RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 CRYM-AS1A6NIL9 109 aa13.27□□□□□ -0.29
NUP54-214ENST00000514307 MPPED1O15442 326 aa13.27□□□□□ -0.29
NUP54-214ENST00000514307 YPEL1O60688 119 aa13.27□□□□□ -0.29
NUP54-214ENST00000514307 RNF224P0DH78 156 aa13.27□□□□□ -0.29
NUP54-214ENST00000514307 GNRHRP30968 328 aa13.27□□□□□ -0.29
NUP54-214ENST00000514307 CDKN1AP38936 164 aa13.27□□□□□ -0.29
NUP54-214ENST00000514307 CD83Q01151 205 aa13.27□□□□□ -0.29
NUP54-214ENST00000514307 LY6G6FQ5SQ64 297 aa13.27□□□□□ -0.29
NUP54-214ENST00000514307 CLEC18BQ6UXF7 455 aa13.27□□□□□ -0.29
NUP54-214ENST00000514307 C5orf24Q7Z6I8 188 aa13.27□□□□□ -0.29
NUP54-214ENST00000514307 CLEC18CQ8NCF0 446 aa13.27□□□□□ -0.29
NUP54-214ENST00000514307 OR8B3Q8NGG8 313 aa13.27□□□□□ -0.29
NUP54-214ENST00000514307 OR52L2PQ8NGH6 319 aa13.27□□□□□ -0.29
NUP54-214ENST00000514307 CASTOR1Q8WTX7 329 aa13.27□□□□□ -0.29
NUP54-214ENST00000514307 H1FXQ92522 213 aaKnown RBP13.27□□□□□ -0.29
NUP54-214ENST00000514307 NEIL1Q96FI4 390 aaPredicted RBP13.27□□□□□ -0.29
NUP54-214ENST00000514307 YPEL2Q96QA6 119 aa13.27□□□□□ -0.29
NUP54-214ENST00000514307 OR8B2Q96RD0 313 aa13.27□□□□□ -0.29
NUP54-214ENST00000514307 SUCNR1Q9BXA5 334 aa13.27□□□□□ -0.29
NUP54-214ENST00000514307 ZNF436Q9C0F3 470 aaPredicted RBP13.27□□□□□ -0.29
NUP54-214ENST00000514307 FXYD6Q9H0Q3 95 aa13.27□□□□□ -0.29
NUP54-214ENST00000514307 BARX1Q9HBU1 254 aaPredicted RBP13.27□□□□□ -0.29
NUP54-214ENST00000514307 OR1A1Q9P1Q5 309 aa13.27□□□□□ -0.29
NUP54-214ENST00000514307 GNG12Q9UBI6 72 aa13.27□□□□□ -0.29
NUP54-214ENST00000514307 HIVEP3Q5T1R4 2406 aa13.27□□□□□ -0.29
NUP54-214ENST00000514307 RNF212BA8MTL3 300 aa13.26□□□□□ -0.29
NUP54-214ENST00000514307 ITGB1BP1O14713 200 aa13.26□□□□□ -0.29
NUP54-214ENST00000514307 SNAPC5O75971 98 aa13.26□□□□□ -0.29
NUP54-214ENST00000514307 WNT2P09544 360 aa13.26□□□□□ -0.29
NUP54-214ENST00000514307 OR8U9P0C7N5 309 aa13.26□□□□□ -0.29
NUP54-214ENST00000514307 HLA-GP17693 338 aa13.26□□□□□ -0.29
NUP54-214ENST00000514307 GPR6P46095 362 aaPredicted RBP13.26□□□□□ -0.29
NUP54-214ENST00000514307 SRPXP78539 464 aa13.26□□□□□ -0.29
NUP54-214ENST00000514307 TCTE3Q8IZS6 198 aa13.26□□□□□ -0.29
NUP54-214ENST00000514307 OR8U1Q8NH10 309 aa13.26□□□□□ -0.29
NUP54-214ENST00000514307 TMEM230Q96A57 120 aa13.26□□□□□ -0.29
NUP54-214ENST00000514307 ST6GAL2Q96JF0 529 aa13.26□□□□□ -0.29
NUP54-214ENST00000514307 CCL19Q99731 98 aa13.26□□□□□ -0.29
NUP54-214ENST00000514307 DCTN5Q9BTE1 182 aa13.26□□□□□ -0.29
NUP54-214ENST00000514307 NAA60Q9H7X0 242 aa13.26□□□□□ -0.29
NUP54-214ENST00000514307 CCL28Q9NRJ3 127 aa13.26□□□□□ -0.29
NUP54-214ENST00000514307 SLC2A9Q9NRM0 540 aa13.26□□□□□ -0.29
NUP54-214ENST00000514307 IDI2-AS1Q9NZ38 188 aa13.26□□□□□ -0.29
NUP54-214ENST00000514307 DOPEY2Q9Y3R5 2298 aa13.26□□□□□ -0.29
NUP54-214ENST00000514307 CLDN1O95832 211 aa13.25□□□□□ -0.29
NUP54-214ENST00000514307 SELLP14151 372 aa13.25□□□□□ -0.29
NUP54-214ENST00000514307 RPS2P15880 293 aaKnown RBP13.25□□□□□ -0.29
NUP54-214ENST00000514307 SSTR5P35346 364 aa13.25□□□□□ -0.29
NUP54-214ENST00000514307 RAP2BP61225 183 aa13.25□□□□□ -0.29
NUP54-214ENST00000514307 CYCSP99999 105 aaKnown RBP13.25□□□□□ -0.29
NUP54-214ENST00000514307 MORN2Q502X0 79 aa13.25□□□□□ -0.29
NUP54-214ENST00000514307 PHLDA2Q53GA4 152 aa13.25□□□□□ -0.29
NUP54-214ENST00000514307 TMEM200BQ69YZ2 307 aa13.25□□□□□ -0.29
NUP54-214ENST00000514307 BVESQ8NE79 360 aa13.25□□□□□ -0.29
NUP54-214ENST00000514307 OR11H7Q8NGC8 314 aa13.25□□□□□ -0.29
NUP54-214ENST00000514307 GALNT14Q96FL9 552 aa13.25□□□□□ -0.29
NUP54-214ENST00000514307 RANGRFQ9HD47 186 aaPredicted RBP13.25□□□□□ -0.29
NUP54-214ENST00000514307 UBR5O95071 2799 aaPredicted RBP13.25□□□□□ -0.29
NUP54-214ENST00000514307 C3orf85A0A1B0GTC6 90 aa13.24□□□□□ -0.29
NUP54-214ENST00000514307 A0A1B0GW55 424 aa13.24□□□□□ -0.29
NUP54-214ENST00000514307 hCG_1809904A0A1W2PP81 198 aa13.24□□□□□ -0.29
NUP54-214ENST00000514307 A0A1W2PPE2 198 aa13.24□□□□□ -0.29
NUP54-214ENST00000514307 A0A1W2PR64 198 aa13.24□□□□□ -0.29
NUP54-214ENST00000514307 A0A1W2PRV1 198 aa13.24□□□□□ -0.29
NUP54-214ENST00000514307 HSD17B6O14756 317 aa13.24□□□□□ -0.29
NUP54-214ENST00000514307 PGLYRP1O75594 196 aaPredicted RBP13.24□□□□□ -0.29
NUP54-214ENST00000514307 OR2A4O95047 310 aa13.24□□□□□ -0.29
NUP54-214ENST00000514307 IFNA21P01568 189 aa13.24□□□□□ -0.29
NUP54-214ENST00000514307 DUX4L2P0CJ85 424 aa13.24□□□□□ -0.29
NUP54-214ENST00000514307 DUX4L3P0CJ86 424 aa13.24□□□□□ -0.29
NUP54-214ENST00000514307 DUX4L4P0CJ87 422 aa13.24□□□□□ -0.29
NUP54-214ENST00000514307 DUX4L5P0CJ88 424 aa13.24□□□□□ -0.29
NUP54-214ENST00000514307 DUX4L6P0CJ89 424 aa13.24□□□□□ -0.29
NUP54-214ENST00000514307 DUX4L7P0CJ90 424 aa13.24□□□□□ -0.29
NUP54-214ENST00000514307 RAB7AP51149 207 aa13.24□□□□□ -0.29
NUP54-214ENST00000514307 SLC9A3R2Q15599 337 aa13.24□□□□□ -0.29
NUP54-214ENST00000514307 C17orf58Q2M2W7 97 aa13.24□□□□□ -0.29
NUP54-214ENST00000514307 ZFP69Q49AA0 526 aa13.24□□□□□ -0.29
NUP54-214ENST00000514307 AVPI1Q5T686 147 aa13.24□□□□□ -0.29
NUP54-214ENST00000514307 DUX4L9Q6RFH8 374 aaPredicted RBP13.24□□□□□ -0.29
NUP54-214ENST00000514307 LDLRAD3Q86YD5 345 aa13.24□□□□□ -0.29
NUP54-214ENST00000514307 UBALD1Q8TB05 177 aa13.24□□□□□ -0.29
NUP54-214ENST00000514307 ZNF714Q96N38 554 aa13.24□□□□□ -0.29
NUP54-214ENST00000514307 OR2A7Q96R45 310 aa13.24□□□□□ -0.29
NUP54-214ENST00000514307 RANBP3Q9H6Z4 567 aaPredicted RBP13.24□□□□□ -0.29
NUP54-214ENST00000514307 METTL8Q9H825 291 aaKnown RBP13.24□□□□□ -0.29
NUP54-214ENST00000514307 PATZ1Q9HBE1 687 aaKnown RBP13.24□□□□□ -0.29
NUP54-214ENST00000514307 RAB18Q9NP72 206 aa13.24□□□□□ -0.29
NUP54-214ENST00000514307 DUX4Q9UBX2 424 aa13.24□□□□□ -0.29
NUP54-214ENST00000514307 PLCE1Q9P212 2302 aa13.24□□□□□ -0.29
NUP54-214ENST00000514307 DYSFO75923 2080 aa13.24□□□□□ -0.29
NUP54-214ENST00000514307 IGKV1D-13A0A0B4J2D9 117 aa13.23□□□□□ -0.29
NUP54-214ENST00000514307 A1L4Q6 167 aa13.23□□□□□ -0.29
NUP54-214ENST00000514307 GOSR2O14653 212 aa13.23□□□□□ -0.29
NUP54-214ENST00000514307 GIPP09681 153 aaPredicted RBP13.23□□□□□ -0.29
NUP54-214ENST00000514307 IGKV1-13P0DP09 117 aa13.23□□□□□ -0.29
NUP54-214ENST00000514307 CXCL3P19876 107 aa13.23□□□□□ -0.29
NUP54-214ENST00000514307 PPP1CCP36873 323 aaKnown RBP13.23□□□□□ -0.29
NUP54-214ENST00000514307 PDLIM4P50479 330 aa13.23□□□□□ -0.29
NUP54-214ENST00000514307 SUPT4H1P63272 117 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms