229 aa12.46□□□□□ -0.42
TRIO-222ENST00000515144 GPA33Q99795 319 aa12.46□□□□□ -0.42
TRIO-222ENST00000515144 ANXA10Q9UJ72 324 aa12.46□□□□□ -0.42
TRIO-222ENST00000515144 SCO1O75880 301 aa12.45□□□□□ -0.42
TRIO-222ENST00000515144 PSG5Q15238 335 aa12.45□□□□□ -0.42
TRIO-222ENST00000515144 IGSF11Q5DX21 431 aa12.45□□□□□ -0.42
TRIO-222ENST00000515144 ADTRPQ96IZ2 230 aa12.45□□□□□ -0.42
TRIO-222ENST00000515144 WASHC3Q9Y3C0 194 aa12.45□□□□□ -0.42
TRIO-222ENST00000515144 TGFAP01135 160 aa12.45□□□□□ -0.42
TRIO-222ENST00000515144 PPYP01298 95 aa12.45□□□□□ -0.42
TRIO-222ENST00000515144 Q1RN00 199 aa12.45□□□□□ -0.42
TRIO-222ENST00000515144 FAM78BQ5VT40 261 aa12.45□□□□□ -0.42
TRIO-222ENST00000515144 CCL27Q9Y4X3 112 aa12.45□□□□□ -0.42
TRIO-222ENST00000515144 IGHV3-66A0A0C4DH42 116 aa12.45□□□□□ -0.42
TRIO-222ENST00000515144 OR2H2O95918 312 aa12.45□□□□□ -0.42
TRIO-222ENST00000515144 PTTG1IPP53801 180 aa12.45□□□□□ -0.42
TRIO-222ENST00000515144 KRTDAPP60985 99 aa12.45□□□□□ -0.42
TRIO-222ENST00000515144 FAM201AQ5SY85 155 aa12.45□□□□□ -0.42
TRIO-222ENST00000515144 SRSF6Q13247 344 aaKnown RBP12.45□□□□□ -0.42
TRIO-222ENST00000515144 FA2HQ7L5A8 372 aa12.45□□□□□ -0.42
TRIO-222ENST00000515144 SPSB2Q99619 263 aa12.45□□□□□ -0.42
TRIO-222ENST00000515144 GHITMQ9H3K2 345 aa12.45□□□□□ -0.42
TRIO-222ENST00000515144 RPL30P62888 115 aaKnown RBP12.45□□□□□ -0.42
TRIO-222ENST00000515144 GAPDHP04406 335 aaKnown RBP12.45□□□□□ -0.42
TRIO-222ENST00000515144 NGFRP08138 427 aa12.45□□□□□ -0.42
TRIO-222ENST00000515144 CD37P11049 281 aa12.45□□□□□ -0.42
TRIO-222ENST00000515144 ROM1Q03395 351 aa12.45□□□□□ -0.42
TRIO-222ENST00000515144 OR10G4Q8NGN3 311 aa12.45□□□□□ -0.42
TRIO-222ENST00000515144 OR10G9Q8NGN4 311 aa12.45□□□□□ -0.42
TRIO-222ENST00000515144 OR10G7Q8NGN6 311 aa12.45□□□□□ -0.42
TRIO-222ENST00000515144 NQO2P16083 231 aa12.44□□□□□ -0.42
TRIO-222ENST00000515144 C5orf17Q8NAS9 161 aa12.44□□□□□ -0.42
TRIO-222ENST00000515144 S4R3C0 116 aa12.44□□□□□ -0.42
TRIO-222ENST00000515144 ZDHHC22Q8N966 263 aa12.44□□□□□ -0.42
TRIO-222ENST00000515144 OR4B1Q8NGF8 309 aa12.44□□□□□ -0.42
TRIO-222ENST00000515144 NKX6-2Q9C056 277 aaPredicted RBP12.44□□□□□ -0.42
TRIO-222ENST00000515144 CA10Q9NS85 328 aa12.44□□□□□ -0.42
TRIO-222ENST00000515144 MIOXQ9UGB7 285 aa12.44□□□□□ -0.42
TRIO-222ENST00000515144 KIAA1671Q9BY89 1806 aa12.44□□□□□ -0.42
TRIO-222ENST00000515144 SCTP09683 121 aa12.44□□□□□ -0.42
TRIO-222ENST00000515144 MVDP53602 400 aa12.44□□□□□ -0.42
TRIO-222ENST00000515144 CEACAM21Q3KPI0 293 aa12.44□□□□□ -0.42
TRIO-222ENST00000515144 UNQ5815/PRO19632Q6UWF5 114 aa12.44□□□□□ -0.42
TRIO-222ENST00000515144 SLC24A4Q8NFF2 622 aa12.44□□□□□ -0.42
TRIO-222ENST00000515144 SFT2D2O95562 160 aa12.44□□□□□ -0.42
TRIO-222ENST00000515144 WFDC6Q9BQY6 131 aa12.44□□□□□ -0.42
TRIO-222ENST00000515144 SRRQ9GZT4 340 aa12.44□□□□□ -0.42
TRIO-222ENST00000515144 TLNRD1Q9H1K6 362 aa12.44□□□□□ -0.42
TRIO-222ENST00000515144 LPAR3Q9UBY5 353 aa12.44□□□□□ -0.42
TRIO-222ENST00000515144 GATCO43716 136 aaKnown RBP12.44□□□□□ -0.42
TRIO-222ENST00000515144 ZCCHC24Q8N2G6 241 aaKnown RBP12.44□□□□□ -0.42
TRIO-222ENST00000515144 PGLYRP3Q96LB9 341 aa12.44□□□□□ -0.42
TRIO-222ENST00000515144 RAB40CQ96S21 281 aa12.44□□□□□ -0.42
TRIO-222ENST00000515144 SHANK1Q9Y566 2161 aa12.44□□□□□ -0.42
TRIO-222ENST00000515144 APOBEC3AP31941 199 aaPredicted RBP12.43□□□□□ -0.42
TRIO-222ENST00000515144 SNRPGP15A8MWD9 76 aa12.43□□□□□ -0.42
TRIO-222ENST00000515144 PLAUP00749 431 aa12.43□□□□□ -0.42
TRIO-222ENST00000515144 RD3LP0DJH9 198 aa12.43□□□□□ -0.42
TRIO-222ENST00000515144 PMCHP20382 165 aa12.43□□□□□ -0.42
TRIO-222ENST00000515144 GABRA6Q16445 453 aa12.43□□□□□ -0.42
TRIO-222ENST00000515144 ZNRF1Q8ND25 227 aa12.43□□□□□ -0.42
TRIO-222ENST00000515144 OR4A4PQ8NGN8 299 aa12.43□□□□□ -0.42
TRIO-222ENST00000515144 POM121Q96HA1 1249 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 256.1 ms