RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 PRRC2AP48634 2157 aaKnown RBP3.17□□□□□ -1.9
RFC1-216ENST00000514572 TRPM6Q9BX84 2022 aa3.16□□□□□ -1.9
RFC1-216ENST00000514572 TACC2O95359 2948 aa3.16□□□□□ -1.9
RFC1-216ENST00000514572 A0A1B0GTI1 187 aa3.16□□□□□ -1.9
RFC1-216ENST00000514572 TCAPO15273 167 aa3.16□□□□□ -1.9
RFC1-216ENST00000514572 RBFOX2O43251 390 aaKnown RBP eCLIP3.16□□□□□ -1.9
RFC1-216ENST00000514572 FOXH1O75593 365 aa3.16□□□□□ -1.9
RFC1-216ENST00000514572 CTDNEP1O95476 244 aa3.16□□□□□ -1.9
RFC1-216ENST00000514572 TNNC2P02585 160 aa3.16□□□□□ -1.9
RFC1-216ENST00000514572 C1GALT1C1LP0DN25 315 aa3.16□□□□□ -1.9
RFC1-216ENST00000514572 GTF2BQ00403 316 aa3.16□□□□□ -1.9
RFC1-216ENST00000514572 BAXQ07812 192 aa3.16□□□□□ -1.9
RFC1-216ENST00000514572 CEACAM21Q3KPI0 293 aa3.16□□□□□ -1.9
RFC1-216ENST00000514572 HES3Q5TGS1 186 aa3.16□□□□□ -1.9
RFC1-216ENST00000514572 CYP4Z1Q86W10 505 aa3.16□□□□□ -1.9
RFC1-216ENST00000514572 SLC25A29Q8N8R3 303 aa3.16□□□□□ -1.9
RFC1-216ENST00000514572 ACBD4Q8NC06 268 aa3.16□□□□□ -1.9
RFC1-216ENST00000514572 OR8G5Q8NG78 346 aa3.16□□□□□ -1.9
RFC1-216ENST00000514572 UBALD1Q8TB05 177 aa3.16□□□□□ -1.9
RFC1-216ENST00000514572 ANKRD36BP1Q96IX9 119 aa3.16□□□□□ -1.9
RFC1-216ENST00000514572 OR10C1Q96KK4 312 aa3.16□□□□□ -1.9
RFC1-216ENST00000514572 METTL26Q96S19 204 aa3.16□□□□□ -1.9
RFC1-216ENST00000514572 PKMYT1Q99640 499 aa3.16□□□□□ -1.9
RFC1-216ENST00000514572 CA10Q9NS85 328 aa3.16□□□□□ -1.9
RFC1-216ENST00000514572 PRO0628Q9UI54 55 aa3.16□□□□□ -1.9
RFC1-216ENST00000514572 MAP1AP78559 2803 aaPredicted RBP3.16□□□□□ -1.9
RFC1-216ENST00000514572 DIDO1Q9BTC0 2240 aaKnown RBP3.16□□□□□ -1.9
RFC1-216ENST00000514572 F8P00451 2351 aa3.16□□□□□ -1.9
RFC1-216ENST00000514572 PTPRJQ12913 1337 aa3.16□□□□□ -1.9
RFC1-216ENST00000514572 CNTRLQ7Z7A1 2325 aa3.15□□□□□ -1.9
RFC1-216ENST00000514572 NIPBLQ6KC79 2804 aaeCLIP3.15□□□□□ -1.91
RFC1-216ENST00000514572 A0A1B0GXF2 115 aa3.15□□□□□ -1.91
RFC1-216ENST00000514572 OR2AT4A6NND4 320 aa3.15□□□□□ -1.91
RFC1-216ENST00000514572 SMLR1H3BR10 107 aa3.15□□□□□ -1.91
RFC1-216ENST00000514572 COCHO43405 550 aa3.15□□□□□ -1.91
RFC1-216ENST00000514572 PLIN3O60664 434 aa3.15□□□□□ -1.91
RFC1-216ENST00000514572 GATBO75879 557 aaKnown RBP3.15□□□□□ -1.91
RFC1-216ENST00000514572 CCNKO75909 580 aa3.15□□□□□ -1.91
RFC1-216ENST00000514572 LINC00869P0C866 280 aa3.15□□□□□ -1.91
RFC1-216ENST00000514572 PSMB2P49721 201 aa3.15□□□□□ -1.91
RFC1-216ENST00000514572 XKP51811 444 aa3.15□□□□□ -1.91
RFC1-216ENST00000514572 GRB2P62993 217 aaKnown RBP3.15□□□□□ -1.91
RFC1-216ENST00000514572 PMVKQ15126 192 aa3.15□□□□□ -1.91
RFC1-216ENST00000514572 TRAM1Q15629 374 aa3.15□□□□□ -1.91
RFC1-216ENST00000514572 TIMM23BQ5SRD1 257 aa3.15□□□□□ -1.91
RFC1-216ENST00000514572 ZFP1Q6P2D0 407 aa3.15□□□□□ -1.91
RFC1-216ENST00000514572 TPGS1Q6ZTW0 290 aa3.15□□□□□ -1.91
RFC1-216ENST00000514572 LRRC6Q86X45 466 aa3.15□□□□□ -1.91
RFC1-216ENST00000514572 OR5T1Q8NG75 326 aa3.15□□□□□ -1.91
RFC1-216ENST00000514572 OR4M2Q8NGB6 313 aa3.15□□□□□ -1.91
RFC1-216ENST00000514572 CPNE4Q96A23 557 aaPredicted RBP3.15□□□□□ -1.91
RFC1-216ENST00000514572 LRRC45Q96CN5 670 aa3.15□□□□□ -1.91
RFC1-216ENST00000514572 ZMYND19Q96E35 227 aaPredicted RBP3.15□□□□□ -1.91
RFC1-216ENST00000514572 SRRQ9GZT4 340 aa3.15□□□□□ -1.91
RFC1-216ENST00000514572 LHX5Q9H2C1 402 aa3.15□□□□□ -1.91
RFC1-216ENST00000514572 RAB26Q9ULW5 256 aa3.15□□□□□ -1.91
RFC1-216ENST00000514572 PUS1Q9Y606 427 aaKnown RBP eCLIP3.15□□□□□ -1.91
RFC1-216ENST00000514572 RFNGQ9Y644 331 aa3.15□□□□□ -1.91
RFC1-216ENST00000514572 CELSR1Q9NYQ6 3014 aa3.15□□□□□ -1.91
RFC1-216ENST00000514572 MED13Q9UHV7 2174 aa3.15□□□□□ -1.91
RFC1-216ENST00000514572 FBN2P35556 2912 aa3.15□□□□□ -1.91
RFC1-216ENST00000514572 PCNX1Q96RV3 2341 aa3.14□□□□□ -1.91
RFC1-216ENST00000514572 CSMD1Q96PZ7 3565 aa3.14□□□□□ -1.91
RFC1-216ENST00000514572 PLXNA2O75051 1894 aa3.14□□□□□ -1.91
RFC1-216ENST00000514572 SVILO95425 2214 aa3.14□□□□□ -1.91
RFC1-216ENST00000514572 IGHV3-49A0A0A0MS15 119 aa3.14□□□□□ -1.91
RFC1-216ENST00000514572 TMEM72A0PK05 275 aa3.14□□□□□ -1.91
RFC1-216ENST00000514572 F8VZ95 297 aa3.14□□□□□ -1.91
RFC1-216ENST00000514572 GOLGA8RI6L899 631 aa3.14□□□□□ -1.91
RFC1-216ENST00000514572 TNFAIP8O95379 198 aa3.14□□□□□ -1.91
RFC1-216ENST00000514572 ADRA2AP08913 450 aa3.14□□□□□ -1.91
RFC1-216ENST00000514572 ZNF35P13682 527 aa3.14□□□□□ -1.91
RFC1-216ENST00000514572 GCLMP48507 274 aa3.14□□□□□ -1.91
RFC1-216ENST00000514572 TTPAP49638 278 aa3.14□□□□□ -1.91
RFC1-216ENST00000514572 ELF3P78545 371 aaPredicted RBP3.14□□□□□ -1.91
RFC1-216ENST00000514572 PRKCDQ05655 676 aa3.14□□□□□ -1.91
RFC1-216ENST00000514572 TMEM249Q2WGJ8 235 aa3.14□□□□□ -1.91
RFC1-216ENST00000514572 YIF1BQ5BJH7 314 aa3.14□□□□□ -1.91
RFC1-216ENST00000514572 OR10J3Q5JRS4 329 aa3.14□□□□□ -1.91
RFC1-216ENST00000514572 CLEC12AQ5QGZ9 265 aa3.14□□□□□ -1.91
RFC1-216ENST00000514572 RBM48Q5RL73 367 aaKnown RBP3.14□□□□□ -1.91
RFC1-216ENST00000514572 ZNF720Q7Z2F6 126 aa3.14□□□□□ -1.91
RFC1-216ENST00000514572 PRNTQ86SH4 94 aa3.14□□□□□ -1.91
RFC1-216ENST00000514572 ENTHD1Q8IYW4 607 aa3.14□□□□□ -1.91
RFC1-216ENST00000514572 RNF10Q8N5U6 811 aaKnown RBP3.14□□□□□ -1.91
RFC1-216ENST00000514572 CCNYL1Q8N7R7 359 aa3.14□□□□□ -1.91
RFC1-216ENST00000514572 SLC25A46Q96AG3 418 aa3.14□□□□□ -1.91
RFC1-216ENST00000514572 QKIQ96PU8 341 aaKnown RBP eCLIP3.14□□□□□ -1.91
RFC1-216ENST00000514572 RNF5Q99942 180 aa3.14□□□□□ -1.91
RFC1-216ENST00000514572 RBM22Q9NW64 420 aaKnown RBP eCLIP3.14□□□□□ -1.91
RFC1-216ENST00000514572 OPN4Q9UHM6 478 aa3.14□□□□□ -1.91
RFC1-216ENST00000514572 ADGRG4Q8IZF6 3080 aa3.13□□□□□ -1.91
RFC1-216ENST00000514572 FAM92AA1XBS5 289 aa3.13□□□□□ -1.91
RFC1-216ENST00000514572 TOR1AO14656 332 aa3.13□□□□□ -1.91
RFC1-216ENST00000514572 FFAR1O14842 300 aa3.13□□□□□ -1.91
RFC1-216ENST00000514572 CRXO43186 299 aaPredicted RBP3.13□□□□□ -1.91
RFC1-216ENST00000514572 NELFEP18615 380 aaKnown RBP3.13□□□□□ -1.91
RFC1-216ENST00000514572 TSPOP30536 169 aa3.13□□□□□ -1.91
RFC1-216ENST00000514572 RPA3P35244 121 aaPredicted RBP3.13□□□□□ -1.91
RFC1-216ENST00000514572 SLC18A1P54219 525 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms